| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is frzCD [H]
Identifier: 108763763
GI number: 108763763
Start: 3185457
End: 3187028
Strand: Direct
Name: frzCD [H]
Synonym: MXAN_2735
Alternate gene names: 108763763
Gene position: 3185457-3187028 (Clockwise)
Preceding gene: 108762826
Following gene: 108761309
Centisome position: 34.85
GC content: 70.67
Gene sequence:
>1572_bases ATGGCAAGCATGTGGGGCCGGCTCGGCTTGCGGACGCAGGTGGCCATCGCGGTGCTCGTGCCGTGCCTGGCGGTGGTGAG CTTCTGCGTCGTGTACTTCCCCATGCACCAGCGGGAAGTCACGCTGGAGTTGCTCCAGAAGCGGGTGCGGGTGGTGGCGC GGCTGATATCGCAGCACCCCGCGCTCCTGTCCGCGGACAGCACGCCGGAATCCACGGCCCGGGTGCGGGACGTGTTGTCG ATGCTGGAGGCCCCGGAGGCGCTGAACGAGCGCGGTGGCTTCACCCTGCGCTACCAGGGGCTGGTGTCGGCGGAAGGCAC CGTGCTCCATGGGCGCGGCTCCATTCCCACGGCCATCCGCTCGCTCGGCGTGGAGGGGCTGGAGGGCTGCGCCACGTCCA CCCAACACGACGAGGTGTCGGTCCGCTGCGCCAGTGGTGAGCGCATCTACGTGGCGGGCTTCGGCGTCCAGGAGGCGCTC AGCTCGGTGGATGACATGCGGGGCGCGGTGCTGGCCGGCCTGGCGGGCGCGCTGGTGCTGGGGCTGGCCCTGTCGTTGTT CATCAGCCGCGCCATCGCCGAACCGGTGGCCCGGGTGACGGAGGTGGTGCGGGACGTGGCCCGGGGTGACATGTCGCGCG GGGAACTGGACGTGCCGGCCACGGGCGAGGTGCGCCTCATGGCGCAGTCGTTCAACAAGATGCTGGGCACGCTGCGCACC TCGGTGATGGAGATGGTTTCGCGCACGGAGCAGTTGTCCGGCGCATCGCGGGGCCTGTTGGGGGCGTCCGCGGACCAGGA ACACGTCATCAGCCAGCAGGCGGCGTACGCGCAGCAGATTGCCGCCACGTTCGAGGAGCTGAGCCGCACGGCCGAGCAGA TCTCCAGCTCCACGGAGGTGGTGGAGTCGAGCGCGCGGCGCACCCACGAGGCCGTGGCGGAGGCCATGGCGGTGGTTGCG CAGGTGGTGGCGGGCATCAACGACATCCGCACCGAGTCCAAGGGCGTCGCGGACGCGATTGTCGGCCTCAACCAGGACCT TCAGCAGGTGTCGAAGATTGCCCAGGTCATCAACCAGGTGGCGGAGCGCTCCGACTTGCTGGCGCTGAACGCGGCGCTGG AGGGCACCAAGGCGGGCGAGGTGGGGCGGGGCTTCTCGCTGGTGGCCGCGGAGATGCGCAAGCTGGCGGAGAACGTGTCC GCATCCGCGCGTGACATCGCCCGCATCGTGGAGAAGGTGCAGGACTCCGGCGAGGAAGCGGCAGCCAAGGCCCGCGTGGG CATGGCCACCAGCGACCGGGGCGTGGAGGTGGCCGAGCAGGCCTCCTCCGTGTTCCAGCGAATCGTCGAGCTGGCGCGCG GCACCAGCGAGGCGGCCCGGCAGATCACCATCGCCACCCGTCAGCAGCGCCAGTCCAGTGAGCAGGCCGTGCAGGGCGCC CGCAACGTCGCGGAGCTGGTGAAGCAGGGCGTGGACGCGACGGGACGCACCACGCGCATCGCCCAGGACCTGCAGGCGGT GGCCGAGGGGCTCACCGCCGTCACCAGCCGCTTCAAGACGACGCGGAACTGA
Upstream 100 bases:
>100_bases CGGCTCCAGTCTGGCCGGCCGGTTTGACGCTCCGCGAAGGGACGCCTACCGTCCGAGAACCGTCGGCATCCATCCGGCGT GAAACTTTCTCACCGGGGAG
Downstream 100 bases:
>100_bases GGCTCACTCCCGCTGCCAGCGCAGCTGGAACTCGACCTCGTCCACGCCGTCCCCGCGCTCGTGCTCGATGTTGAAGAGCG CGTCGGCGGGGATGCGCAGG
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MASMWGRLGLRTQVAIAVLVPCLAVVSFCVVYFPMHQREVTLELLQKRVRVVARLISQHPALLSADSTPESTARVRDVLS MLEAPEALNERGGFTLRYQGLVSAEGTVLHGRGSIPTAIRSLGVEGLEGCATSTQHDEVSVRCASGERIYVAGFGVQEAL SSVDDMRGAVLAGLAGALVLGLALSLFISRAIAEPVARVTEVVRDVARGDMSRGELDVPATGEVRLMAQSFNKMLGTLRT SVMEMVSRTEQLSGASRGLLGASADQEHVISQQAAYAQQIAATFEELSRTAEQISSSTEVVESSARRTHEAVAEAMAVVA QVVAGINDIRTESKGVADAIVGLNQDLQQVSKIAQVINQVAERSDLLALNAALEGTKAGEVGRGFSLVAAEMRKLAENVS ASARDIARIVEKVQDSGEEAAAKARVGMATSDRGVEVAEQASSVFQRIVELARGTSEAARQITIATRQQRQSSEQAVQGA RNVAELVKQGVDATGRTTRIAQDLQAVAEGLTAVTSRFKTTRN
Sequences:
>Translated_523_residues MASMWGRLGLRTQVAIAVLVPCLAVVSFCVVYFPMHQREVTLELLQKRVRVVARLISQHPALLSADSTPESTARVRDVLS MLEAPEALNERGGFTLRYQGLVSAEGTVLHGRGSIPTAIRSLGVEGLEGCATSTQHDEVSVRCASGERIYVAGFGVQEAL SSVDDMRGAVLAGLAGALVLGLALSLFISRAIAEPVARVTEVVRDVARGDMSRGELDVPATGEVRLMAQSFNKMLGTLRT SVMEMVSRTEQLSGASRGLLGASADQEHVISQQAAYAQQIAATFEELSRTAEQISSSTEVVESSARRTHEAVAEAMAVVA QVVAGINDIRTESKGVADAIVGLNQDLQQVSKIAQVINQVAERSDLLALNAALEGTKAGEVGRGFSLVAAEMRKLAENVS ASARDIARIVEKVQDSGEEAAAKARVGMATSDRGVEVAEQASSVFQRIVELARGTSEAARQITIATRQQRQSSEQAVQGA RNVAELVKQGVDATGRTTRIAQDLQAVAEGLTAVTSRFKTTRN >Mature_522_residues ASMWGRLGLRTQVAIAVLVPCLAVVSFCVVYFPMHQREVTLELLQKRVRVVARLISQHPALLSADSTPESTARVRDVLSM LEAPEALNERGGFTLRYQGLVSAEGTVLHGRGSIPTAIRSLGVEGLEGCATSTQHDEVSVRCASGERIYVAGFGVQEALS SVDDMRGAVLAGLAGALVLGLALSLFISRAIAEPVARVTEVVRDVARGDMSRGELDVPATGEVRLMAQSFNKMLGTLRTS VMEMVSRTEQLSGASRGLLGASADQEHVISQQAAYAQQIAATFEELSRTAEQISSSTEVVESSARRTHEAVAEAMAVVAQ VVAGINDIRTESKGVADAIVGLNQDLQQVSKIAQVINQVAERSDLLALNAALEGTKAGEVGRGFSLVAAEMRKLAENVSA SARDIARIVEKVQDSGEEAAAKARVGMATSDRGVEVAEQASSVFQRIVELARGTSEAARQITIATRQQRQSSEQAVQGAR NVAELVKQGVDATGRTTRIAQDLQAVAEGLTAVTSRFKTTRN
Specific function: Methyl-accepting taxis protein necessary for the proper aggregation of cells to form fruiting bodies. Frz genes define a system of signal transduction analogous to the enterobacterial chemotaxis systems [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI2367378, Length=235, Percent_Identity=31.063829787234, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787690, Length=305, Percent_Identity=27.5409836065574, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788195, Length=224, Percent_Identity=28.125, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789453, Length=311, Percent_Identity=25.4019292604502, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788194, Length=244, Percent_Identity=26.6393442622951, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004089 [H]
Pfam domain/function: PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 55473; Mature: 55342
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMWGRLGLRTQVAIAVLVPCLAVVSFCVVYFPMHQREVTLELLQKRVRVVARLISQHP CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC ALLSADSTPESTARVRDVLSMLEAPEALNERGGFTLRYQGLVSAEGTVLHGRGSIPTAIR CEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCEECCCCEEEECCCCCHHHHH SLGVEGLEGCATSTQHDEVSVRCASGERIYVAGFGVQEALSSVDDMRGAVLAGLAGALVL HCCCHHHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH GLALSLFISRAIAEPVARVTEVVRDVARGDMSRGELDVPATGEVRLMAQSFNKMLGTLRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SVMEMVSRTEQLSGASRGLLGASADQEHVISQQAAYAQQIAATFEELSRTAEQISSSTEV HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VESSARRTHEAVAEAMAVVAQVVAGINDIRTESKGVADAIVGLNQDLQQVSKIAQVINQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHH AERSDLLALNAALEGTKAGEVGRGFSLVAAEMRKLAENVSASARDIARIVEKVQDSGEEA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHH AAKARVGMATSDRGVEVAEQASSVFQRIVELARGTSEAARQITIATRQQRQSSEQAVQGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RNVAELVKQGVDATGRTTRIAQDLQAVAEGLTAVTSRFKTTRN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASMWGRLGLRTQVAIAVLVPCLAVVSFCVVYFPMHQREVTLELLQKRVRVVARLISQHP CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC ALLSADSTPESTARVRDVLSMLEAPEALNERGGFTLRYQGLVSAEGTVLHGRGSIPTAIR CEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCEECCCCEEEECCCCCHHHHH SLGVEGLEGCATSTQHDEVSVRCASGERIYVAGFGVQEALSSVDDMRGAVLAGLAGALVL HCCCHHHHHCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH GLALSLFISRAIAEPVARVTEVVRDVARGDMSRGELDVPATGEVRLMAQSFNKMLGTLRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SVMEMVSRTEQLSGASRGLLGASADQEHVISQQAAYAQQIAATFEELSRTAEQISSSTEV HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VESSARRTHEAVAEAMAVVAQVVAGINDIRTESKGVADAIVGLNQDLQQVSKIAQVINQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHH AERSDLLALNAALEGTKAGEVGRGFSLVAAEMRKLAENVSASARDIARIVEKVQDSGEEA HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHH AAKARVGMATSDRGVEVAEQASSVFQRIVELARGTSEAARQITIATRQQRQSSEQAVQGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RNVAELVKQGVDATGRTTRIAQDLQAVAEGLTAVTSRFKTTRN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2492105; 1624419 [H]