| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is gmk
Identifier: 108763567
GI number: 108763567
Start: 5899453
End: 5900082
Strand: Reverse
Name: gmk
Synonym: MXAN_4705
Alternate gene names: 108763567
Gene position: 5900082-5899453 (Counterclockwise)
Preceding gene: 108757110
Following gene: 108761760
Centisome position: 64.55
GC content: 64.76
Gene sequence:
>630_bases ATGAACGCGAATACCGTGCTCCCGCCTGGCTTGTTGCTCGTGCTCTCCGCTCCTTCCGGGGCGGGGAAGACCACCCTCGC GCACCGGCTCCTCAAGGAGACGCCGGATGCGGTGTTCTCCATCAGCGTCACCACCCGAAGGCCTCGGGGGAAGGAGCGCG AGGGGGTGGATTACAACTTCGTCGACGTCGCGACCTTCCAGTCGAAGATCGAGCGCGGCGAGTTCGTGGAGTGGGCAGAG GTCTATGGCCACTTCTATGGAAGCCCCCAGTCGGTGGTGGATGAGGCGCGCGCCCGCAAGAGCGCTGCCATCTTCGACAT CGACGTGCAGGGCGGGCAGGCCATCAAGCGCAAGCACCCGGATGCAGTGACCATCTTCGTGCTGCCACCGTCCATGGAAG AGTTGGAGCGCCGCCTGAGGGATCGTCAGACGGACTCCGACGAGACCATCCGGCGCCGGATGCTGGCGGCTCGCTCTGAG ATCGAGCGGGGTATCGCTTCCTACGACTACGTGGTCGTGAATGACGACTTCGAGCGTGCTTTCAGTGACCTGCGCTCGGT GGTGGTGGCCGAACGTTGCCGGCGCGAACGTGTGGACGTGTCGAAGCTGGGCCTGGGAATCGGCGGCTGA
Upstream 100 bases:
>100_bases ACACGACCGGCTCCAAGAGCCAGCACGCCGAGATTTCCGTGCGCGTGGTGGCGATGAAGGCCGAGGTCGAGCGCATCCGC GAACAGGTGCAGAACGTCGA
Downstream 100 bases:
>100_bases CCACCGCGGCGCAAGTGCTCAGAATCAAACTTCTTGCGCAGTCCGATCTCTTGGTGGATAAGCGGCCACACCTCGCCGCG TTGCGCGGGCGTCACACAGG
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MNANTVLPPGLLLVLSAPSGAGKTTLAHRLLKETPDAVFSISVTTRRPRGKEREGVDYNFVDVATFQSKIERGEFVEWAE VYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHPDAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSE IERGIASYDYVVVNDDFERAFSDLRSVVVAERCRRERVDVSKLGLGIGG
Sequences:
>Translated_209_residues MNANTVLPPGLLLVLSAPSGAGKTTLAHRLLKETPDAVFSISVTTRRPRGKEREGVDYNFVDVATFQSKIERGEFVEWAE VYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHPDAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSE IERGIASYDYVVVNDDFERAFSDLRSVVVAERCRRERVDVSKLGLGIGG >Mature_209_residues MNANTVLPPGLLLVLSAPSGAGKTTLAHRLLKETPDAVFSISVTTRRPRGKEREGVDYNFVDVATFQSKIERGEFVEWAE VYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHPDAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSE IERGIASYDYVVVNDDFERAFSDLRSVVVAERCRRERVDVSKLGLGIGG
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=189, Percent_Identity=38.0952380952381, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI226874833, Length=189, Percent_Identity=38.0952380952381, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI4504221, Length=189, Percent_Identity=38.0952380952381, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI52630447, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI21361598, Length=198, Percent_Identity=23.7373737373737, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI38570142, Length=178, Percent_Identity=25.8426966292135, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI14780902, Length=188, Percent_Identity=26.063829787234, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21389483, Length=178, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI262118259, Length=174, Percent_Identity=25.2873563218391, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI4505237, Length=174, Percent_Identity=25.2873563218391, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI262118255, Length=174, Percent_Identity=25.2873563218391, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI262118263, Length=174, Percent_Identity=25.2873563218391, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI1790080, Length=193, Percent_Identity=45.5958549222798, Blast_Score=167, Evalue=5e-43, Organism=Caenorhabditis elegans, GI193203132, Length=180, Percent_Identity=38.8888888888889, Blast_Score=130, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17508835, Length=180, Percent_Identity=38.8888888888889, Blast_Score=130, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17557440, Length=181, Percent_Identity=25.9668508287293, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=41.5300546448087, Blast_Score=155, Evalue=5e-39, Organism=Drosophila melanogaster, GI21356141, Length=192, Percent_Identity=39.5833333333333, Blast_Score=140, Evalue=8e-34, Organism=Drosophila melanogaster, GI161077626, Length=173, Percent_Identity=25.4335260115607, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007136, Length=173, Percent_Identity=25.4335260115607, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI45554481, Length=173, Percent_Identity=25.4335260115607, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI85724806, Length=173, Percent_Identity=25.4335260115607, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI45554489, Length=173, Percent_Identity=25.4335260115607, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24640542, Length=173, Percent_Identity=25.4335260115607, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_MYXXD (Q1D3A6)
Other databases:
- EMBL: CP000113 - RefSeq: YP_632867.1 - ProteinModelPortal: Q1D3A6 - SMR: Q1D3A6 - STRING: Q1D3A6 - GeneID: 4107326 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_4705 - TIGR: MXAN_4705 - eggNOG: COG0194 - HOGENOM: HBG671982 - OMA: EWAEFAG - PhylomeDB: Q1D3A6 - ProtClustDB: PRK00300 - BioCyc: MXAN246197:MXAN_4705-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 23382; Mature: 23382
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANTVLPPGLLLVLSAPSGAGKTTLAHRLLKETPDAVFSISVTTRRPRGKEREGVDYNF CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCH VDVATFQSKIERGEFVEWAEVYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHP HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCC DAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSEIERGIASYDYVVVNDDFERA CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHH FSDLRSVVVAERCRRERVDVSKLGLGIGG HHHHHHHHHHHHHHHHCCCHHHHCCCCCC >Mature Secondary Structure MNANTVLPPGLLLVLSAPSGAGKTTLAHRLLKETPDAVFSISVTTRRPRGKEREGVDYNF CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCH VDVATFQSKIERGEFVEWAEVYGHFYGSPQSVVDEARARKSAAIFDIDVQGGQAIKRKHP HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCC DAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSEIERGIASYDYVVVNDDFERA CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHH FSDLRSVVVAERCRRERVDVSKLGLGIGG HHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA