| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763515
Identifier: 108763515
GI number: 108763515
Start: 3614991
End: 3616811
Strand: Direct
Name: 108763515
Synonym: MXAN_3091
Alternate gene names: NA
Gene position: 3614991-3616811 (Clockwise)
Preceding gene: 108759627
Following gene: 108759692
Centisome position: 39.55
GC content: 71.0
Gene sequence:
>1821_bases GTGACACCGGCGCAGGCACCGCTGACGCTGCTGCGAATCCCAGGGGATTCCCCCGAGGCCCTGGACACCTTCTGGCTGCG CGAGGTCTTTCAGGGGGACCGGGTGCCACAGCTCACCCTGCGGGCGGTGCTGCTCGGAAGTGGCATTGGTGCCATCACCT GCGCGACCAACCTCTACGCGGGCCTGAAGATGGCCGTGGCCTTTCCCGTGGCCATCACCGCCGCGTTGCTCGCGCACACG GCACACGGAGCGATGCGGCGCGTGGCGCCGGGCGTCGCGGGTGCTCCGCTTTCGCCGCTGGAGACGTGCTCTGCGCAGGC CGTGGCTTCGTCCGCGGGCTATGCGACGGGCGGCGCCCTGGTATCCGTTCAGGGCGCGTGGTTGCTCACGACGGGCAGTC ATCCCCCCGCGTGGGCGTTGCTCGCGTGGACCTTCCTCCTGTCCGCGCTGGGCGTGCTCTTCGCGGTGCCCCTCAAGCGC AAGCTGGTGGACCATGAGCAGCTTCCGTTCGCCACGGGCACGGCCGCGGCGGCGACCATCCGTGCTCTTCACACCACGGG CGCGTCGTCCCGTCCGCGGCTGTCGATGCTGGGCCTGGGCGGAGGTATCGCCGCGCTCGTCACCCTGGTGCGGGATGGGC TGGGCCGCCTTCCCTACGTGTTTCCTTTCCCCGGAACGCTGAGCGGGATGTCGCTGGAGCGCCTGGGCTTTGGCTTCGAG ATGAGTCTGCTTCCGCTGGGCGCGGGCGCGCTGCTGGGACTGCGGCTCACGGCGTCCTGGTTCCTGGGCGCGCTGCTCAT TCACGGAGTCGTGGCACCGCGCGTGTTCGCTTCGGGGCTGCTGCTTCCAGATGGAGACTTCCTCGCCTGGAGTCTCTGGC CCGGAACGGCGGCGCTCACCACCGCGTCGTTGTTGCACTTCGCGCTGGAGGGCCGCGTCCTGGGGCGCGCATTGAAGGGA CTCTTCAAACGTCCCTCCGTGGCGCCCCATCCGGTGGACGCACTTCAGGTGCCGGGACGCTGGCTGTTGGCGGGCCTGGT CGTGTTGACGCCCGCCACGCTCGCCGTGGCCAAGGTGGGCTTTGGCGTTCCGCTGCCACACGCCGCGCTCGCGGTGGCGT TGTCATTCGTGCTGTGTCTCATCGCCTGCCGCGTCACGGGGGAGACGGATGTCACGCCCGTGGGCCCGCTGGGGCAGGTG ACGCAGATGACCTATGGCGTGCTGCTGCCGCGCAACGTGGAGGCGAACCTCGCCACCGCGGGCATCACCGTCAACGCGGC GTCGTCCGCGGCGGACCTCCTCAGTGACGCGAAGACGGGACACCTGTTGGGGGCCCATCCCCGCCGCGTGTTCCTGGCGC AGCTCGTGGGTTGCGCGGTGGGGGCCGCCGCGGTGGTGCCGCTGTTCTTCCTGTTGGTGCCGGACCGTTCGGCGCTGGGG GGCGAGCGCTTCCCCGCACCCGCCGCCACGGTCACCGCCAGCATCGCCCAGGTGCTGGCTTCGGGCTTCTCGGGGTTGGA GCCGGGCACGCGCGCGGCGCTCGGTTGGGCCGCGCTCGCCGCCGCTGTCCTCACGCTGACGGAGCGACTGCTTCCCGAAC GGGTGCGACACTGGGTGCCCTCGCCTCTGGGCATGGGCCTGGCCTGTCTGTTGCCGGCGTCCACGGCGCTGGGGTTCTTC CTGGGCGGGGTGGCGGCGGCCTTGGCCCGCAGGGCGAATCCAGGGGTGCAGGAGGGGCGGGTGGTGACGCTGGCCGCCGG CCTCATTGCAGGCGAAGGGTTGATGGGGGTTGTCATCGTCCTGAGCCAGGCGCTCTGGTAA
Upstream 100 bases:
>100_bases GTGGTGGCGAACGGGGAAGGGGGCTCGTCCCCGATGGCCTCGGAATGAAAAGATGGAACGGCCCATGTCTCAGCCCGTCC CCCAAGCTGCCTCCGAGGAA
Downstream 100 bases:
>100_bases CGTTCGTTTCACCCCATGCGCTGTCCGGTCTGCCACCGCCGTCTCGCCCTCGGCGCGGTGTGTCCTGTGCATGGCCAGCG CGCTTCGTCGCCTGGCCCTG
Product: OPT family oligopeptide transporter
Products: NA
Alternate protein names: Oligopeptide Transporter OPT Superfamily; Oligopeptide Transporter Opt Superfamily Protein; Oligopeptide Transporter OPT Family; OPT Superfamily Oligopeptide Transporter; Integral Membrane Protein; Oligopeptide Transporter Opt Family
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MTPAQAPLTLLRIPGDSPEALDTFWLREVFQGDRVPQLTLRAVLLGSGIGAITCATNLYAGLKMAVAFPVAITAALLAHT AHGAMRRVAPGVAGAPLSPLETCSAQAVASSAGYATGGALVSVQGAWLLTTGSHPPAWALLAWTFLLSALGVLFAVPLKR KLVDHEQLPFATGTAAAATIRALHTTGASSRPRLSMLGLGGGIAALVTLVRDGLGRLPYVFPFPGTLSGMSLERLGFGFE MSLLPLGAGALLGLRLTASWFLGALLIHGVVAPRVFASGLLLPDGDFLAWSLWPGTAALTTASLLHFALEGRVLGRALKG LFKRPSVAPHPVDALQVPGRWLLAGLVVLTPATLAVAKVGFGVPLPHAALAVALSFVLCLIACRVTGETDVTPVGPLGQV TQMTYGVLLPRNVEANLATAGITVNAASSAADLLSDAKTGHLLGAHPRRVFLAQLVGCAVGAAAVVPLFFLLVPDRSALG GERFPAPAATVTASIAQVLASGFSGLEPGTRAALGWAALAAAVLTLTERLLPERVRHWVPSPLGMGLACLLPASTALGFF LGGVAAALARRANPGVQEGRVVTLAAGLIAGEGLMGVVIVLSQALW
Sequences:
>Translated_606_residues MTPAQAPLTLLRIPGDSPEALDTFWLREVFQGDRVPQLTLRAVLLGSGIGAITCATNLYAGLKMAVAFPVAITAALLAHT AHGAMRRVAPGVAGAPLSPLETCSAQAVASSAGYATGGALVSVQGAWLLTTGSHPPAWALLAWTFLLSALGVLFAVPLKR KLVDHEQLPFATGTAAAATIRALHTTGASSRPRLSMLGLGGGIAALVTLVRDGLGRLPYVFPFPGTLSGMSLERLGFGFE MSLLPLGAGALLGLRLTASWFLGALLIHGVVAPRVFASGLLLPDGDFLAWSLWPGTAALTTASLLHFALEGRVLGRALKG LFKRPSVAPHPVDALQVPGRWLLAGLVVLTPATLAVAKVGFGVPLPHAALAVALSFVLCLIACRVTGETDVTPVGPLGQV TQMTYGVLLPRNVEANLATAGITVNAASSAADLLSDAKTGHLLGAHPRRVFLAQLVGCAVGAAAVVPLFFLLVPDRSALG GERFPAPAATVTASIAQVLASGFSGLEPGTRAALGWAALAAAVLTLTERLLPERVRHWVPSPLGMGLACLLPASTALGFF LGGVAAALARRANPGVQEGRVVTLAAGLIAGEGLMGVVIVLSQALW >Mature_605_residues TPAQAPLTLLRIPGDSPEALDTFWLREVFQGDRVPQLTLRAVLLGSGIGAITCATNLYAGLKMAVAFPVAITAALLAHTA HGAMRRVAPGVAGAPLSPLETCSAQAVASSAGYATGGALVSVQGAWLLTTGSHPPAWALLAWTFLLSALGVLFAVPLKRK LVDHEQLPFATGTAAAATIRALHTTGASSRPRLSMLGLGGGIAALVTLVRDGLGRLPYVFPFPGTLSGMSLERLGFGFEM SLLPLGAGALLGLRLTASWFLGALLIHGVVAPRVFASGLLLPDGDFLAWSLWPGTAALTTASLLHFALEGRVLGRALKGL FKRPSVAPHPVDALQVPGRWLLAGLVVLTPATLAVAKVGFGVPLPHAALAVALSFVLCLIACRVTGETDVTPVGPLGQVT QMTYGVLLPRNVEANLATAGITVNAASSAADLLSDAKTGHLLGAHPRRVFLAQLVGCAVGAAAVVPLFFLLVPDRSALGG ERFPAPAATVTASIAQVLASGFSGLEPGTRAALGWAALAAAVLTLTERLLPERVRHWVPSPLGMGLACLLPASTALGFFL GGVAAALARRANPGVQEGRVVTLAAGLIAGEGLMGVVIVLSQALW
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321324, Length=499, Percent_Identity=23.0460921843687, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61892; Mature: 61760
