| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ydjH [C]
Identifier: 108763480
GI number: 108763480
Start: 4436567
End: 4437493
Strand: Direct
Name: ydjH [C]
Synonym: MXAN_3720
Alternate gene names: 108763480
Gene position: 4436567-4437493 (Clockwise)
Preceding gene: 108763156
Following gene: 108761692
Centisome position: 48.54
GC content: 67.85
Gene sequence:
>927_bases ATGTCCCTGCTCGTCGTCGGCTCCGTTGCCCTGGACTCAGTGGAAACCCCCTTCGGCCAGAAGGAGGACATCCTCGGGGG CTCGGCCACCTACTTCTCTACGTCGGCCTCGTTCTTCAGCCCCGCGCGTGTCGTGGCGGTGGTGGGCGAGGACTTCCCCG AAGGGCACCTCAACTTCCTTCGCGGACGGGGAATCGACCTGGAGGGCCTCACCCGGGAGACGGGCCGCACCTTCCGCTGG AAGGGCCGCTACAGCTACGAGCTGAACGAGGCGCAGACGCTGGACACCCAGCTCAACGTCTTCCAGGCCTTCTCCCCGAA GCTGCCGGAGTCGTACCGGGATACGCCCTACGTCTTCCTGGGCAACATCCACCCGGAGCTCCAGGCGCAGGTGCTGGACC AGGTGAAGGCGCCGAAGCTGGTGGCCGCCGACACCATGAACTTCTGGATCAAGGGCAGCCGGGCCGCGCTACTCAAGACG CTCTCCCGCGTCAACCTCCTGTTCGTCAACGACGCGGAGGCCCGTCAGCTGGCCGGCGAGCACAACGTGGTGAAGGCCGC TCGCGCCATCATGGCCATGGGCCCGCAGCGCGTGGTCATCAAGCGCGGTGAGTACGGCGCGCTCCTCTTCGAGGCCGAGC ACATCTTCGCGTGCCCCGCCTTCCCCCTGGCCGAGGTCTTCGACCCCACCGGCGCGGGGGACACCTTCGCCGGCGGCTTC ATGGGCGCCCTGGCCACCTCCAGTGGCGTGTTGGACCAGGCGCTGCTGCGCCGCGCCATGGTGATGGGCAGCGTCATGGC CTCCTTCACGGTGGAGAAGTTCAGCCTGGAGCGCCTGCGCGAGGTGACGCGGCCGGAGATTCACGCCCGCTTCGCCGAGT TCCGGAAGCTGACCCACTTCGACGACCTGGGCTCCCTGGAGCGATGA
Upstream 100 bases:
>100_bases GGTGCTTGACGGAAAACGGGAAACGACGTACCCGGCACGGGCACGGGGCCCAGGGGAGCGCCGTGCCTGAGTTCACGGCA TCTCCCCCCAGGAAGCTCGC
Downstream 100 bases:
>100_bases GGCCGTGGGTAAGGGTGGGGCGCTCCACCACCCTTGAACTTGACTGTGGAATCAGGCCGTCCCTAGGCTGTGGATTCGGG TGACGGAAGAAGGTTCCGGG
Product: PfkB family kinase
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain-Containing Protein; PfkB Family Carbohydrate Kinase; Carbohydrate Kinase PfkB Family Protein; Pfkb Domain Protein; Carbohydrate/Pyrimidine Kinase PfkB Family; Ribokinase; ATP-Dependent 6-Phosphofructokinase; Carbohydrate Kinase PfkB Family; Ribokinase Family Sugar Kinase; Carbohydrate/Pyrimidine Kinase; PfkB Family Protein; Cytidine Kinase; Ribokinase Family; Ribokinase-Like Protein; Sugar Kinases Ribokinase Family; ATP-Dependent Phosphofructokinase; Kinase Pfkb Family; Carbohydrate Kinase PfkB/Ribokinase Family; PfkB Family Kinase; Carbohydrate/Purine Kinase; Kinase PfkB Family; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFLRGRGIDLEGLTRETGRTFRW KGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFLGNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKT LSRVNLLFVNDAEARQLAGEHNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHFDDLGSLER
Sequences:
>Translated_308_residues MSLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFLRGRGIDLEGLTRETGRTFRW KGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFLGNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKT LSRVNLLFVNDAEARQLAGEHNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHFDDLGSLER >Mature_307_residues SLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFLRGRGIDLEGLTRETGRTFRWK GRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFLGNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKTL SRVNLLFVNDAEARQLAGEHNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGFM GALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHFDDLGSLER
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081971, Length=139, Percent_Identity=30.2158273381295, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33932; Mature: 33801
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFL CCEEEEEHHHHCCCCCCCCCCHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCHHHHH RGRGIDLEGLTRETGRTFRWKGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFL HCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE GNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKTLSRVNLLFVNDAEARQLAGE CCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHCEEEEECCHHHHHHCCC HNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF HHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEECCCCCHHHHCCCCCCCCCHHHHH MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCH DDLGSLER HCCCCCCC >Mature Secondary Structure SLLVVGSVALDSVETPFGQKEDILGGSATYFSTSASFFSPARVVAVVGEDFPEGHLNFL CEEEEEHHHHCCCCCCCCCCHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCHHHHH RGRGIDLEGLTRETGRTFRWKGRYSYELNEAQTLDTQLNVFQAFSPKLPESYRDTPYVFL HCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE GNIHPELQAQVLDQVKAPKLVAADTMNFWIKGSRAALLKTLSRVNLLFVNDAEARQLAGE CCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHCEEEEECCHHHHHHCCC HNVVKAARAIMAMGPQRVVIKRGEYGALLFEAEHIFACPAFPLAEVFDPTGAGDTFAGGF HHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEECCCCCHHHHCCCCCCCCCHHHHH MGALATSSGVLDQALLRRAMVMGSVMASFTVEKFSLERLREVTRPEIHARFAEFRKLTHF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCH DDLGSLER HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA