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The map label for this gene is ybhR [C]

Identifier: 108763898

GI number: 108763898

Start: 1876759

End: 1877784

Strand: Direct

Name: ybhR [C]

Synonym: MXAN_1598

Alternate gene names: 108763898

Gene position: 1876759-1877784 (Clockwise)

Preceding gene: 108761260

Following gene: 108762863

Centisome position: 20.53

GC content: 70.66

Gene sequence:

>1026_bases
ATGAACGCCCTGGGCCAGTTGGTGTTGATGCGGCTGCGCATGTTGATGCGGCAGCCGGAGGTGCTGTTCTGGACGTTCAT
CTTCCCCGTCGTCACCTCGCTGTTCCTGGGGCTGGCGTTCCGGAATGACTCCCTGGGCCCGGTGCGTGTGGCCGTGGCGG
AGGGGGCGGGCGCGCCGGCGCTGATGGCGAAGCTGGAGGGCGTGCCGGAGCTGTCGGCCGAGGTCGTGGACGAAGCGTCC
GCCCGGCGGCGGCTGGCGCGCGGGCAGCTCTCCCTGGTGCTGCTGCCGGGCGCGGTGCCCGAGGCGCTGGTGGACCCCAG
CCAGGCGGAGGGCCGCACCGCGCGGCTCCTGGTGGAGCAGGCGCTCGCCGCGCCGGAAGACGCCGCGCGTCCCGCCGTGG
TGAAGGCCACGCCGGTGTCGGAGCCGGGAAACCGCTACGTCGACTTCCTCATCCCCGGCCTGCTGGGCCTGTCGTTGATG
TCCAGCAGCCTGTGGGTGGTGGCGGGCTCGCTGGTGGCGATGCGCGGAGGCAAGCTGCTGAAGCGGCTGGCCGCGACGCC
CATGCGGCGCTCCCAGTTCTTCCTGTCCTACATGCTGGCGCGCGCGGGGTTCGCGCTGGCGGAAATCCTCTTCTTCTGTG
CCTTCGCGCGCTGGCTCTTCGGCGTGCCGATGTTCGGCAGCTACTTCACATTGACGCTGGTGGGGCTCGCGGGGGCGCTG
TGCTTCGCCGCGCTCGGCGTGCTGGTGGCCAGCCGGGCGCGGACGGAGGAGGCGGTGGGCGGGCTCGTCAACCTCGTCTC
GCTGCCGATGATGTTCGTCTCCGGCGTCTTCTTTGCGGCCGGAAACTTCCCCTCTTGGTTGCAGCCGGTCATCCGCGCCT
TGCCGCTCACGGCCATCAATGACTCGCTGCGGGCTGTCATGCTGGAGGGCGCGGGCCTGGCTTCACTGGGTGCGCCCATG
TTGGTGCTGGCCGCGTGGACCGTGGTGCCGCTGCTGCTGGCTCTTCGTTGGTTCCGCTGGACGTAA

Upstream 100 bases:

>100_bases
AGTTGCTGCACCTGTCCACCCGGCGCCCCACGCTGGATGATGTCTTCATCGACATGACGGGCCGCTCCCTGCGCGAGTCC
GCGGAAGAGAAGGCGGCCTG

Downstream 100 bases:

>100_bases
AGGAGCGCTGCTTCGTGTCACAGCCCGTTTCCGCGCCGTCCCCCGCCTTCGTTCAGCAGCTCAACTTCCACGCGCGAGAC
GCCAGCAACGAAGCGGCGGC

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Permease; ABC-Type Transporter Permease Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; Abc Transporter Permease Protein Abc-2 Family; ABC-Type Multidrug Transport System Permease Protein; Multidrug ABC Transporter Permease; Abc-2 Type Transporter

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNALGQLVLMRLRMLMRQPEVLFWTFIFPVVTSLFLGLAFRNDSLGPVRVAVAEGAGAPALMAKLEGVPELSAEVVDEAS
ARRRLARGQLSLVLLPGAVPEALVDPSQAEGRTARLLVEQALAAPEDAARPAVVKATPVSEPGNRYVDFLIPGLLGLSLM
SSSLWVVAGSLVAMRGGKLLKRLAATPMRRSQFFLSYMLARAGFALAEILFFCAFARWLFGVPMFGSYFTLTLVGLAGAL
CFAALGVLVASRARTEEAVGGLVNLVSLPMMFVSGVFFAAGNFPSWLQPVIRALPLTAINDSLRAVMLEGAGLASLGAPM
LVLAAWTVVPLLLALRWFRWT

Sequences:

>Translated_341_residues
MNALGQLVLMRLRMLMRQPEVLFWTFIFPVVTSLFLGLAFRNDSLGPVRVAVAEGAGAPALMAKLEGVPELSAEVVDEAS
ARRRLARGQLSLVLLPGAVPEALVDPSQAEGRTARLLVEQALAAPEDAARPAVVKATPVSEPGNRYVDFLIPGLLGLSLM
SSSLWVVAGSLVAMRGGKLLKRLAATPMRRSQFFLSYMLARAGFALAEILFFCAFARWLFGVPMFGSYFTLTLVGLAGAL
CFAALGVLVASRARTEEAVGGLVNLVSLPMMFVSGVFFAAGNFPSWLQPVIRALPLTAINDSLRAVMLEGAGLASLGAPM
LVLAAWTVVPLLLALRWFRWT
>Mature_341_residues
MNALGQLVLMRLRMLMRQPEVLFWTFIFPVVTSLFLGLAFRNDSLGPVRVAVAEGAGAPALMAKLEGVPELSAEVVDEAS
ARRRLARGQLSLVLLPGAVPEALVDPSQAEGRTARLLVEQALAAPEDAARPAVVKATPVSEPGNRYVDFLIPGLLGLSLM
SSSLWVVAGSLVAMRGGKLLKRLAATPMRRSQFFLSYMLARAGFALAEILFFCAFARWLFGVPMFGSYFTLTLVGLAGAL
CFAALGVLVASRARTEEAVGGLVNLVSLPMMFVSGVFFAAGNFPSWLQPVIRALPLTAINDSLRAVMLEGAGLASLGAPM
LVLAAWTVVPLLLALRWFRWT

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36486; Mature: 36486

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALGQLVLMRLRMLMRQPEVLFWTFIFPVVTSLFLGLAFRNDSLGPVRVAVAEGAGAPA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
LMAKLEGVPELSAEVVDEASARRRLARGQLSLVLLPGAVPEALVDPSQAEGRTARLLVEQ
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHH
ALAAPEDAARPAVVKATPVSEPGNRYVDFLIPGLLGLSLMSSSLWVVAGSLVAMRGGKLL
HHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLAATPMRRSQFFLSYMLARAGFALAEILFFCAFARWLFGVPMFGSYFTLTLVGLAGAL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
CFAALGVLVASRARTEEAVGGLVNLVSLPMMFVSGVFFAAGNFPSWLQPVIRALPLTAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
DSLRAVMLEGAGLASLGAPMLVLAAWTVVPLLLALRWFRWT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNALGQLVLMRLRMLMRQPEVLFWTFIFPVVTSLFLGLAFRNDSLGPVRVAVAEGAGAPA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
LMAKLEGVPELSAEVVDEASARRRLARGQLSLVLLPGAVPEALVDPSQAEGRTARLLVEQ
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCHHHHHHHHH
ALAAPEDAARPAVVKATPVSEPGNRYVDFLIPGLLGLSLMSSSLWVVAGSLVAMRGGKLL
HHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLAATPMRRSQFFLSYMLARAGFALAEILFFCAFARWLFGVPMFGSYFTLTLVGLAGAL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
CFAALGVLVASRARTEEAVGGLVNLVSLPMMFVSGVFFAAGNFPSWLQPVIRALPLTAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
DSLRAVMLEGAGLASLGAPMLVLAAWTVVPLLLALRWFRWT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA