The gene/protein map for NC_008095 is currently unavailable.
Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 108763480

GI number: 108763480

Start: 4436567

End: 4437493

Strand: Direct

Name: ydjH [C]

Synonym: MXAN_3720

Alternate gene names: 108763480

Gene position: 4436567-4437493 (Clockwise)

Preceding gene: 108763156

Following gene: 108761692

Centisome position: 48.54

GC content: 67.85

Gene sequence:

>927_bases
ATGTCCCTGCTCGTCGTCGGCTCCGTTGCCCTGGACTCAGTGGAAACCCCCTTCGGCCAGAAGGAGGACATCCTCGGGGG
CTCGGCCACCTACTTCTCTACGTCGGCCTCGTTCTTCAGCCCCGCGCGTGTCGTGGCGGTGGTGGGCGAGGACTTCCCCG
AAGGGCACCTCAACTTCCTTCGCGGACGGGGAATCGACCTGGAGGGCCTCACCCGGGAGACGGGCCGCACCTTCCGCTGG
AAGGGCCGCTACAGCTACGAGCTGAACGAGGCGCAGACGCTGGACACCCAGCTCAACGTCTTCCAGGCCTTCTCCCCGAA
GCTGCCGGAGTCGTACCGGGATACGCCCTACGTCTTCCTGGGCAACATCCACCCGGAGCTCCAGGCGCAGGTGCTGGACC
AGGTGAAGGCGCCGAAGCTGGTGGCCGCCGACACCATGAACTTCTGGATCAAGGGCAGCCGGGCCGCGCTACTCAAGACG
CTCTCCCGCGTCAACCTCCTGTTCGTCAACGACGCGGAGGCCCGTCAGCTGGCCGGCGAGCACAACGTGGTGAAGGCCGC
TCGCGCCATCATGGCCATGGGCCCGCAGCGCGTGGTCATCAAGCGCGGTGAGTACGGCGCGCTCCTCTTCGAGGCCGAGC
ACATCTTCGCGTGCCCCGCCTTCCCCCTGGCCGAGGTCTTCGACCCCACCGGCGCGGGGGACACCTTCGCCGGCGGCTTC
ATGGGCGCCCTGGCCACCTCCAGTGGCGTGTTGGACCAGGCGCTGCTGCGCCGCGCCATGGTGATGGGCAGCGTCATGGC
CTCCTTCACGGTGGAGAAGTTCAGCCTGGAGCGCCTGCGCGAGGTGACGCGGCCGGAGATTCACGCCCGCTTCGCCGAGT
TCCGGAAGCTGACCCACTTCGACGACCTGGGCTCCCTGGAGCGATGA

Upstream 100 bases:

>100_bases
GGTGCTTGACGGAAAACGGGAAACGACGTACCCGGCACGGGCACGGGGCCCAGGGGAGCGCCGTGCCTGAGTTCACGGCA
TCTCCCCCCAGGAAGCTCGC

Downstream 100 bases:

>100_bases
GGCCGTGGGTAAGGGTGGGGCGCTCCACCACCCTTGAACTTGACTGTGGAATCAGGCCGTCCCTAGGCTGTGGATTCGGG
TGACGGAAGAAGGTTCCGGG

Product: PfkB family kinase

Products: NA

Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain-Containing Protein; PfkB Family Carbohydrate Kinase; Carbohydrate Kinase PfkB Family Protein; Pfkb Domain Protein; Carbohydrate/Pyrimidine Kinase PfkB Family; Ribokinase; ATP-Dependent 6-Phosphofructokinase; Carbohydrate Kinase PfkB Family; Ribokinase Family Sugar Kinase; Carbohydrate/Pyrimidine Kinase; PfkB Family Protein; Cytidine Kinase; Ribokinase Family; Ribokinase-Like Protein; Sugar Kinases Ribokinase Family; ATP-Dependent Phosphofructokinase; Kinase Pfkb Family; Carbohydrate Kinase PfkB/Ribokinase Family; PfkB Family Kinase; Carbohydrate/Purine Kinase; Kinase PfkB Family; Carbohydrate Kinase PfkB

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFLRGRGIDLEGLTRETGRTFRW
KGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFLGNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKT
LSRVNLLFVNDAEARQLAGEHNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF
MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHFDDLGSLER

Sequences:

>Translated_308_residues
MSLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFLRGRGIDLEGLTRETGRTFRW
KGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFLGNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKT
LSRVNLLFVNDAEARQLAGEHNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF
MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHFDDLGSLER
>Mature_307_residues
SLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFLRGRGIDLEGLTRETGRTFRWK
GRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFLGNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKTL
SRVNLLFVNDAEARQLAGEHNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGFM
GALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHFDDLGSLER

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081971, Length=139, Percent_Identity=30.2158273381295, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33932; Mature: 33801

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFL
CCEEEEEHHHHCCCCCCCCCCHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCHHHHH
RGRGIDLEGLTRETGRTFRWKGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFL
HCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
GNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKTLSRVNLLFVNDAEARQLAGE
CCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHCEEEEECCHHHHHHCCC
HNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEECCCCCHHHHCCCCCCCCCHHHHH
MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCH
DDLGSLER
HCCCCCCC
>Mature Secondary Structure 
SLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFL
CEEEEEHHHHCCCCCCCCCCHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCHHHHH
RGRGIDLEGLTRETGRTFRWKGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFL
HCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
GNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKTLSRVNLLFVNDAEARQLAGE
CCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHCEEEEECCHHHHHHCCC
HNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEECCCCCHHHHCCCCCCCCCHHHHH
MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCH
DDLGSLER
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA