| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mmgC [H]
Identifier: 108763787
GI number: 108763787
Start: 909119
End: 910927
Strand: Reverse
Name: mmgC [H]
Synonym: MXAN_0797
Alternate gene names: 108763787
Gene position: 910927-909119 (Counterclockwise)
Preceding gene: 108759264
Following gene: 108761174
Centisome position: 9.97
GC content: 70.65
Gene sequence:
>1809_bases ATGACGACCGCGCCCCGCCCCAATCCGCTGCTGTCGGACCGCGACGTGGACTTCCAGCTCTACGAGGTGCTGGATGCCAC GTCGCTGTGTGCCCTGCCCGCGTTCGCGGAGCACTCCCGCGACACCTTCACCCTGCTGCTGGACAGCACGCGTCGCTTCG CGCGCGAGGTGCTCTACCCCACCTACCGCGACATGGACGCCCAGCCCCCGTCCTTCCGCGACGGGCGCGTCCACGTCCAC CCGCTGATGCGCGAGCTGTACCCGCGTCTGGTGGAGCTGGGCCTGCTCACCGCCACGCGCCCGCCCGACGTCGGCGGACA GCAACTGCCGCTCACCGTGCACGCGGTATCCACCGCCTACCTCATGGCGGCCAACCTGAGCGTCTACGCCTGGCTGGGCC TGACGCTGGGCGCGGCGCACCTGCTGGAGGTGTTCGGCACGCCGGAGGTGAAGGCGACCTTCATGGAACCGATGTACCGG GGCGAATGGACGGGCACCATGGCCCTCACCGAGCCGCAGGCGGGCAGCAGCCTCGCGGACGTGCGGACCCGGGCGACGCC CGCGCCGGACGGCACCTGGCGCATCCAGGGTTCGAAAATCTTCATCAGCGGCGCGGACCAGGACTTCAACGAGAACGTGG TGCACCTGACGCTGGCGCGCATCGAAGGCGCGGAGGGCGGCACGCGGGGCATCTCCCTCTTCGCGGTGCCCTCTCGGCGG CCGGAGGGCGGCACGCTGGTGGACAACGACGTTCGCGTGGCGGGCGTCATCCACAAGATTGGCTGGAAGGGCATCCCCAG CCTGGCTCTCAACTATGGCGAGTCGGGTGACTGCCACGGTTGGCTGGTGGGGCCCCCCGGACGGGGCCTGGCGTGCATGT TCCAGATGATGAACGAGGCGCGCATCATGGTGGGCATGAACGGGGTGGCCACCGCGACGGTGGCGTACCACGAGGCCGTG GCCTACGCGCGTGAGCGCCCCCAGGGCCGGCCCACTGGCGTGCGCGACGCCACGCGGCCGCAGACGCCCATCATCGAACA CGCGGATGTGCGGCGGATGTTGCTGCGGCAAAAGGCCATCGTCGAAGGGGGCCTGTCGTTGCTGCTCGCCGCGTCGTACC AGGCGGACCTCGCGGGCCATGGCCAGGACGAAGCCACGCGCCAGCGCGCGGGCCTGCTGGTGGACCTGCTGACGCCCGTG GCGAAGTCGTTCCCCGCCGAGCGCGGCTTCGAGGCCAATGCGCTCGCGGTGCAGGTGCATGGGGGCTACGGCTACTCCAG CGAGTACCTGCCCGAGGCCTGGTTGAGAGACCAGAAGCTCAACAGCATCCACGAGGGAACCACCGGCATCCAGGGCCTGG ATTTACTGGGGCGCAAGGTGGTGGCTGGAGGCGGCGCGGCGCTCCAGTCCTTCGCGGAGGAAGTGGGCACCACGGTGGCG CGAGCACGCGCGGCGGGCGTGACGCCAGAGTGGGGCGAAGCGCTCGAACAGGCCCTTGCGGAGACCACCACCGTGGTGAC GGAGCTGGGCGCGCGTGGCATGTCCGGCGAGGTCGAGTTGATGCTGCGGCACAGCGCGGACTTCCTGGAGCTGTTCAGCG TGCTCGCGGTGGCCTGGCGCTGGCTGGCCCAGGCCGCGGCGGCGAAGGAGGCGCTGGAGCGCGGCGACCCGGACGCCGAC TTCTACGAGGGCAAGCTGGCCGCGGCGCAGTACTGGTTCGCGGTGGAGCTGCCCCGAGTGCCACTGCTCGCCCGGCTGTG CCGGACAGGAGAGGATTCCTACGCGCGCATGCGCCCGGAATGGTTCTGA
Upstream 100 bases:
>100_bases GCCCGACGCGGTGCGCGACATCCGGGACGACGCTCCGGACGACGACCTCGATTTCGAGTCTGCCTTCGCGTCCTACTAAC GCGCCTGTTAACACCGGGGC
Downstream 100 bases:
>100_bases GACGACGCCCCCGACGATTCTCCTGCATGAATCGTTGGAGCTCGTAAGATGTAAAGCGTGACTGTTTCTTTCCACCTGTG CCAGCCCGGTGGAGGCGCGT
Product: acyl-CoA dehydrogenase family protein
Products: 2-butenoyl-CoA; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MTTAPRPNPLLSDRDVDFQLYEVLDATSLCALPAFAEHSRDTFTLLLDSTRRFAREVLYPTYRDMDAQPPSFRDGRVHVH PLMRELYPRLVELGLLTATRPPDVGGQQLPLTVHAVSTAYLMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYR GEWTGTMALTEPQAGSSLADVRTRATPAPDGTWRIQGSKIFISGADQDFNENVVHLTLARIEGAEGGTRGISLFAVPSRR PEGGTLVDNDVRVAGVIHKIGWKGIPSLALNYGESGDCHGWLVGPPGRGLACMFQMMNEARIMVGMNGVATATVAYHEAV AYARERPQGRPTGVRDATRPQTPIIEHADVRRMLLRQKAIVEGGLSLLLAASYQADLAGHGQDEATRQRAGLLVDLLTPV AKSFPAERGFEANALAVQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAGGGAALQSFAEEVGTTVA RARAAGVTPEWGEALEQALAETTTVVTELGARGMSGEVELMLRHSADFLELFSVLAVAWRWLAQAAAAKEALERGDPDAD FYEGKLAAAQYWFAVELPRVPLLARLCRTGEDSYARMRPEWF
Sequences:
>Translated_602_residues MTTAPRPNPLLSDRDVDFQLYEVLDATSLCALPAFAEHSRDTFTLLLDSTRRFAREVLYPTYRDMDAQPPSFRDGRVHVH PLMRELYPRLVELGLLTATRPPDVGGQQLPLTVHAVSTAYLMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYR GEWTGTMALTEPQAGSSLADVRTRATPAPDGTWRIQGSKIFISGADQDFNENVVHLTLARIEGAEGGTRGISLFAVPSRR PEGGTLVDNDVRVAGVIHKIGWKGIPSLALNYGESGDCHGWLVGPPGRGLACMFQMMNEARIMVGMNGVATATVAYHEAV AYARERPQGRPTGVRDATRPQTPIIEHADVRRMLLRQKAIVEGGLSLLLAASYQADLAGHGQDEATRQRAGLLVDLLTPV AKSFPAERGFEANALAVQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAGGGAALQSFAEEVGTTVA RARAAGVTPEWGEALEQALAETTTVVTELGARGMSGEVELMLRHSADFLELFSVLAVAWRWLAQAAAAKEALERGDPDAD FYEGKLAAAQYWFAVELPRVPLLARLCRTGEDSYARMRPEWF >Mature_601_residues TTAPRPNPLLSDRDVDFQLYEVLDATSLCALPAFAEHSRDTFTLLLDSTRRFAREVLYPTYRDMDAQPPSFRDGRVHVHP LMRELYPRLVELGLLTATRPPDVGGQQLPLTVHAVSTAYLMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYRG EWTGTMALTEPQAGSSLADVRTRATPAPDGTWRIQGSKIFISGADQDFNENVVHLTLARIEGAEGGTRGISLFAVPSRRP EGGTLVDNDVRVAGVIHKIGWKGIPSLALNYGESGDCHGWLVGPPGRGLACMFQMMNEARIMVGMNGVATATVAYHEAVA YARERPQGRPTGVRDATRPQTPIIEHADVRRMLLRQKAIVEGGLSLLLAASYQADLAGHGQDEATRQRAGLLVDLLTPVA KSFPAERGFEANALAVQVHGGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAGGGAALQSFAEEVGTTVAR ARAAGVTPEWGEALEQALAETTTVVTELGARGMSGEVELMLRHSADFLELFSVLAVAWRWLAQAAAAKEALERGDPDADF YEGKLAAAQYWFAVELPRVPLLARLCRTGEDSYARMRPEWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl-CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4557233, Length=434, Percent_Identity=26.036866359447, Blast_Score=93, Evalue=8e-19, Organism=Homo sapiens, GI7656849, Length=372, Percent_Identity=25.2688172043011, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI4501857, Length=427, Percent_Identity=23.8875878220141, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI87082384, Length=291, Percent_Identity=29.8969072164948, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87081958, Length=382, Percent_Identity=24.6073298429319, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI86563381, Length=373, Percent_Identity=27.6139410187668, Blast_Score=93, Evalue=5e-19, Organism=Caenorhabditis elegans, GI86563383, Length=373, Percent_Identity=27.6139410187668, Blast_Score=93, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17533517, Length=443, Percent_Identity=24.6049661399549, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356377, Length=454, Percent_Identity=24.4493392070485, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24666513, Length=428, Percent_Identity=24.5327102803738, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646207, Length=428, Percent_Identity=24.5327102803738, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006089 - InterPro: IPR006092 - InterPro: IPR006090 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: 1.3.99.2
Molecular weight: Translated: 65444; Mature: 65313
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPRPNPLLSDRDVDFQLYEVLDATSLCALPAFAEHSRDTFTLLLDSTRRFAREVLYP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCC TYRDMDAQPPSFRDGRVHVHPLMRELYPRLVELGLLTATRPPDVGGQQLPLTVHAVSTAY CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHH LMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYRGEWTGTMALTEPQAGSSLAD HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH VRTRATPAPDGTWRIQGSKIFISGADQDFNENVVHLTLARIEGAEGGTRGISLFAVPSRR HHHCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC PEGGTLVDNDVRVAGVIHKIGWKGIPSLALNYGESGDCHGWLVGPPGRGLACMFQMMNEA CCCCCEECCCCHHHHHHHHHCCCCCCHHHEECCCCCCCCEEEECCCCCHHHHHHHHHCCC RIMVGMNGVATATVAYHEAVAYARERPQGRPTGVRDATRPQTPIIEHADVRRMLLRQKAI EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VEGGLSLLLAASYQADLAGHGQDEATRQRAGLLVDLLTPVAKSFPAERGFEANALAVQVH HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE GGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAGGGAALQSFAEEVGTTVA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHH RARAAGVTPEWGEALEQALAETTTVVTELGARGMSGEVELMLRHSADFLELFSVLAVAWR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH WLAQAAAAKEALERGDPDADFYEGKLAAAQYWFAVELPRVPLLARLCRTGEDSYARMRPE HHHHHHHHHHHHHCCCCCCCHHCCCHHHHEEEEEEECCCHHHHHHHHHCCCCHHHCCCCC WF CC >Mature Secondary Structure TTAPRPNPLLSDRDVDFQLYEVLDATSLCALPAFAEHSRDTFTLLLDSTRRFAREVLYP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCC TYRDMDAQPPSFRDGRVHVHPLMRELYPRLVELGLLTATRPPDVGGQQLPLTVHAVSTAY CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHH LMAANLSVYAWLGLTLGAAHLLEVFGTPEVKATFMEPMYRGEWTGTMALTEPQAGSSLAD HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH VRTRATPAPDGTWRIQGSKIFISGADQDFNENVVHLTLARIEGAEGGTRGISLFAVPSRR HHHCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC PEGGTLVDNDVRVAGVIHKIGWKGIPSLALNYGESGDCHGWLVGPPGRGLACMFQMMNEA CCCCCEECCCCHHHHHHHHHCCCCCCHHHEECCCCCCCCEEEECCCCCHHHHHHHHHCCC RIMVGMNGVATATVAYHEAVAYARERPQGRPTGVRDATRPQTPIIEHADVRRMLLRQKAI EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VEGGLSLLLAASYQADLAGHGQDEATRQRAGLLVDLLTPVAKSFPAERGFEANALAVQVH HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE GGYGYSSEYLPEAWLRDQKLNSIHEGTTGIQGLDLLGRKVVAGGGAALQSFAEEVGTTVA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHH RARAAGVTPEWGEALEQALAETTTVVTELGARGMSGEVELMLRHSADFLELFSVLAVAWR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH WLAQAAAAKEALERGDPDADFYEGKLAAAQYWFAVELPRVPLLARLCRTGEDSYARMRPE HHHHHHHHHHHHHCCCCCCCHHCCCHHHHEEEEEEECCCHHHHHHHHHCCCCHHHCCCCC WF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: butanoyl-CoA; acceptor
Specific reaction: butanoyl-CoA + acceptor = 2-butenoyl-CoA + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759838; 8969508; 9384377 [H]