| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763694
Identifier: 108763694
GI number: 108763694
Start: 4708768
End: 4709667
Strand: Reverse
Name: 108763694
Synonym: MXAN_3915
Alternate gene names: NA
Gene position: 4709667-4708768 (Counterclockwise)
Preceding gene: 108761087
Following gene: 108763134
Centisome position: 51.53
GC content: 72.0
Gene sequence:
>900_bases GTGAGAGTGAGAACGATTCTCAATTTCGAACTTCCGGAGCCCGCCGCGGATGCAGCATCCTCGGTGTTGGCGCAACCCAC TGGGGCGCTCTTCCGCATGGGGGATGCCGCCGGGGTGGAGGGCTTCTGGAGCCGCTGGAGCGGGGCCGTTGTCGTTGCGG TCGTGCTCCACGCGGTCGTCGTCGCGGCGGGACTGTCCGTGTCCCCGGCGTCGCCGAAGAAGGTGGTGCGGGAGGAGCCG GAGTTGGTGTTGCTGGCGTTCGCCGCGCCTCCGCCCCCGCCGCCCGCGGGTGGTGGAGGGGCGCAGCCGGCCGCGAAGAA GGAAGTGCAGCGCCAGGCGCGTCCCAAGCCGGCGCAGCGGGTGATGCCGACCCCCGTTCCCCGGCCCGAGCGGGTGGCGG AGGTGAAGCCGGAGACGCCCCCTGAGCCGGAGCCCGTGGTGGAGCCCGAGCCTGCTCCCGAGCCCACGGTGGCGAAGGCG GAGCCGGCGTCCGCGAGCAGCGAGGCGTCCGCGGTGGGCGGGGTGGTGGGTGGCGTGGTCGGCGGCGTCGTGGGTGGAAC GCAGGGCGGCATCGTCGGGTCGACGGCCATTGGCGGCACGGGTGACGCGCTGACGCTCAAGCAGGTGATGCGGCCCCCCA CGGTCCTCAAGCAGGTCAGGCCGGACTACCCCCGGCTGGCGAAGCAGCGGAACATCCAGGGCGTGGTGGTGGTGCGGGTC ATCGTTGGCACGGACGGCCGGGTGGAGCAGGAGCACACCCAGGTGATGCGCTCCGTGCCCGCCCTGGACGCTGCGGCGAT TGCCGCCGTGAATCAGTGGCACTTCACGCCCGCGCTGGGCCGTTCGGGGCGGCTGGCGCGAGTCATGATCGACATTCCGG TGAACTTCTCCCTGAAGTGA
Upstream 100 bases:
>100_bases ATTCCTCCGTGGACGACCGGACGGGCATTCCACCGCGCGTAAGAATTTTTACTCAGCGAGCGTTGACGGATGAGGGCCGT GGGGGGTATCCACGTCCGCA
Downstream 100 bases:
>100_bases GTCTGGCGCGGTGTCGCGCCGGGTTCGCTCCAGTTCTCCTCGCGTGGGCTCCGGCCCGCGCTGGAGCCGTTTCATGCGCA CCTTCCGAAACATCCTCTTC
Product: TonB family protein
Products: NA
Alternate protein names: NB Family Protein
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRVRTILNFELPEPAADAASSVLAQPTGALFRMGDAAGVEGFWSRWSGAVVVAVVLHAVVVAAGLSVSPASPKKVVREEP ELVLLAFAAPPPPPPAGGGGAQPAAKKEVQRQARPKPAQRVMPTPVPRPERVAEVKPETPPEPEPVVEPEPAPEPTVAKA EPASASSEASAVGGVVGGVVGGVVGGTQGGIVGSTAIGGTGDALTLKQVMRPPTVLKQVRPDYPRLAKQRNIQGVVVVRV IVGTDGRVEQEHTQVMRSVPALDAAAIAAVNQWHFTPALGRSGRLARVMIDIPVNFSLK
Sequences:
>Translated_299_residues MRVRTILNFELPEPAADAASSVLAQPTGALFRMGDAAGVEGFWSRWSGAVVVAVVLHAVVVAAGLSVSPASPKKVVREEP ELVLLAFAAPPPPPPAGGGGAQPAAKKEVQRQARPKPAQRVMPTPVPRPERVAEVKPETPPEPEPVVEPEPAPEPTVAKA EPASASSEASAVGGVVGGVVGGVVGGTQGGIVGSTAIGGTGDALTLKQVMRPPTVLKQVRPDYPRLAKQRNIQGVVVVRV IVGTDGRVEQEHTQVMRSVPALDAAAIAAVNQWHFTPALGRSGRLARVMIDIPVNFSLK >Mature_299_residues MRVRTILNFELPEPAADAASSVLAQPTGALFRMGDAAGVEGFWSRWSGAVVVAVVLHAVVVAAGLSVSPASPKKVVREEP ELVLLAFAAPPPPPPAGGGGAQPAAKKEVQRQARPKPAQRVMPTPVPRPERVAEVKPETPPEPEPVVEPEPAPEPTVAKA EPASASSEASAVGGVVGGVVGGVVGGTQGGIVGSTAIGGTGDALTLKQVMRPPTVLKQVRPDYPRLAKQRNIQGVVVVRV IVGTDGRVEQEHTQVMRSVPALDAAAIAAVNQWHFTPALGRSGRLARVMIDIPVNFSLK
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30882; Mature: 30882
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRTILNFELPEPAADAASSVLAQPTGALFRMGDAAGVEGFWSRWSGAVVVAVVLHAVV CCEEEEEECCCCCCHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHCCCHHHHHHHHHHHH VAAGLSVSPASPKKVVREEPELVLLAFAAPPPPPPAGGGGAQPAAKKEVQRQARPKPAQR HHHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH VMPTPVPRPERVAEVKPETPPEPEPVVEPEPAPEPTVAKAEPASASSEASAVGGVVGGVV CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GGVVGGTQGGIVGSTAIGGTGDALTLKQVMRPPTVLKQVRPDYPRLAKQRNIQGVVVVRV HHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCEEEEEEE IVGTDGRVEQEHTQVMRSVPALDAAAIAAVNQWHFTPALGRSGRLARVMIDIPVNFSLK EECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MRVRTILNFELPEPAADAASSVLAQPTGALFRMGDAAGVEGFWSRWSGAVVVAVVLHAVV CCEEEEEECCCCCCHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHCCCHHHHHHHHHHHH VAAGLSVSPASPKKVVREEPELVLLAFAAPPPPPPAGGGGAQPAAKKEVQRQARPKPAQR HHHCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHH VMPTPVPRPERVAEVKPETPPEPEPVVEPEPAPEPTVAKAEPASASSEASAVGGVVGGVV CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GGVVGGTQGGIVGSTAIGGTGDALTLKQVMRPPTVLKQVRPDYPRLAKQRNIQGVVVVRV HHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHCCCCEEEEEEE IVGTDGRVEQEHTQVMRSVPALDAAAIAAVNQWHFTPALGRSGRLARVMIDIPVNFSLK EECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA