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The map label for this gene is insD1 [C]

Identifier: 108763922

GI number: 108763922

Start: 2457315

End: 2458196

Strand: Reverse

Name: insD1 [C]

Synonym: MXAN_2122

Alternate gene names: 108763922

Gene position: 2458196-2457315 (Counterclockwise)

Preceding gene: 108758243

Following gene: 108759603

Centisome position: 26.9

GC content: 67.35

Gene sequence:

>882_bases
ATGGTGAGCGCGCCTGTCCGCCGTCGGCAGGTGCGGTACGCCATGGGGAAAGGCGTGTCGCAGCGCCGGGCGTGCGCGCT
ACTCCAGGTGGCCGGCAGTAGCCTGGGCTACGCCAGCCGGAAAGAGGCAAAGGACGCGGCTCTGGTGGCGCAGTTGCGCG
ACATCGCCCGGGCACGCCCCCGGTTCGGCTACCGTCGGGCCTGGGCCCTGCTGCGGCGCGAGGGGCCCGCGGTCAACGTG
AAGCGAGTGCATCGGCTCTGGAGGAAGGAGGGACTGGCGCTCTCTCGGAGACGGCCAAGGAAACGGCTTCGGCTGGGGCA
GCAACGCCAACCCAAGCCGGAGGGCGTCAACTCGGTATGGGCCTGGGACTTCGTGCACGACAGGTGCGCAAATGGGCAGA
AGCTCAAGTGCCTCACTGTCGTGGATGAACACAGCCGAGAGTGCCTGGCCATCGACGTGGCCGGGCGCATCAGTGCCAGG
CGCGTCATCGAGGTGCTCTCGCGCCTGGTAGCAGTGCACGGGCCGCCGAAGTACCTCAGAAGCGACAACGGCCCCGAGTT
CATCGCCAAGGCCCTGCGCAGGTGGCTGGAGGCCAATGGCATTCAGACGGCCTACATCGCTCCAGGCAAGCCCTGGCAGA
ACGGTACCAACGAAAGCTTCAACGGCCGCTTCCGGGACGAGTGCCTGTCAGCGGAGTGGTTTTCCACCAGGAGGGAGGCC
GTCGTCCTCATCGAGGCGTGGCGGCGCGACTACAACGAGAAGCGCCCGCACAGCAGTTTGGGCTACAAGACACCTGCGGA
GGTCGGAGCTCGCCGTGCCCATGCCGGCCCCGTCGCATCATCCCTCGAGCACGGCATCAGCAGCGCCGCAGGACTCTCGT
AA

Upstream 100 bases:

>100_bases
CGCGGCTCAGGGAGTTGGAGAAGGAGAACGCGCGTCTGAAGAAGCTGCTGGCCGAGAGGGACCTCGAAATCGAGGTCATG
AAGGAAATCTCCACAAAAAA

Downstream 100 bases:

>100_bases
CGCGTGGTCCGAAGAACGGGGGCAGAGCACAGCCGCGCTCACCGCGCCTGGCCCCACCATCCGCTTCACCATCTCCGCCT
TGAATGCATCCGTGTACGAC

Product: IS5 family transposase orfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MVSAPVRRRQVRYAMGKGVSQRRACALLQVAGSSLGYASRKEAKDAALVAQLRDIARARPRFGYRRAWALLRREGPAVNV
KRVHRLWRKEGLALSRRRPRKRLRLGQQRQPKPEGVNSVWAWDFVHDRCANGQKLKCLTVVDEHSRECLAIDVAGRISAR
RVIEVLSRLVAVHGPPKYLRSDNGPEFIAKALRRWLEANGIQTAYIAPGKPWQNGTNESFNGRFRDECLSAEWFSTRREA
VVLIEAWRRDYNEKRPHSSLGYKTPAEVGARRAHAGPVASSLEHGISSAAGLS

Sequences:

>Translated_293_residues
MVSAPVRRRQVRYAMGKGVSQRRACALLQVAGSSLGYASRKEAKDAALVAQLRDIARARPRFGYRRAWALLRREGPAVNV
KRVHRLWRKEGLALSRRRPRKRLRLGQQRQPKPEGVNSVWAWDFVHDRCANGQKLKCLTVVDEHSRECLAIDVAGRISAR
RVIEVLSRLVAVHGPPKYLRSDNGPEFIAKALRRWLEANGIQTAYIAPGKPWQNGTNESFNGRFRDECLSAEWFSTRREA
VVLIEAWRRDYNEKRPHSSLGYKTPAEVGARRAHAGPVASSLEHGISSAAGLS
>Mature_293_residues
MVSAPVRRRQVRYAMGKGVSQRRACALLQVAGSSLGYASRKEAKDAALVAQLRDIARARPRFGYRRAWALLRREGPAVNV
KRVHRLWRKEGLALSRRRPRKRLRLGQQRQPKPEGVNSVWAWDFVHDRCANGQKLKCLTVVDEHSRECLAIDVAGRISAR
RVIEVLSRLVAVHGPPKYLRSDNGPEFIAKALRRWLEANGIQTAYIAPGKPWQNGTNESFNGRFRDECLSAEWFSTRREA
VVLIEAWRRDYNEKRPHSSLGYKTPAEVGARRAHAGPVASSLEHGISSAAGLS

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789424, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789224, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788305, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787669, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786558, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789981, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786462, Length=158, Percent_Identity=29.746835443038, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33027; Mature: 33027

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAPVRRRQVRYAMGKGVSQRRACALLQVAGSSLGYASRKEAKDAALVAQLRDIARARP
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
RFGYRRAWALLRREGPAVNVKRVHRLWRKEGLALSRRRPRKRLRLGQQRQPKPEGVNSVW
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCCCCCCCCCEE
AWDFVHDRCANGQKLKCLTVVDEHSRECLAIDVAGRISARRVIEVLSRLVAVHGPPKYLR
HHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHC
SDNGPEFIAKALRRWLEANGIQTAYIAPGKPWQNGTNESFNGRFRDECLSAEWFSTRREA
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
VVLIEAWRRDYNEKRPHSSLGYKTPAEVGARRAHAGPVASSLEHGISSAAGLS
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSAPVRRRQVRYAMGKGVSQRRACALLQVAGSSLGYASRKEAKDAALVAQLRDIARARP
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
RFGYRRAWALLRREGPAVNVKRVHRLWRKEGLALSRRRPRKRLRLGQQRQPKPEGVNSVW
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCCCCCCCCCEE
AWDFVHDRCANGQKLKCLTVVDEHSRECLAIDVAGRISARRVIEVLSRLVAVHGPPKYLR
HHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHC
SDNGPEFIAKALRRWLEANGIQTAYIAPGKPWQNGTNESFNGRFRDECLSAEWFSTRREA
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
VVLIEAWRRDYNEKRPHSSLGYKTPAEVGARRAHAGPVASSLEHGISSAAGLS
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]