| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108763565
Identifier: 108763565
GI number: 108763565
Start: 1819535
End: 1821403
Strand: Direct
Name: 108763565
Synonym: MXAN_1549
Alternate gene names: NA
Gene position: 1819535-1821403 (Clockwise)
Preceding gene: 108762864
Following gene: 108761119
Centisome position: 19.91
GC content: 71.91
Gene sequence:
>1869_bases ATGAGCGCGCGTCCTTCGAGCGGGGGGCTCCCCGTGACGCTGGCCTTCGTCTCGGGCCTGCTGGCGGTCTTCCTCGGTGA GCGGCTCTTTGGCATCGGCACGGGCCGCACTGTCCTGTCTGGCCTGGGCGTGGCGGTGGCGGTGGGCGCGCTGGGGTGGC GCTTCGCGCGCATGCGGTCGGCCAGCGCGGACCGGCGCGCCGTCGAGGCGTGGGTGTCAGGCCTGTACGGCGTGGGTCTC CTGGCCCTGGGGCTCTACTTCGTCCAGTCGGACGTGGGCACCGGGCTCTTCGGCGGCCCCTTGTCCCAGAAGGCGCCTCG GCTGGCGGTGTCGCTGGCGGCGCTCTTCCCGGCGTTGCTCGCGTGCTGCTTGCTGCCGCTGGCGATGGTGGAGGTCGCCG CCGCGGCGATGACGCGCGCACCCGTGCTGGAGACGGGCCGTGTCCGCAGCGCGCTGTATTCCGGGCTGGGGCTGGCCTTC GTGCTCGTCTTCGCCTTCGCGTCCATGTTCGTCGCCACCCAGGCCGATGTGACGTGGGACCTGTCCTACTTCCGCACCGC GAAGCCCGGCGACGGCACGCGCAAGGTGATTCGCGGACTCAATGAGCCGCTCCAGGTGACGCTCTTCTTCCCGCCCGCGA ACGAGGTGGGCGAAGCGGTGGGGCAGTACTTCCGCGACCTGTCGGTGGAGAGTCCGGGCCTGCTCAACGTGGTGCGGCTG GACCAGGCGGTGGAGCCGGCTCGGGCGAGGTCGCTGGGCGTCCACAACAACGGCACCATCGTCCTGGCGCGCGGCGACCG GAAGGAGCCGCTCACGGTGGGCCTGGAAGTCGAGCGGGCGCGCGGCCAGCTCCAGCGGTTGGACCAGGAGGTCCAACGCC GCCTGCTGACGGTGGCCCGGCCTCGTCGGGTCGTCTACTTCACGTCCGGCCACGGTGAGCGCGCCGAGTCGCGAGCGGTG CCGGGCGAGACGACCCGCCCGTCCGTGGAGAAGCTGAAGGAGTTGCTGCGCGCGCAGAACGTGGACGTGCGGCCGCTCGG TGTCTCCGAGGGCCTGGGCACCGAGGTGCCGCGTGACGCCTCCGTGGTGGTGGTGGCGGGCCCGACGCAGGAGTTCCTCC CCGAGGAGCTGAATGCCTTGCGTGAGTACTCCGCGCGCGGTGGCCGGCTGTGGCTGGCGCTGGAGCCGGAGGGACCGGAC TTCCAGCCGCTGCTGGAGCCCCTGGGCCTGAAGTACCTCAAGACGCCGCTGGCCAATGACCAGGTGTACTTCCGCACGTC GCGGCAGCAGAGCGACCGCGGCAACCTGGGCACGGCGACGTTCTCCTCGCACCCGTCCGTCACGTCGCTGTCGTCGTTGG CGGGACAGGCGCCGGCCGTCTTCCTGAGCGCGGGCGCCCTGGAGCAGATTCAGCCGTTGCCGGGTGGCATGGCGCAGGAC GTGTCGGTGCGCGCGCACGGCGCCACCTTCGCGGACGCCAATGGCAACTTCACGTTGGACGCGGGCGAGATGCGGCGGCC CTGGCCCCTGGTCATCGCGGTGGAGAAGCCCGCGCCGGCCGGCCAAGCGGCGATGCGCGCCGTGGTGATGGCGGACGCGG ACGCGGTGAGTGACTTGCTGATGGGCAACATGGGCAACGCGTACCTGGCGGTGGACACGCTGCGGTGGCTCACCGGTGAG GAGTCCATCTCCGGCGCCGTGTCCTCGGAGGAAGACACGCCCATCCAGCACACGCGGGAGCAGGACGTCCTCTGGTTCTA CGCGACGGTGTTCCTGGGGCCAGCCCTGGTGCTGGCGGTGGGCTTCGTGACGACGCGCCGGCGGGGACGACGCGCGCCGC GCCCCGCGGTGGCGGGAGGTGAGCGATGA
Upstream 100 bases:
>100_bases AGGCGGGGCTCATCCACGTGCGTGACGTCGTCTACTACCTCGTGGTCACCTACGTGGCGTTGTTCGCGGCCACGCGGGTG CTCGAGGCGCGGAGGTGGCG
Downstream 100 bases:
>100_bases AGGTTCGGGACCTGGCCCTCCAAGGGGCCCTGGCGGCGGCCGCGTTGATCGCCGCGTTCGTTGTCTGGCAGCGCGAGCCC TCCGCGGGCCCGGGTGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MSARPSSGGLPVTLAFVSGLLAVFLGERLFGIGTGRTVLSGLGVAVAVGALGWRFARMRSASADRRAVEAWVSGLYGVGL LALGLYFVQSDVGTGLFGGPLSQKAPRLAVSLAALFPALLACCLLPLAMVEVAAAAMTRAPVLETGRVRSALYSGLGLAF VLVFAFASMFVATQADVTWDLSYFRTAKPGDGTRKVIRGLNEPLQVTLFFPPANEVGEAVGQYFRDLSVESPGLLNVVRL DQAVEPARARSLGVHNNGTIVLARGDRKEPLTVGLEVERARGQLQRLDQEVQRRLLTVARPRRVVYFTSGHGERAESRAV PGETTRPSVEKLKELLRAQNVDVRPLGVSEGLGTEVPRDASVVVVAGPTQEFLPEELNALREYSARGGRLWLALEPEGPD FQPLLEPLGLKYLKTPLANDQVYFRTSRQQSDRGNLGTATFSSHPSVTSLSSLAGQAPAVFLSAGALEQIQPLPGGMAQD VSVRAHGATFADANGNFTLDAGEMRRPWPLVIAVEKPAPAGQAAMRAVVMADADAVSDLLMGNMGNAYLAVDTLRWLTGE ESISGAVSSEEDTPIQHTREQDVLWFYATVFLGPALVLAVGFVTTRRRGRRAPRPAVAGGER
Sequences:
>Translated_622_residues MSARPSSGGLPVTLAFVSGLLAVFLGERLFGIGTGRTVLSGLGVAVAVGALGWRFARMRSASADRRAVEAWVSGLYGVGL LALGLYFVQSDVGTGLFGGPLSQKAPRLAVSLAALFPALLACCLLPLAMVEVAAAAMTRAPVLETGRVRSALYSGLGLAF VLVFAFASMFVATQADVTWDLSYFRTAKPGDGTRKVIRGLNEPLQVTLFFPPANEVGEAVGQYFRDLSVESPGLLNVVRL DQAVEPARARSLGVHNNGTIVLARGDRKEPLTVGLEVERARGQLQRLDQEVQRRLLTVARPRRVVYFTSGHGERAESRAV PGETTRPSVEKLKELLRAQNVDVRPLGVSEGLGTEVPRDASVVVVAGPTQEFLPEELNALREYSARGGRLWLALEPEGPD FQPLLEPLGLKYLKTPLANDQVYFRTSRQQSDRGNLGTATFSSHPSVTSLSSLAGQAPAVFLSAGALEQIQPLPGGMAQD VSVRAHGATFADANGNFTLDAGEMRRPWPLVIAVEKPAPAGQAAMRAVVMADADAVSDLLMGNMGNAYLAVDTLRWLTGE ESISGAVSSEEDTPIQHTREQDVLWFYATVFLGPALVLAVGFVTTRRRGRRAPRPAVAGGER >Mature_621_residues SARPSSGGLPVTLAFVSGLLAVFLGERLFGIGTGRTVLSGLGVAVAVGALGWRFARMRSASADRRAVEAWVSGLYGVGLL ALGLYFVQSDVGTGLFGGPLSQKAPRLAVSLAALFPALLACCLLPLAMVEVAAAAMTRAPVLETGRVRSALYSGLGLAFV LVFAFASMFVATQADVTWDLSYFRTAKPGDGTRKVIRGLNEPLQVTLFFPPANEVGEAVGQYFRDLSVESPGLLNVVRLD QAVEPARARSLGVHNNGTIVLARGDRKEPLTVGLEVERARGQLQRLDQEVQRRLLTVARPRRVVYFTSGHGERAESRAVP GETTRPSVEKLKELLRAQNVDVRPLGVSEGLGTEVPRDASVVVVAGPTQEFLPEELNALREYSARGGRLWLALEPEGPDF QPLLEPLGLKYLKTPLANDQVYFRTSRQQSDRGNLGTATFSSHPSVTSLSSLAGQAPAVFLSAGALEQIQPLPGGMAQDV SVRAHGATFADANGNFTLDAGEMRRPWPLVIAVEKPAPAGQAAMRAVVMADADAVSDLLMGNMGNAYLAVDTLRWLTGEE SISGAVSSEEDTPIQHTREQDVLWFYATVFLGPALVLAVGFVTTRRRGRRAPRPAVAGGER
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66329; Mature: 66198
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARPSSGGLPVTLAFVSGLLAVFLGERLFGIGTGRTVLSGLGVAVAVGALGWRFARMRS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC ASADRRAVEAWVSGLYGVGLLALGLYFVQSDVGTGLFGGPLSQKAPRLAVSLAALFPALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ACCLLPLAMVEVAAAAMTRAPVLETGRVRSALYSGLGLAFVLVFAFASMFVATQADVTWD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LSYFRTAKPGDGTRKVIRGLNEPLQVTLFFPPANEVGEAVGQYFRDLSVESPGLLNVVRL HHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEHHHH DQAVEPARARSLGVHNNGTIVLARGDRKEPLTVGLEVERARGQLQRLDQEVQRRLLTVAR HHHCCCHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC PRRVVYFTSGHGERAESRAVPGETTRPSVEKLKELLRAQNVDVRPLGVSEGLGTEVPRDA CCEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SVVVVAGPTQEFLPEELNALREYSARGGRLWLALEPEGPDFQPLLEPLGLKYLKTPLAND CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCHHHHHCCCCCC QVYFRTSRQQSDRGNLGTATFSSHPSVTSLSSLAGQAPAVFLSAGALEQIQPLPGGMAQD EEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCC VSVRAHGATFADANGNFTLDAGEMRRPWPLVIAVEKPAPAGQAAMRAVVMADADAVSDLL CEEEECCCEEECCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHH MGNMGNAYLAVDTLRWLTGEESISGAVSSEEDTPIQHTREQDVLWFYATVFLGPALVLAV HCCCCCEEEEEHHHHHHCCCHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH GFVTTRRRGRRAPRPAVAGGER HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SARPSSGGLPVTLAFVSGLLAVFLGERLFGIGTGRTVLSGLGVAVAVGALGWRFARMRS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC ASADRRAVEAWVSGLYGVGLLALGLYFVQSDVGTGLFGGPLSQKAPRLAVSLAALFPALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ACCLLPLAMVEVAAAAMTRAPVLETGRVRSALYSGLGLAFVLVFAFASMFVATQADVTWD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LSYFRTAKPGDGTRKVIRGLNEPLQVTLFFPPANEVGEAVGQYFRDLSVESPGLLNVVRL HHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEHHHH DQAVEPARARSLGVHNNGTIVLARGDRKEPLTVGLEVERARGQLQRLDQEVQRRLLTVAR HHHCCCHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC PRRVVYFTSGHGERAESRAVPGETTRPSVEKLKELLRAQNVDVRPLGVSEGLGTEVPRDA CCEEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SVVVVAGPTQEFLPEELNALREYSARGGRLWLALEPEGPDFQPLLEPLGLKYLKTPLAND CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCHHHHHCCCCCC QVYFRTSRQQSDRGNLGTATFSSHPSVTSLSSLAGQAPAVFLSAGALEQIQPLPGGMAQD EEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCC VSVRAHGATFADANGNFTLDAGEMRRPWPLVIAVEKPAPAGQAAMRAVVMADADAVSDLL CEEEECCCEEECCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHH MGNMGNAYLAVDTLRWLTGEESISGAVSSEEDTPIQHTREQDVLWFYATVFLGPALVLAV HCCCCCEEEEEHHHHHHCCCHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH GFVTTRRRGRRAPRPAVAGGER HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA