| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is merA [H]
Identifier: 108763795
GI number: 108763795
Start: 331739
End: 333130
Strand: Reverse
Name: merA [H]
Synonym: MXAN_0278
Alternate gene names: 108763795
Gene position: 333130-331739 (Counterclockwise)
Preceding gene: 108760444
Following gene: 108758210
Centisome position: 3.64
GC content: 70.76
Gene sequence:
>1392_bases ATGGCGGAAGCGTTCGACGTGGTGGTGATAGGGGCAGGCCCCGCGGGTGAGGTCGCCGGTGCGCGCGCCGCGGAGGCCGG GCTGTCAGTGGCGTTGGTGGAGCATGAGCTGCTCGGCGGCGAGTGCTCATACTGGGCCTGCATCCCCAGCAAGGCCTTGC TGCGCCCGAGCGAAGCGCGGTGGCTGGCGGAGCATGCCGCCGGCGTGCGCGAGAAGCTCCAGGAGGGCATCGACGCGCGT GCGGTGCTGGCCCACCGGGATTCGATGGTCAACAACTACCAGGACGACTCCCAGGTGAAGTGGGCCGAGAATGCGAAGCT GAAGGTGGTGCGGGGCACCGGCAAGCTCACTGGCCCTCGCAAGGTGCGTGTGGAGGACAAGGACGGCGCCGTGCGGGAGC TGGAGGCCCGAAAAGCCGTGGTGCTGGCCACCGGCAGCCATCCGCGCATCCCGGACATCCCGGGGCTGAAGGACGCCCAG CCCTGGGACAACCGCCAGGGCACTGCGGCGAGGCAGGTGCCCAAGCGGCTGGTGGTGCTGGGCGGCGGCGCGGTCGGGGT GGAGCTGGCCCAGGCGTGGCGCTCGCTGGGCTCCGAGGTGACGCTGGTGCAGCGCGGAAAGAGATTGCTGTCCCGCGCGG AGCCCTTCGCCGGAGAGCAGGTGGCCCAGGCGCTGCGAGATGCCGGCGCGCGCGTGCTGCTTGGAATGAACGCGACGCGC GTCCAGCGGCCCGGCGGCAAGGGCGAGGTGACGGTGACGCTGTCCAATGGCGAGCAGGTCGTCGCGGACGAAATCCTGGT GGCCATGGGCCGCGTGCCCCGCACGGAAGGAATCGGGCTGGAGACGGTGGGGCTCGTGGGCGGCAAGCCCGTGGAGGTGG ATGACCAGCTCCGCGCGAAGGGCGTGGACGGCGGCTGGCTCTACGCGTGCGGCGACACCAATGGCCGCAACCTCCTCACC CATATGGGCAAGTACCAGGCCCGCATGGTGGGCGACGTCATCGCGGGCAAGCAGGCAAGGGCCTGGGCGGACGCGAAGGC CACCCCGCAAGTCGTCTTCACCCACCCACAGGTGGCCAGCGTGGGCCTCACCGAGGCCAAGGCACGCGAGGCCGGGCTGC CGGTACGCACGGTGGAGCAGCAACTCCAGGACGTGTCCGGCACCTCGCTGGTGGGCAAGGGCCTCACTGGCACCGTGAAG TGGGTGGTGGACGAGAAGCGCCGGGTGCTCGTGGGCGCCACGTTCACCGGGCCGGAGGTGGGAGAGATGCTCCATGCGGC CACCATCGCCGTGGCGGGGGAGGTGCCGCTCGACACGTTGTGGCACGCGGTGCCGTCGTTCCCCACCATGAGCGAGGTGT GGTTGAAGCTGCTGGAGGCGTACGGCCTCTAG
Upstream 100 bases:
>100_bases CGGGTGACCACCCTCACTTTCCAGCAGCGGACGTGCGTCTCAACGCGACCGTGGGCATGGCCCGCCGCCGCGCTACGCAG CGGGCACGAGGTGAAGGCAC
Downstream 100 bases:
>100_bases CGCGCCGCCCCCTCCGTTGCGTGCGCGGGGGTGGGCGTGGAATGGTGCCGCTGCCCACCCCACCCCACCCTACCGATGAC CGCCGTCGCCCCGGGGCCCT
Product: mercuric reductase, truncated
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MAEAFDVVVIGAGPAGEVAGARAAEAGLSVALVEHELLGGECSYWACIPSKALLRPSEARWLAEHAAGVREKLQEGIDAR AVLAHRDSMVNNYQDDSQVKWAENAKLKVVRGTGKLTGPRKVRVEDKDGAVRELEARKAVVLATGSHPRIPDIPGLKDAQ PWDNRQGTAARQVPKRLVVLGGGAVGVELAQAWRSLGSEVTLVQRGKRLLSRAEPFAGEQVAQALRDAGARVLLGMNATR VQRPGGKGEVTVTLSNGEQVVADEILVAMGRVPRTEGIGLETVGLVGGKPVEVDDQLRAKGVDGGWLYACGDTNGRNLLT HMGKYQARMVGDVIAGKQARAWADAKATPQVVFTHPQVASVGLTEAKAREAGLPVRTVEQQLQDVSGTSLVGKGLTGTVK WVVDEKRRVLVGATFTGPEVGEMLHAATIAVAGEVPLDTLWHAVPSFPTMSEVWLKLLEAYGL
Sequences:
>Translated_463_residues MAEAFDVVVIGAGPAGEVAGARAAEAGLSVALVEHELLGGECSYWACIPSKALLRPSEARWLAEHAAGVREKLQEGIDAR AVLAHRDSMVNNYQDDSQVKWAENAKLKVVRGTGKLTGPRKVRVEDKDGAVRELEARKAVVLATGSHPRIPDIPGLKDAQ PWDNRQGTAARQVPKRLVVLGGGAVGVELAQAWRSLGSEVTLVQRGKRLLSRAEPFAGEQVAQALRDAGARVLLGMNATR VQRPGGKGEVTVTLSNGEQVVADEILVAMGRVPRTEGIGLETVGLVGGKPVEVDDQLRAKGVDGGWLYACGDTNGRNLLT HMGKYQARMVGDVIAGKQARAWADAKATPQVVFTHPQVASVGLTEAKAREAGLPVRTVEQQLQDVSGTSLVGKGLTGTVK WVVDEKRRVLVGATFTGPEVGEMLHAATIAVAGEVPLDTLWHAVPSFPTMSEVWLKLLEAYGL >Mature_462_residues AEAFDVVVIGAGPAGEVAGARAAEAGLSVALVEHELLGGECSYWACIPSKALLRPSEARWLAEHAAGVREKLQEGIDARA VLAHRDSMVNNYQDDSQVKWAENAKLKVVRGTGKLTGPRKVRVEDKDGAVRELEARKAVVLATGSHPRIPDIPGLKDAQP WDNRQGTAARQVPKRLVVLGGGAVGVELAQAWRSLGSEVTLVQRGKRLLSRAEPFAGEQVAQALRDAGARVLLGMNATRV QRPGGKGEVTVTLSNGEQVVADEILVAMGRVPRTEGIGLETVGLVGGKPVEVDDQLRAKGVDGGWLYACGDTNGRNLLTH MGKYQARMVGDVIAGKQARAWADAKATPQVVFTHPQVASVGLTEAKAREAGLPVRTVEQQLQDVSGTSLVGKGLTGTVKW VVDEKRRVLVGATFTGPEVGEMLHAATIAVAGEVPLDTLWHAVPSFPTMSEVWLKLLEAYGL
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=474, Percent_Identity=28.6919831223629, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI50301238, Length=472, Percent_Identity=26.4830508474576, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI33519430, Length=358, Percent_Identity=25.4189944134078, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI33519428, Length=358, Percent_Identity=25.4189944134078, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI33519426, Length=358, Percent_Identity=25.4189944134078, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI148277065, Length=358, Percent_Identity=25.4189944134078, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI148277071, Length=358, Percent_Identity=25.4189944134078, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI22035672, Length=467, Percent_Identity=25.2676659528908, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1786307, Length=465, Percent_Identity=30.3225806451613, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI87081717, Length=460, Percent_Identity=26.7391304347826, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI87082354, Length=466, Percent_Identity=24.0343347639485, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789915, Length=363, Percent_Identity=27.5482093663912, Blast_Score=119, Evalue=3e-28, Organism=Caenorhabditis elegans, GI32565766, Length=463, Percent_Identity=29.1576673866091, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17557007, Length=502, Percent_Identity=25.8964143426295, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71983429, Length=373, Percent_Identity=27.6139410187668, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71983419, Length=373, Percent_Identity=27.6139410187668, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71982272, Length=396, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321091, Length=477, Percent_Identity=28.0922431865828, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6325240, Length=473, Percent_Identity=25.369978858351, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6325166, Length=380, Percent_Identity=26.5789473684211, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI21358499, Length=463, Percent_Identity=29.1576673866091, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24640549, Length=479, Percent_Identity=25.2609603340292, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI17737741, Length=511, Percent_Identity=24.6575342465753, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640553, Length=479, Percent_Identity=25.2609603340292, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640551, Length=479, Percent_Identity=25.2609603340292, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 49112; Mature: 48981
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAFDVVVIGAGPAGEVAGARAAEAGLSVALVEHELLGGECSYWACIPSKALLRPSEAR CCCEEEEEEECCCCCCCCCCCHHHHCCCEEEEEEHHHCCCCCCEEEECCCHHHCCCHHHH WLAEHAAGVREKLQEGIDARAVLAHRDSMVNNYQDDSQVKWAENAKLKVVRGTGKLTGPR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCE KVRVEDKDGAVRELEARKAVVLATGSHPRIPDIPGLKDAQPWDNRQGTAARQVPKRLVVL EEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEE GGGAVGVELAQAWRSLGSEVTLVQRGKRLLSRAEPFAGEQVAQALRDAGARVLLGMNATR CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHH VQRPGGKGEVTVTLSNGEQVVADEILVAMGRVPRTEGIGLETVGLVGGKPVEVDDQLRAK EECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHC GVDGGWLYACGDTNGRNLLTHMGKYQARMVGDVIAGKQARAWADAKATPQVVFTHPQVAS CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCHHH VGLTEAKAREAGLPVRTVEQQLQDVSGTSLVGKGLTGTVKWVVDEKRRVLVGATFTGPEV CCCCHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCEEEEEEECCCHHH GEMLHAATIAVAGEVPLDTLWHAVPSFPTMSEVWLKLLEAYGL HHHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AEAFDVVVIGAGPAGEVAGARAAEAGLSVALVEHELLGGECSYWACIPSKALLRPSEAR CCEEEEEEECCCCCCCCCCCHHHHCCCEEEEEEHHHCCCCCCEEEECCCHHHCCCHHHH WLAEHAAGVREKLQEGIDARAVLAHRDSMVNNYQDDSQVKWAENAKLKVVRGTGKLTGPR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCE KVRVEDKDGAVRELEARKAVVLATGSHPRIPDIPGLKDAQPWDNRQGTAARQVPKRLVVL EEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEE GGGAVGVELAQAWRSLGSEVTLVQRGKRLLSRAEPFAGEQVAQALRDAGARVLLGMNATR CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHH VQRPGGKGEVTVTLSNGEQVVADEILVAMGRVPRTEGIGLETVGLVGGKPVEVDDQLRAK EECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHC GVDGGWLYACGDTNGRNLLTHMGKYQARMVGDVIAGKQARAWADAKATPQVVFTHPQVAS CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCHHH VGLTEAKAREAGLPVRTVEQQLQDVSGTSLVGKGLTGTVKWVVDEKRRVLVGATFTGPEV CCCCHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCEEEEEEECCCHHH GEMLHAATIAVAGEVPLDTLWHAVPSFPTMSEVWLKLLEAYGL HHHHHHHHHEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]