| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yusP [H]
Identifier: 108763799
GI number: 108763799
Start: 1850658
End: 1852001
Strand: Direct
Name: yusP [H]
Synonym: MXAN_1576
Alternate gene names: 108763799
Gene position: 1850658-1852001 (Clockwise)
Preceding gene: 108760532
Following gene: 108760504
Centisome position: 20.25
GC content: 72.69
Gene sequence:
>1344_bases ATGGTCAGCGCGCGTCCAGGCGTGGCGCGGCGGACAGCGACAGGCGCGGTGTTGCTGGCCCTGGTGGTCAGCGCGTTCGA AGGCACCGTCGTGACGAGTGCCATGCCCACCATCACCCGGGAGCTGGGAGGTCAGCACCTCTACTCGTGGGTGTTCTCCG CCTTCCTCTTTGCCTCCACCGTCGGCGTGCTCGTCTCCGGGAAGCTGGCGGACCGGCTGGGACGCAAGCCCGTCTTCTTC TCGGGCATGGGGTTGTTCCTGGTGGGCTCCGCGCTGTGTGGCCTGGCGGACTCGGTGCCGGGGCTCATTGCCTTCCGGGT CATCCAGGGCTTGGGCGCGGGCGCGTTGCAGCCCACCACGCTCACCATCTCCGCCGACCTCTACACGCTGCGTGAGCGCG TCGCCGTGCAGGGGCTGTTCACAGGGGCCTGGGGCGCGGGCAACGTCGTGGGGCCGCTCATTGGCGGCTGGCTGGTGATG CACGCCTCGTGGCGCTGGGTGTTCCTGGTCAACGTGCCGGTGGGCCTGTTCGCCGCGGCGCTGCTGTACCTCTCCTACCG CGACCCGCCTCGCCGTCCGGAGGTCCGCATGGACCGGTGGGGGCCCGTGCTCGCGGGCTCCTCGGCGGCGCTGCTCCTCT TCTCGTTGGAGCCGGGGGCCGCGAGCCTGCGGTGGGCCTGCGCGCTGGCCGCCGTGGGCGCGGGCTGGCTGCTGGTGTGG CAGCAACGCACGACGGTGTCTCCGTTGCTTCCGGCGGAGTTGCTGAGAGATCGCGCGGTGCTCAGCGGCATCGTGGGCGG CATCGCGGGCGGCTCGCTGCTGTACAGCATGGCCGCGTGGGTGCCGTTGTGGATGACGGAGCAAGGCGGTCACACGCCAC TGGCGGCGGGACTGGCGCTGCTGCCGATGCTGCTGGGCTGGTCCGTGGGCTCCACCTTCGGCGTGAAGCTGCTGGTGCGC GGAGGCATGCGACTGAGCGCCGGCGTGGGCTTCGCGGTGGCGGCGCTGGGGGCCGGGTGGCTGTCATTGGCCGCCGCACG GGGCTGGGGTGTGCCCGCGGCGCTGATGGGGCTGGCGGTGCTCGGCCTGGGGCTGGGGCCCGCCGCCAGCACGTCGCTGA TTGGACCGCAGTCCCGCGCGCCCTGGCACCACCGGGGCATCGTCACCAGCGCGCTCTACGCCACGCGGCTTCTGGGCGGC TCACTGGCGGTGGCGTTGCTCGCGCTGGCCAGCGGGCACTTCGCCCTGCAGTTCGGCATCGCCGCTGGACTCACGGCCGT CGCGGCGCTCGGGTTGGCGCTGTTGGCTCCGGGCAGGACGGAGCCAGCGGCATCGGGGGCGTGA
Upstream 100 bases:
>100_bases GCGGATTCCGCAAAAAGCCTATGCGGAAGATGCGGTTTCCGCATGGGGGCCTGGGGCGTACAGAGAGGTAATGGACGGAA GCGGCGTCACAGCGGAGCCC
Downstream 100 bases:
>100_bases CAGCGGGCACGTTTCTCTCAGCCCGTGCCGCCTCCCGGGCCCGGTGCTCGGGCGCGCGCGAGGGGCGGCGCCGGTGCTCG TGCCGCCACCGACGCATCAC
Product: major facilitator family transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MVSARPGVARRTATGAVLLALVVSAFEGTVVTSAMPTITRELGGQHLYSWVFSAFLFASTVGVLVSGKLADRLGRKPVFF SGMGLFLVGSALCGLADSVPGLIAFRVIQGLGAGALQPTTLTISADLYTLRERVAVQGLFTGAWGAGNVVGPLIGGWLVM HASWRWVFLVNVPVGLFAAALLYLSYRDPPRRPEVRMDRWGPVLAGSSAALLLFSLEPGAASLRWACALAAVGAGWLLVW QQRTTVSPLLPAELLRDRAVLSGIVGGIAGGSLLYSMAAWVPLWMTEQGGHTPLAAGLALLPMLLGWSVGSTFGVKLLVR GGMRLSAGVGFAVAALGAGWLSLAAARGWGVPAALMGLAVLGLGLGPAASTSLIGPQSRAPWHHRGIVTSALYATRLLGG SLAVALLALASGHFALQFGIAAGLTAVAALGLALLAPGRTEPAASGA
Sequences:
>Translated_447_residues MVSARPGVARRTATGAVLLALVVSAFEGTVVTSAMPTITRELGGQHLYSWVFSAFLFASTVGVLVSGKLADRLGRKPVFF SGMGLFLVGSALCGLADSVPGLIAFRVIQGLGAGALQPTTLTISADLYTLRERVAVQGLFTGAWGAGNVVGPLIGGWLVM HASWRWVFLVNVPVGLFAAALLYLSYRDPPRRPEVRMDRWGPVLAGSSAALLLFSLEPGAASLRWACALAAVGAGWLLVW QQRTTVSPLLPAELLRDRAVLSGIVGGIAGGSLLYSMAAWVPLWMTEQGGHTPLAAGLALLPMLLGWSVGSTFGVKLLVR GGMRLSAGVGFAVAALGAGWLSLAAARGWGVPAALMGLAVLGLGLGPAASTSLIGPQSRAPWHHRGIVTSALYATRLLGG SLAVALLALASGHFALQFGIAAGLTAVAALGLALLAPGRTEPAASGA >Mature_447_residues MVSARPGVARRTATGAVLLALVVSAFEGTVVTSAMPTITRELGGQHLYSWVFSAFLFASTVGVLVSGKLADRLGRKPVFF SGMGLFLVGSALCGLADSVPGLIAFRVIQGLGAGALQPTTLTISADLYTLRERVAVQGLFTGAWGAGNVVGPLIGGWLVM HASWRWVFLVNVPVGLFAAALLYLSYRDPPRRPEVRMDRWGPVLAGSSAALLLFSLEPGAASLRWACALAAVGAGWLLVW QQRTTVSPLLPAELLRDRAVLSGIVGGIAGGSLLYSMAAWVPLWMTEQGGHTPLAAGLALLPMLLGWSVGSTFGVKLLVR GGMRLSAGVGFAVAALGAGWLSLAAARGWGVPAALMGLAVLGLGLGPAASTSLIGPQSRAPWHHRGIVTSALYATRLLGG SLAVALLALASGHFALQFGIAAGLTAVAALGLALLAPGRTEPAASGA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=319, Percent_Identity=31.3479623824451, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788710, Length=389, Percent_Identity=28.0205655526992, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081983, Length=422, Percent_Identity=27.9620853080569, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1789042, Length=323, Percent_Identity=28.1733746130031, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788392, Length=316, Percent_Identity=27.8481012658228, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1790146, Length=135, Percent_Identity=32.5925925925926, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87082320, Length=338, Percent_Identity=24.8520710059172, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322958, Length=185, Percent_Identity=25.4054054054054, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323735, Length=262, Percent_Identity=27.0992366412214, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321663, Length=146, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6325455, Length=153, Percent_Identity=28.1045751633987, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319770, Length=391, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45718; Mature: 45718
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSARPGVARRTATGAVLLALVVSAFEGTVVTSAMPTITRELGGQHLYSWVFSAFLFAST CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VGVLVSGKLADRLGRKPVFFSGMGLFLVGSALCGLADSVPGLIAFRVIQGLGAGALQPTT HHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEE LTISADLYTLRERVAVQGLFTGAWGAGNVVGPLIGGWLVMHASWRWVFLVNVPVGLFAAA EEEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH LLYLSYRDPPRRPEVRMDRWGPVLAGSSAALLLFSLEPGAASLRWACALAAVGAGWLLVW HHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEE QQRTTVSPLLPAELLRDRAVLSGIVGGIAGGSLLYSMAAWVPLWMTEQGGHTPLAAGLAL ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH LPMLLGWSVGSTFGVKLLVRGGMRLSAGVGFAVAALGAGWLSLAAARGWGVPAALMGLAV HHHHHHCCCCCHHHHHHHEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LGLGLGPAASTSLIGPQSRAPWHHRGIVTSALYATRLLGGSLAVALLALASGHFALQFGI HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH AAGLTAVAALGLALLAPGRTEPAASGA HHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVSARPGVARRTATGAVLLALVVSAFEGTVVTSAMPTITRELGGQHLYSWVFSAFLFAST CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH VGVLVSGKLADRLGRKPVFFSGMGLFLVGSALCGLADSVPGLIAFRVIQGLGAGALQPTT HHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEE LTISADLYTLRERVAVQGLFTGAWGAGNVVGPLIGGWLVMHASWRWVFLVNVPVGLFAAA EEEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH LLYLSYRDPPRRPEVRMDRWGPVLAGSSAALLLFSLEPGAASLRWACALAAVGAGWLLVW HHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEE QQRTTVSPLLPAELLRDRAVLSGIVGGIAGGSLLYSMAAWVPLWMTEQGGHTPLAAGLAL ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH LPMLLGWSVGSTFGVKLLVRGGMRLSAGVGFAVAALGAGWLSLAAARGWGVPAALMGLAV HHHHHHCCCCCHHHHHHHEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LGLGLGPAASTSLIGPQSRAPWHHRGIVTSALYATRLLGGSLAVALLALASGHFALQFGI HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH AAGLTAVAALGLALLAPGRTEPAASGA HHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]