| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763714
Identifier: 108763714
GI number: 108763714
Start: 3824821
End: 3825885
Strand: Direct
Name: 108763714
Synonym: MXAN_3273
Alternate gene names: NA
Gene position: 3824821-3825885 (Clockwise)
Preceding gene: 108757305
Following gene: 108759383
Centisome position: 41.85
GC content: 67.32
Gene sequence:
>1065_bases GTGAGCATCGGGACGCGGGTGGTGCTTGTTTCGCGCACGCGGGTGGGCAGACTTGCGCGCATGGGTGACGTGAAAGAGTT CCACCAGCGGTGGTGCATCGCGGACGGCCATGCGGATTCCCTCATGTGGAACCGCGACCTGTGTGAACGCTCTGAAGAGG GCCATGTGGACTTCCCCCGCCTGCGAGAGGCGGGGGTGAAGCTCCAGTGCTTCACCATCGTCACCCGGGGCTTCCCCTTC ATCGGAGGCTTCCCAGTGTTCGCAGCGTGGCGTGGGTGGCCCCGGGAGGCCCGGGCGAGCGAGTGGACCCGGGCGCTCTG GCAGATTGAGCAGATGGCGTCCTTCTGTGCGCGCTCCGGGGATGCCGCCCGCATCACCACGACCGGCGCCATGCTGGAGG ACAACCTCGCGCAGGGGCGGCTGTCCGCGGTGCTGGGCGTGGAAGGGGGGCACGCCATCGAAGGCCAGGTGGCGCGCCTG TCGGAGCTTCACCAGCGCGGGGTGCGCTTCATGGGCCTCACCCACCTGTCCAACAACGACCTGGGTGGTTCTTCCTTTCC GATGATGGGCAACCGGGGCCTCACACCGCTGGGCCGGGATGTCATGGAGGAGATGGCCCGGCTGGGCATGAGCGTGGATG TGGCGCATGCCTCGGAGTCCACCCTCAAGGACCTCTTCACCCACCCCTCGGTCCGGTTCTTCTGCTCGCACACGGGCGTC CGCGCGGCGGGCGGCGGCTGGCGCAACCTCTCCGACGAATCCCTGCGCTTCATCGCAGACCGGGGCGGGGTGGTGGGCAT CATCTTCGCCCCCGTCTATCTGGGCGGTGACACCGTGGATGACGTGGTCCGGCACATCGAGCATGCCGTGGACGTCATGG GGGAGGGCGGGGTGGGGCTGGGCTCCGACTACGACGGAATGGTGCCGCTTCCCCGTGGCATGAAGGATGTCACCGGGTTG CCTTTGCTCACAGAGGCGCTGTTGCGCCGCCATCCACCGTCCTGGGTGGAACGCGTCATGGGTGGAAACTTCCGTCGTTT CTTCCAGGAGACACTGGGTGGTTGA
Upstream 100 bases:
>100_bases CTGGGAGGACTCCGTGCGTCCGGAGGCCCCGCCGCGCACGACATCCGGGTCGGAGCCTTGAGGGACGGCAGGGGCAAAGG GGGCAGGGCAGGGCCCTTGA
Downstream 100 bases:
>100_bases CCGGCGGCGGGACGCTCGAAATATTGGCTGGTGCCCATGAACCGCTCACTTCTCGCACTGGTCCCGTTGGTTGGCTCTCT GCTCCTCGCTGGTTGTGGCC
Product: M19 family peptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSIGTRVVLVSRTRVGRLARMGDVKEFHQRWCIADGHADSLMWNRDLCERSEEGHVDFPRLREAGVKLQCFTIVTRGFPF IGGFPVFAAWRGWPREARASEWTRALWQIEQMASFCARSGDAARITTTGAMLEDNLAQGRLSAVLGVEGGHAIEGQVARL SELHQRGVRFMGLTHLSNNDLGGSSFPMMGNRGLTPLGRDVMEEMARLGMSVDVAHASESTLKDLFTHPSVRFFCSHTGV RAAGGGWRNLSDESLRFIADRGGVVGIIFAPVYLGGDTVDDVVRHIEHAVDVMGEGGVGLGSDYDGMVPLPRGMKDVTGL PLLTEALLRRHPPSWVERVMGGNFRRFFQETLGG
Sequences:
>Translated_354_residues MSIGTRVVLVSRTRVGRLARMGDVKEFHQRWCIADGHADSLMWNRDLCERSEEGHVDFPRLREAGVKLQCFTIVTRGFPF IGGFPVFAAWRGWPREARASEWTRALWQIEQMASFCARSGDAARITTTGAMLEDNLAQGRLSAVLGVEGGHAIEGQVARL SELHQRGVRFMGLTHLSNNDLGGSSFPMMGNRGLTPLGRDVMEEMARLGMSVDVAHASESTLKDLFTHPSVRFFCSHTGV RAAGGGWRNLSDESLRFIADRGGVVGIIFAPVYLGGDTVDDVVRHIEHAVDVMGEGGVGLGSDYDGMVPLPRGMKDVTGL PLLTEALLRRHPPSWVERVMGGNFRRFFQETLGG >Mature_353_residues SIGTRVVLVSRTRVGRLARMGDVKEFHQRWCIADGHADSLMWNRDLCERSEEGHVDFPRLREAGVKLQCFTIVTRGFPFI GGFPVFAAWRGWPREARASEWTRALWQIEQMASFCARSGDAARITTTGAMLEDNLAQGRLSAVLGVEGGHAIEGQVARLS ELHQRGVRFMGLTHLSNNDLGGSSFPMMGNRGLTPLGRDVMEEMARLGMSVDVAHASESTLKDLFTHPSVRFFCSHTGVR AAGGGWRNLSDESLRFIADRGGVVGIIFAPVYLGGDTVDDVVRHIEHAVDVMGEGGVGLGSDYDGMVPLPRGMKDVTGLP LLTEALLRRHPPSWVERVMGGNFRRFFQETLGG
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=344, Percent_Identity=27.906976744186, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI4758190, Length=344, Percent_Identity=27.906976744186, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI11641269, Length=258, Percent_Identity=31.0077519379845, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI193211608, Length=258, Percent_Identity=31.0077519379845, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI193211610, Length=258, Percent_Identity=31.0077519379845, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI281362638, Length=241, Percent_Identity=34.8547717842324, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI281362636, Length=241, Percent_Identity=34.8547717842324, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI221475880, Length=314, Percent_Identity=30.8917197452229, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI161083233, Length=276, Percent_Identity=31.1594202898551, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 38878; Mature: 38747
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGTRVVLVSRTRVGRLARMGDVKEFHQRWCIADGHADSLMWNRDLCERSEEGHVDFPR CCCCCEEEEEECHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCHHHHHCCCCCCCCCHH LREAGVKLQCFTIVTRGFPFIGGFPVFAAWRGWPREARASEWTRALWQIEQMASFCARSG HHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DAARITTTGAMLEDNLAQGRLSAVLGVEGGHAIEGQVARLSELHQRGVRFMGLTHLSNND CCEEEEECCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC LGGSSFPMMGNRGLTPLGRDVMEEMARLGMSVDVAHASESTLKDLFTHPSVRFFCSHTGV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEECCCCC RAAGGGWRNLSDESLRFIADRGGVVGIIFAPVYLGGDTVDDVVRHIEHAVDVMGEGGVGL CCCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC GSDYDGMVPLPRGMKDVTGLPLLTEALLRRHPPSWVERVMGGNFRRFFQETLGG CCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SIGTRVVLVSRTRVGRLARMGDVKEFHQRWCIADGHADSLMWNRDLCERSEEGHVDFPR CCCCEEEEEECHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCHHHHHCCCCCCCCCHH LREAGVKLQCFTIVTRGFPFIGGFPVFAAWRGWPREARASEWTRALWQIEQMASFCARSG HHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DAARITTTGAMLEDNLAQGRLSAVLGVEGGHAIEGQVARLSELHQRGVRFMGLTHLSNND CCEEEEECCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC LGGSSFPMMGNRGLTPLGRDVMEEMARLGMSVDVAHASESTLKDLFTHPSVRFFCSHTGV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEECCCCC RAAGGGWRNLSDESLRFIADRGGVVGIIFAPVYLGGDTVDDVVRHIEHAVDVMGEGGVGL CCCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC GSDYDGMVPLPRGMKDVTGLPLLTEALLRRHPPSWVERVMGGNFRRFFQETLGG CCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]