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAQAPLTLLRIPGDSPEALDTFWLREVFQGDRVPQLTLRAVLLGSGIGAITCATNLYA CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH GLKMAVAFPVAITAALLAHTAHGAMRRVAPGVAGAPLSPLETCSAQAVASSAGYATGGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE VSVQGAWLLTTGSHPPAWALLAWTFLLSALGVLFAVPLKRKLVDHEQLPFATGTAAAATI EEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH RALHTTGASSRPRLSMLGLGGGIAALVTLVRDGLGRLPYVFPFPGTLSGMSLERLGFGFE HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCCCE MSLLPLGAGALLGLRLTASWFLGALLIHGVVAPRVFASGLLLPDGDFLAWSLWPGTAALT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHH TASLLHFALEGRVLGRALKGLFKRPSVAPHPVDALQVPGRWLLAGLVVLTPATLAVAKVG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHC FGVPLPHAALAVALSFVLCLIACRVTGETDVTPVGPLGQVTQMTYGVLLPRNVEANLATA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCEEEC GITVNAASSAADLLSDAKTGHLLGAHPRRVFLAQLVGCAVGAAAVVPLFFLLVPDRSALG CEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC GERFPAPAATVTASIAQVLASGFSGLEPGTRAALGWAALAAAVLTLTERLLPERVRHWVP CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPLGMGLACLLPASTALGFFLGGVAAALARRANPGVQEGRVVTLAAGLIAGEGLMGVVIV CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCHHHHHHH LSQALW HHHHCC >Mature Secondary Structure TPAQAPLTLLRIPGDSPEALDTFWLREVFQGDRVPQLTLRAVLLGSGIGAITCATNLYA CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH GLKMAVAFPVAITAALLAHTAHGAMRRVAPGVAGAPLSPLETCSAQAVASSAGYATGGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE VSVQGAWLLTTGSHPPAWALLAWTFLLSALGVLFAVPLKRKLVDHEQLPFATGTAAAATI EEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH RALHTTGASSRPRLSMLGLGGGIAALVTLVRDGLGRLPYVFPFPGTLSGMSLERLGFGFE HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCCCE MSLLPLGAGALLGLRLTASWFLGALLIHGVVAPRVFASGLLLPDGDFLAWSLWPGTAALT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHH TASLLHFALEGRVLGRALKGLFKRPSVAPHPVDALQVPGRWLLAGLVVLTPATLAVAKVG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHC FGVPLPHAALAVALSFVLCLIACRVTGETDVTPVGPLGQVTQMTYGVLLPRNVEANLATA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCEEEC GITVNAASSAADLLSDAKTGHLLGAHPRRVFLAQLVGCAVGAAAVVPLFFLLVPDRSALG CEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC GERFPAPAATVTASIAQVLASGFSGLEPGTRAALGWAALAAAVLTLTERLLPERVRHWVP CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPLGMGLACLLPASTALGFFLGGVAAALARRANPGVQEGRVVTLAAGLIAGEGLMGVVIV CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCHHHHHHH LSQALW HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA