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The map label for this gene is yoqW [H]

Identifier: 108763917

GI number: 108763917

Start: 6445804

End: 6446478

Strand: Reverse

Name: yoqW [H]

Synonym: MXAN_5161

Alternate gene names: 108763917

Gene position: 6446478-6445804 (Counterclockwise)

Preceding gene: 108762658

Following gene: 108759580

Centisome position: 70.53

GC content: 67.56

Gene sequence:

>675_bases
ATGTGTGGCCGTGTCACCGTCCGAACTTCTCCTGAGCAGATTGTCACCGGGCTGGGCCTCGCGGGCATCCGTACCGCGGT
GGAACGCCCGCGCTTCAATCTCTGTCCCACGCAGTTGATGCCCGTGGTGACCAACGATGGCGCGCGGATGCTGGATGCCT
TCCGCTGGGGGCTCGTCCCGTCGTGGGCGAAGGACCCCGCCATTGGCAACAAGCTCATCAACGCACGGGGCGAGACAGTG
GCGGAGAAGCCCAGCTTCCGCTCCGCGCTCAAGCGGCGCCGTTGCCTCGTCGTGGTGGATGGCTGGTACGAGTGGAAGCA
GTCCACGAAGCCGAAGACGCCGTACTACTTCCACCGCAAGGACGGGCAGCTCCTGACGCTCGCGGGGCTGTGGGAAGAGT
GGACCGCGCCCGACACGGGCGAGGTGCTCAACACCTGCACCCTCATCACCATCGGGCCCAACGCGCTGATGGCGCCCATC
CATGACCGGATGCCCGTCATCCTCGAGCCGGAGGCCCAGGAGGTGTGGCTGCGTCCGGAGCCGCAGGAGTCCTCGGTGCT
GCTCCCGCTGCTGGTGCCCTGCGCCGAGGAGGCGCTGGACGTCTACGAGGTGTCGCGCGTGGTGAACTCCCCTGCCAACG
ACACCCCGGAGTGTGTGGAACGCGTGGCCGCCTGA

Upstream 100 bases:

>100_bases
TCATACTGTCCATGCTACCGCAGCGGCCCCCCGCCTGTTTGGCTGCACTGGCAAGGCGTCTTCTTGGGCATTCGGCCAGC
CAGGGCGATACTTCCTGCCC

Downstream 100 bases:

>100_bases
TTCGCGTGACTCAGGCGCGACGGCGGACCTTCGCGTCGAGGCTCCACGGCCCCGCGCCGATGAGCGCGATTCCGGCCATG
ACGGCGAGGTAGAGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MCGRVTVRTSPEQIVTGLGLAGIRTAVERPRFNLCPTQLMPVVTNDGARMLDAFRWGLVPSWAKDPAIGNKLINARGETV
AEKPSFRSALKRRRCLVVVDGWYEWKQSTKPKTPYYFHRKDGQLLTLAGLWEEWTAPDTGEVLNTCTLITIGPNALMAPI
HDRMPVILEPEAQEVWLRPEPQESSVLLPLLVPCAEEALDVYEVSRVVNSPANDTPECVERVAA

Sequences:

>Translated_224_residues
MCGRVTVRTSPEQIVTGLGLAGIRTAVERPRFNLCPTQLMPVVTNDGARMLDAFRWGLVPSWAKDPAIGNKLINARGETV
AEKPSFRSALKRRRCLVVVDGWYEWKQSTKPKTPYYFHRKDGQLLTLAGLWEEWTAPDTGEVLNTCTLITIGPNALMAPI
HDRMPVILEPEAQEVWLRPEPQESSVLLPLLVPCAEEALDVYEVSRVVNSPANDTPECVERVAA
>Mature_224_residues
MCGRVTVRTSPEQIVTGLGLAGIRTAVERPRFNLCPTQLMPVVTNDGARMLDAFRWGLVPSWAKDPAIGNKLINARGETV
AEKPSFRSALKRRRCLVVVDGWYEWKQSTKPKTPYYFHRKDGQLLTLAGLWEEWTAPDTGEVLNTCTLITIGPNALMAPI
HDRMPVILEPEAQEVWLRPEPQESSVLLPLLVPCAEEALDVYEVSRVVNSPANDTPECVERVAA

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=270, Percent_Identity=32.5925925925926, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI54607104, Length=270, Percent_Identity=32.5925925925926, Blast_Score=114, Evalue=6e-26,
Organism=Escherichia coli, GI48994894, Length=230, Percent_Identity=29.5652173913043, Blast_Score=98, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6323761, Length=199, Percent_Identity=33.1658291457286, Blast_Score=99, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21355761, Length=222, Percent_Identity=27.4774774774775, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24959; Mature: 24959

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRVTVRTSPEQIVTGLGLAGIRTAVERPRFNLCPTQLMPVVTNDGARMLDAFRWGLVP
CCCCEEEECCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHHHCCCC
SWAKDPAIGNKLINARGETVAEKPSFRSALKRRRCLVVVDGWYEWKQSTKPKTPYYFHRK
CCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEECCHHHHHCCCCCCCEEEECC
DGQLLTLAGLWEEWTAPDTGEVLNTCTLITIGPNALMAPIHDRMPVILEPEAQEVWLRPE
CCCEEEEEECHHHCCCCCCHHHHHEEEEEEECCCCEECCCCCCCCEEECCCHHHCCCCCC
PQESSVLLPLLVPCAEEALDVYEVSRVVNSPANDTPECVERVAA
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MCGRVTVRTSPEQIVTGLGLAGIRTAVERPRFNLCPTQLMPVVTNDGARMLDAFRWGLVP
CCCCEEEECCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHEEEEECCCHHHHHHHHHCCCC
SWAKDPAIGNKLINARGETVAEKPSFRSALKRRRCLVVVDGWYEWKQSTKPKTPYYFHRK
CCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEECCHHHHHCCCCCCCEEEECC
DGQLLTLAGLWEEWTAPDTGEVLNTCTLITIGPNALMAPIHDRMPVILEPEAQEVWLRPE
CCCEEEEEECHHHCCCCCCHHHHHEEEEEEECCCCEECCCCCCCCEEECCCHHHCCCCCC
PQESSVLLPLLVPCAEEALDVYEVSRVVNSPANDTPECVERVAA
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]