Click here to switch to the map view.

The map label for this gene is yfhF [C]

Identifier: 108763866

GI number: 108763866

Start: 3013213

End: 3013539

Strand: Direct

Name: yfhF [C]

Synonym: MXAN_2589

Alternate gene names: 108763866

Gene position: 3013213-3013539 (Clockwise)

Preceding gene: 108763056

Following gene: 108757838

Centisome position: 32.97

GC content: 63.61

Gene sequence:

>327_bases
GTGGCCGTGCGCCTGACGGATGCCGCCATCCAGCAGGTGAAAAGCGTCATCACGGCCCAAGGCTTCGAGGGCTACTTCTT
CTCCATCCGCGTGGTGCCCGCTGGCTGCAGCGGCCTGGGCTATGACTTGAACCTGGTCAAGGAGTCCAAGGCCGGTGACA
CCGTCTGGGAGCAGGACGGCGTGAAGATCGCCTCCGACCCGATGAGCAGCCAGTACCTCGGGGGCACGGAGATTGACTAC
GTCTCCGCCATCACCGGTTCGGGCTTCAAGTTCAACAACCCGAACGCGAAGTCCTCCTGCGGCTGCGGCACGTCGTTCAC
GACCTGA

Upstream 100 bases:

>100_bases
GCCCGGGCGTTATAAGTCCCCTAGAGGAGACATGGATATGGACAGCACCCCCACGACTTCCGCCGCCCCCGCCGCTTCGC
CGGCTTCCCAGGCCACTCCG

Downstream 100 bases:

>100_bases
GCCGCGCCGCCGCGGTATCGCCCGTGACGCGGGCGGGAAGGCCGGGCCGGGGCGGATGCCTCGTCGCCCGGCCTTCGTGC
GTCAGGCACCCGCGATGGGC

Product: HesB/YadR/YfhF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAVRLTDAAIQQVKSVITAQGFEGYFFSIRVVPAGCSGLGYDLNLVKESKAGDTVWEQDGVKIASDPMSSQYLGGTEIDY
VSAITGSGFKFNNPNAKSSCGCGTSFTT

Sequences:

>Translated_108_residues
MAVRLTDAAIQQVKSVITAQGFEGYFFSIRVVPAGCSGLGYDLNLVKESKAGDTVWEQDGVKIASDPMSSQYLGGTEIDY
VSAITGSGFKFNNPNAKSSCGCGTSFTT
>Mature_107_residues
AVRLTDAAIQQVKSVITAQGFEGYFFSIRVVPAGCSGLGYDLNLVKESKAGDTVWEQDGVKIASDPMSSQYLGGTEIDYV
SAITGSGFKFNNPNAKSSCGCGTSFTT

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=38.0952380952381, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI160420328, Length=106, Percent_Identity=33.0188679245283, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=41.5094339622642, Blast_Score=90, Evalue=3e-20,
Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=40.1869158878505, Blast_Score=88, Evalue=1e-19,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=35.2380952380952, Blast_Score=72, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=39.622641509434, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=39.622641509434, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71998452, Length=107, Percent_Identity=31.7757009345794, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=37.5, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=37.7358490566038, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11361; Mature: 11230

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRLTDAAIQQVKSVITAQGFEGYFFSIRVVPAGCSGLGYDLNLVKESKAGDTVWEQDG
CEEEECHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCEECCCC
VKIASDPMSSQYLGGTEIDYVSAITGSGFKFNNPNAKSSCGCGTSFTT
CEEECCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVRLTDAAIQQVKSVITAQGFEGYFFSIRVVPAGCSGLGYDLNLVKESKAGDTVWEQDG
EEEECHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCEECCCC
VKIASDPMSSQYLGGTEIDYVSAITGSGFKFNNPNAKSSCGCGTSFTT
CEEECCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]