| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108763619
Identifier: 108763619
GI number: 108763619
Start: 1506079
End: 1507479
Strand: Direct
Name: 108763619
Synonym: MXAN_1287
Alternate gene names: NA
Gene position: 1506079-1507479 (Clockwise)
Preceding gene: 108762396
Following gene: 108763650
Centisome position: 16.48
GC content: 68.88
Gene sequence:
>1401_bases ATGAGGCTGACGCTCATCGGGCACGCATCGCTCCTCATCGAGACGGCGGACTGCCGCGTCCTGATGGACCCTGTCCTGTG GGATCCTCACCAGGAAGGACTGTTCCACGTCCATCCCGCCCGGGAGGTGCTGCACGCACGGCTCCCTCCTCTCGATGTGC TGGTCATCTCGCATCGGCATCTCGACCACTTCGACATCCGGAGCCTCGCGCACCTGCCCCGCCAGGTTCAGGTCGTCGTT CCCCAGGACCCGTTGCTCGAGAAGTCGTTGCGGGCGCTCGGCTTCGAGGAGGTCCATGCGCTGGCTCCGCTCACGGAGTT CTTCGTGGGGGGCACGCGCTTCGTGACGACCCCGTCGCGGGCGCCGGTGCGTGAGTTCGGCCTGGTGATTCAGGACGAGA CGGGCACCTGCTTCAACGCCGTGGATACCGTGCTGGATGCGTCGGCCGTGGCGGCGGTCCGGCAGGTCGCTCCGACGCTC GACGTGTTTCTGGCCTCCTGGCAGCCGATGCTGGAGGTGGACTTCCAGTGGAACAGGCCGGTCGCGTTTCCAGTCCAGCG CTATGCCGAGCTGCTCGGGCACGTGGCGGCGCTCGAGCCGCGGGCAGTCGTTCCGGGCGCCAATGGGTTTCGCTACTGTG GCATCTCCTCGTGGCTGAACCAGGTGGTGTTCCCCGTGTCCCGCGCGCGCTTCTGCGTGGACGTGAAGCGGGCCCGGGGG GACTGTGCGGTGTTCCCCATGGACCCGGGGGACGTGCTGGAGTTCGGAGCGGCAGGGTTTCGCCTCGACGCGGGAGGCGC CTCCTTCGTGCGGCGGCTCCCGGAGGCCCGCGTGTCCCTGGACTACCGTCCGGTGGACTTCGATGGGCGCCTGGTGGATG GGCCCTGCGCACCGGATGAAGCGGCGGCCATCCGCGCCTCCGTGGAGCGAGTGATGGACGTCGAGTTGCCACGCTTCCTG GAGGAAGCCGACGCGACGTGCTGGCGCCTTCACCAGCAACATGGCGTCGTCCAGCAGCTCGAGGTCGTGTTCCCGGACGA GCGGCTGTCCTGGTGTATCGACTTCACGGCGAGCCCTCCGCGGATGGCGCGGGGCGCCAGCTCGCTGGCCACGGTCCATT CCCTGGTGACGGCCTCGGTGCTCCACGGCATCGCCTCGGGGACGCGGACGTGGGACTACGCCATCATGGGTGGCTTCTAC CGCCGGTTCTTGACGTTCGAGCCGCAGGCGCCTCTCTCGGATCCGCTGCGTCTGCGGTTTCCCTCAGGCCAGGCCCAGGC GAGCGTCATCGAGGCCGAGGTGGCCCGCTGGGCCGGTGTCAGGCCGCTTTCCTCGGCGCGTGCTCCGCGCGCGCTGCTCC AGCGATGTGGGGTTTTCCCGACAGGGGCTACGGCACGATGA
Upstream 100 bases:
>100_bases TCCTTGGACGAGGAGGCCGTTACGCGCGGTACTGGGACCTCCAGGTCAACCAGAAGGAGCTCCCGCCGGACGCCTTTCCT GGGCGCGGAGGGCTGCCTTC
Downstream 100 bases:
>100_bases ACCTACTTGGCGTCTATATTGGTCTTCACGACAGCAACGTTGCCCTCTCGGTGGATGGCCGGGTCCGCTATGCGAAGTCC GAGCGGCTCACGGGCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MRLTLIGHASLLIETADCRVLMDPVLWDPHQEGLFHVHPAREVLHARLPPLDVLVISHRHLDHFDIRSLAHLPRQVQVVV PQDPLLEKSLRALGFEEVHALAPLTEFFVGGTRFVTTPSRAPVREFGLVIQDETGTCFNAVDTVLDASAVAAVRQVAPTL DVFLASWQPMLEVDFQWNRPVAFPVQRYAELLGHVAALEPRAVVPGANGFRYCGISSWLNQVVFPVSRARFCVDVKRARG DCAVFPMDPGDVLEFGAAGFRLDAGGASFVRRLPEARVSLDYRPVDFDGRLVDGPCAPDEAAAIRASVERVMDVELPRFL EEADATCWRLHQQHGVVQQLEVVFPDERLSWCIDFTASPPRMARGASSLATVHSLVTASVLHGIASGTRTWDYAIMGGFY RRFLTFEPQAPLSDPLRLRFPSGQAQASVIEAEVARWAGVRPLSSARAPRALLQRCGVFPTGATAR
Sequences:
>Translated_466_residues MRLTLIGHASLLIETADCRVLMDPVLWDPHQEGLFHVHPAREVLHARLPPLDVLVISHRHLDHFDIRSLAHLPRQVQVVV PQDPLLEKSLRALGFEEVHALAPLTEFFVGGTRFVTTPSRAPVREFGLVIQDETGTCFNAVDTVLDASAVAAVRQVAPTL DVFLASWQPMLEVDFQWNRPVAFPVQRYAELLGHVAALEPRAVVPGANGFRYCGISSWLNQVVFPVSRARFCVDVKRARG DCAVFPMDPGDVLEFGAAGFRLDAGGASFVRRLPEARVSLDYRPVDFDGRLVDGPCAPDEAAAIRASVERVMDVELPRFL EEADATCWRLHQQHGVVQQLEVVFPDERLSWCIDFTASPPRMARGASSLATVHSLVTASVLHGIASGTRTWDYAIMGGFY RRFLTFEPQAPLSDPLRLRFPSGQAQASVIEAEVARWAGVRPLSSARAPRALLQRCGVFPTGATAR >Mature_466_residues MRLTLIGHASLLIETADCRVLMDPVLWDPHQEGLFHVHPAREVLHARLPPLDVLVISHRHLDHFDIRSLAHLPRQVQVVV PQDPLLEKSLRALGFEEVHALAPLTEFFVGGTRFVTTPSRAPVREFGLVIQDETGTCFNAVDTVLDASAVAAVRQVAPTL DVFLASWQPMLEVDFQWNRPVAFPVQRYAELLGHVAALEPRAVVPGANGFRYCGISSWLNQVVFPVSRARFCVDVKRARG DCAVFPMDPGDVLEFGAAGFRLDAGGASFVRRLPEARVSLDYRPVDFDGRLVDGPCAPDEAAAIRASVERVMDVELPRFL EEADATCWRLHQQHGVVQQLEVVFPDERLSWCIDFTASPPRMARGASSLATVHSLVTASVLHGIASGTRTWDYAIMGGFY RRFLTFEPQAPLSDPLRLRFPSGQAQASVIEAEVARWAGVRPLSSARAPRALLQRCGVFPTGATAR
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51420; Mature: 51420
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLIGHASLLIETADCRVLMDPVLWDPHQEGLFHVHPAREVLHARLPPLDVLVISHRH CEEEEEECCEEEEEECCCEEEECCCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEECCCC LDHFDIRSLAHLPRQVQVVVPQDPLLEKSLRALGFEEVHALAPLTEFFVGGTRFVTTPSR CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCC APVREFGLVIQDETGTCFNAVDTVLDASAVAAVRQVAPTLDVFLASWQPMLEVDFQWNRP CCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC VAFPVQRYAELLGHVAALEPRAVVPGANGFRYCGISSWLNQVVFPVSRARFCVDVKRARG EECHHHHHHHHHHHHHHCCCCEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCC DCAVFPMDPGDVLEFGAAGFRLDAGGASFVRRLPEARVSLDYRPVDFDGRLVDGPCAPDE CEEEEECCCCHHHHHCCCCEEECCCCHHHHHHCCHHHHEECCCCCCCCCEEECCCCCCCH AAAIRASVERVMDVELPRFLEEADATCWRLHQQHGVVQQLEVVFPDERLSWCIDFTASPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCEEEEEECCCCCH RMARGASSLATVHSLVTASVLHGIASGTRTWDYAIMGGFYRRFLTFEPQAPLSDPLRLRF HHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCCCCEEEEC PSGQAQASVIEAEVARWAGVRPLSSARAPRALLQRCGVFPTGATAR CCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRLTLIGHASLLIETADCRVLMDPVLWDPHQEGLFHVHPAREVLHARLPPLDVLVISHRH CEEEEEECCEEEEEECCCEEEECCCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEECCCC LDHFDIRSLAHLPRQVQVVVPQDPLLEKSLRALGFEEVHALAPLTEFFVGGTRFVTTPSR CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCC APVREFGLVIQDETGTCFNAVDTVLDASAVAAVRQVAPTLDVFLASWQPMLEVDFQWNRP CCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC VAFPVQRYAELLGHVAALEPRAVVPGANGFRYCGISSWLNQVVFPVSRARFCVDVKRARG EECHHHHHHHHHHHHHHCCCCEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCC DCAVFPMDPGDVLEFGAAGFRLDAGGASFVRRLPEARVSLDYRPVDFDGRLVDGPCAPDE CEEEEECCCCHHHHHCCCCEEECCCCHHHHHHCCHHHHEECCCCCCCCCEEECCCCCCCH AAAIRASVERVMDVELPRFLEEADATCWRLHQQHGVVQQLEVVFPDERLSWCIDFTASPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCEEEEEECCCCCH RMARGASSLATVHSLVTASVLHGIASGTRTWDYAIMGGFYRRFLTFEPQAPLSDPLRLRF HHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCCCCEEEEC PSGQAQASVIEAEVARWAGVRPLSSARAPRALLQRCGVFPTGATAR CCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA