| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is aatB [H]
Identifier: 108763673
GI number: 108763673
Start: 603538
End: 604842
Strand: Direct
Name: aatB [H]
Synonym: MXAN_0531
Alternate gene names: 108763673
Gene position: 603538-604842 (Clockwise)
Preceding gene: 108761276
Following gene: 108757049
Centisome position: 6.6
GC content: 69.2
Gene sequence:
>1305_bases ATGGCCCCCCTCGACCTGACCTCTCTTCCCCGCCCCTCCAAGGACGACGCCACCGTGGGAACGATGGCGCGTGGCATCGT CGGCAGCGAAATCCTCCGCATCGCGGCGGAGATTCGCGAGCGGATCGCCAAGGGCCAGAAGGTGTGCAACCTCACCGTGG GCGACTTCAACCCGCGCGAGTTCCCCATCCCCGACCCGCTGCGGGAGCACATCACCGCCGCGCTCCAGGCGGGCGAGACG AACTACCCGCCGGCGGATGGCGTGCTGGAGCTTCGTCAGGCCGTGCAGCGCTTCTATGAGCGCTCGCTGGGTCTGAAGTA CCCGCTGGAGGGCATCGTCATCGCGGGAGGCGCGCGGCCCATCATCTACGGCACGTACCGCAGCGTGCTGGATGCAGGGG AGACGGTCGTCTACCCGGTGCCTTCGTGGAACAACAACCACTACGCGCACATGATGGACGCGAAGAGCGCGGTGGTGGTG ACGGACGCCGCGCGGGGCTTCATGCCCACCGTGGAGCAATTGGCGCCGCACCTGGGCGCCGCGCGTCTCTTGTGCCTGTG CAGCCCGCTCAACCCCACCGGCACCATGATTGAGCCGGATGCGCTGGGCGCCATCTGCGAGCGCGTCGTCGCGGAGAACC GCGAGCGCGAGAAGCAGGGCCGCAAGCCGCTCATCCTCATGTACGACCAGATTTACTGGGTGCTGAGCTTCGGCGCGGCC AGACACGTCACGCCGGTGTCGCTGGTGCCGGAGGTGGCGCCGTACACGGTGTTCGTGGATGGCATCTCCAAGGCCTTCGC CGCCACGGGCGTGCGCGTGGGCTGGGGCGTGGGGCCGCCGACCATCATCGCTCGTATGCGGGACGTGCTCGGCCACGTGG GCGCCTGGGCCCCCAAGGCGGAGCAGGTCGCGGTGGCGCGCTACCTCGACGACACGGCGGCGACGGAGACCTTCCTGGAG GGGATGCGCAAGTCCGTGGAAGCGCGGCTGGAGGCCTTGCACAAGGGGTTCACGCGCATGCGCGAGGCGGGGCTGCCGGT GCAGCACATCGCGCCCCAGGGCGCCATCTACCTGTCGGTGCGCTTCGACCTGGTGGGCAAGGGGGGCCTGCGCTCCAACA ATGACATCCGCAAGCTCCTGCTGGAGAAGGCGAACCTGGGCGTGGTGCCCTTCCAGGCCTTCGGACTGGACGCGGACACG GGCTGGTTCCGCCTGTCGGTGGGGGCCACGTCGGTGAAGGAAATCGAGGAGGCGCTGCCCCGGGTGGAGGCGGCGCTCCG TGAGGTCCTCTCTTCCGGCGCGTAA
Upstream 100 bases:
>100_bases CACGAATGGATGACACAGGACGGTGGGGCCGCGACTATCGTCCGCGCCGCAAGTCGTCCGCGCGGCCCCCGAACGCGCAC GAACCGGAGAGCATGCTCCC
Downstream 100 bases:
>100_bases TCCTTGCGACATCTTCCCGCCGCGCTCGTTCCATCATGGAGGTCCTGGGAATACGTTGCCCGGGGCCTCGTTGGGCCGCT CACGTGAATTCCTCCATACT
Product: class I aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MAPLDLTSLPRPSKDDATVGTMARGIVGSEILRIAAEIRERIAKGQKVCNLTVGDFNPREFPIPDPLREHITAALQAGET NYPPADGVLELRQAVQRFYERSLGLKYPLEGIVIAGGARPIIYGTYRSVLDAGETVVYPVPSWNNNHYAHMMDAKSAVVV TDAARGFMPTVEQLAPHLGAARLLCLCSPLNPTGTMIEPDALGAICERVVAENREREKQGRKPLILMYDQIYWVLSFGAA RHVTPVSLVPEVAPYTVFVDGISKAFAATGVRVGWGVGPPTIIARMRDVLGHVGAWAPKAEQVAVARYLDDTAATETFLE GMRKSVEARLEALHKGFTRMREAGLPVQHIAPQGAIYLSVRFDLVGKGGLRSNNDIRKLLLEKANLGVVPFQAFGLDADT GWFRLSVGATSVKEIEEALPRVEAALREVLSSGA
Sequences:
>Translated_434_residues MAPLDLTSLPRPSKDDATVGTMARGIVGSEILRIAAEIRERIAKGQKVCNLTVGDFNPREFPIPDPLREHITAALQAGET NYPPADGVLELRQAVQRFYERSLGLKYPLEGIVIAGGARPIIYGTYRSVLDAGETVVYPVPSWNNNHYAHMMDAKSAVVV TDAARGFMPTVEQLAPHLGAARLLCLCSPLNPTGTMIEPDALGAICERVVAENREREKQGRKPLILMYDQIYWVLSFGAA RHVTPVSLVPEVAPYTVFVDGISKAFAATGVRVGWGVGPPTIIARMRDVLGHVGAWAPKAEQVAVARYLDDTAATETFLE GMRKSVEARLEALHKGFTRMREAGLPVQHIAPQGAIYLSVRFDLVGKGGLRSNNDIRKLLLEKANLGVVPFQAFGLDADT GWFRLSVGATSVKEIEEALPRVEAALREVLSSGA >Mature_433_residues APLDLTSLPRPSKDDATVGTMARGIVGSEILRIAAEIRERIAKGQKVCNLTVGDFNPREFPIPDPLREHITAALQAGETN YPPADGVLELRQAVQRFYERSLGLKYPLEGIVIAGGARPIIYGTYRSVLDAGETVVYPVPSWNNNHYAHMMDAKSAVVVT DAARGFMPTVEQLAPHLGAARLLCLCSPLNPTGTMIEPDALGAICERVVAENREREKQGRKPLILMYDQIYWVLSFGAAR HVTPVSLVPEVAPYTVFVDGISKAFAATGVRVGWGVGPPTIIARMRDVLGHVGAWAPKAEQVAVARYLDDTAATETFLEG MRKSVEARLEALHKGFTRMREAGLPVQHIAPQGAIYLSVRFDLVGKGGLRSNNDIRKLLLEKANLGVVPFQAFGLDADTG WFRLSVGATSVKEIEEALPRVEAALREVLSSGA
Specific function: Involved in symbiotic nitrogen fixation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788627, Length=249, Percent_Identity=24.0963855421687, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1786816, Length=364, Percent_Identity=22.5274725274725, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 47094; Mature: 46963
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLDLTSLPRPSKDDATVGTMARGIVGSEILRIAAEIRERIAKGQKVCNLTVGDFNPRE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC FPIPDPLREHITAALQAGETNYPPADGVLELRQAVQRFYERSLGLKYPLEGIVIAGGARP CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC IIYGTYRSVLDAGETVVYPVPSWNNNHYAHMMDAKSAVVVTDAARGFMPTVEQLAPHLGA EEEHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHH ARLLCLCSPLNPTGTMIEPDALGAICERVVAENREREKQGRKPLILMYDQIYWVLSFGAA HHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCH RHVTPVSLVPEVAPYTVFVDGISKAFAATGVRVGWGVGPPTIIARMRDVLGHVGAWAPKA HCCCCHHHCCCCCCCEEEEHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCH EQVAVARYLDDTAATETFLEGMRKSVEARLEALHKGFTRMREAGLPVQHIAPQGAIYLSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEE RFDLVGKGGLRSNNDIRKLLLEKANLGVVPFQAFGLDADTGWFRLSVGATSVKEIEEALP EEEEEECCCCCCCHHHHHHHHHHCCCCEEEHHHCCCCCCCCEEEEECCCHHHHHHHHHHH RVEAALREVLSSGA HHHHHHHHHHHCCC >Mature Secondary Structure APLDLTSLPRPSKDDATVGTMARGIVGSEILRIAAEIRERIAKGQKVCNLTVGDFNPRE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC FPIPDPLREHITAALQAGETNYPPADGVLELRQAVQRFYERSLGLKYPLEGIVIAGGARP CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC IIYGTYRSVLDAGETVVYPVPSWNNNHYAHMMDAKSAVVVTDAARGFMPTVEQLAPHLGA EEEHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHH ARLLCLCSPLNPTGTMIEPDALGAICERVVAENREREKQGRKPLILMYDQIYWVLSFGAA HHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCH RHVTPVSLVPEVAPYTVFVDGISKAFAATGVRVGWGVGPPTIIARMRDVLGHVGAWAPKA HCCCCHHHCCCCCCCEEEEHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCH EQVAVARYLDDTAATETFLEGMRKSVEARLEALHKGFTRMREAGLPVQHIAPQGAIYLSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEE RFDLVGKGGLRSNNDIRKLLLEKANLGVVPFQAFGLDADTGWFRLSVGATSVKEIEEALP EEEEEECCCCCCCHHHHHHHHHHCCCCEEEHHHCCCCCCCCEEEEECCCHHHHHHHHHHH RVEAALREVLSSGA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]