| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ubiE [H]
Identifier: 108763479
GI number: 108763479
Start: 3560151
End: 3560960
Strand: Reverse
Name: ubiE [H]
Synonym: MXAN_3033
Alternate gene names: 108763479
Gene position: 3560960-3560151 (Counterclockwise)
Preceding gene: 108759515
Following gene: 108761868
Centisome position: 38.96
GC content: 70.12
Gene sequence:
>810_bases ATGTCGGCCGTATCGCCCCTAGCCCAACCCGAGGCCTGGAACCTGGTGGCGCCGGAGTACGTGCGCGAGCTGATGCCCAC CTTCGAGACGTTCTCCAGGGAGGCCCTGCTCCGGGCCGGCGTAGCGCAAGGGACGCGTGTCGTGGACGTCGCCACGGGGC CGGGCACGCTCGCGCTGCTCGCCGCGCGCGACGGCGCCCGCGTCACAGCAGTCGATTTCTCCCCGGAGATGATTGCCGCC CTGCGCGGCCGGACCGCGGAGGCGAAGCTCGACGTCGACATCCTGGAGGGTGACGGCATGGCGCTGCCCTTCGAGGCGAA CGCGTTCGACGCCGCCTTCTCCATGTTCGGCCTGATGTTCTTCCCGGACCGGGCACGTGGCTTCCAGGAGCTTCACCGGG TACTGAAGCCGGGCGGCCGGGCCGTCGTGTCCAGTTGGACGCCCTTTGAACGCTCGAAAGAGCTGCGCGCCGTGTACACG CGCCTCTGGGAGCAGATGGGCGCGAAGCCATCACAGCCGGGCGCCATCCCCCTGTCCGACCCCGACACCTGTCAGCGGGA GATGTCCAGCGCGGGCTTCACCCACGTCACGGTGAACGAAGTGGAAGGCTCCATCGACTACCCGTCCACAGCGGCCATGG TGGATGCCACCACCCGCTCCAGCGCGCCCGTCGTGCTGGCACGCAGGGCGCTGGGCCCGCAGTGGGAGCCGCTGCTCTGG TCCATGCACGAGTACGCGCAGGCGGAGCTGGGACCGGGGCCCCAGCGCGTCACCCTCACGGCCTACCTGACGACAGGCAC CAGGCCGTAG
Upstream 100 bases:
>100_bases GGGGGGCATGGATGTCGCAACAAGTTTGCGCCTTCAGGCCCCGCCATGCAGGCTTTCACGCGAACCGGGCCATGCCGAGC CCCCACGCCCAGGAGCCCCC
Downstream 100 bases:
>100_bases CGGACGGCCGCGTCGAGCGTGTTGCGCATCAGCATGGCGATGGTCATGGGCCCCACGCCACCGGGCACGGGGGTGATGAA TGACGCGCGCTCGGCGGCAG
Product: UbiE/COQ5 family methlytransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSAVSPLAQPEAWNLVAPEYVRELMPTFETFSREALLRAGVAQGTRVVDVATGPGTLALLAARDGARVTAVDFSPEMIAA LRGRTAEAKLDVDILEGDGMALPFEANAFDAAFSMFGLMFFPDRARGFQELHRVLKPGGRAVVSSWTPFERSKELRAVYT RLWEQMGAKPSQPGAIPLSDPDTCQREMSSAGFTHVTVNEVEGSIDYPSTAAMVDATTRSSAPVVLARRALGPQWEPLLW SMHEYAQAELGPGPQRVTLTAYLTTGTRP
Sequences:
>Translated_269_residues MSAVSPLAQPEAWNLVAPEYVRELMPTFETFSREALLRAGVAQGTRVVDVATGPGTLALLAARDGARVTAVDFSPEMIAA LRGRTAEAKLDVDILEGDGMALPFEANAFDAAFSMFGLMFFPDRARGFQELHRVLKPGGRAVVSSWTPFERSKELRAVYT RLWEQMGAKPSQPGAIPLSDPDTCQREMSSAGFTHVTVNEVEGSIDYPSTAAMVDATTRSSAPVVLARRALGPQWEPLLW SMHEYAQAELGPGPQRVTLTAYLTTGTRP >Mature_268_residues SAVSPLAQPEAWNLVAPEYVRELMPTFETFSREALLRAGVAQGTRVVDVATGPGTLALLAARDGARVTAVDFSPEMIAAL RGRTAEAKLDVDILEGDGMALPFEANAFDAAFSMFGLMFFPDRARGFQELHRVLKPGGRAVVSSWTPFERSKELRAVYTR LWEQMGAKPSQPGAIPLSDPDTCQREMSSAGFTHVTVNEVEGSIDYPSTAAMVDATTRSSAPVVLARRALGPQWEPLLWS MHEYAQAELGPGPQRVTLTAYLTTGTRP
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 29156; Mature: 29025
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVSPLAQPEAWNLVAPEYVRELMPTFETFSREALLRAGVAQGTRVVDVATGPGTLALL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE AARDGARVTAVDFSPEMIAALRGRTAEAKLDVDILEGDGMALPFEANAFDAAFSMFGLMF EECCCCEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHC FPDRARGFQELHRVLKPGGRAVVSSWTPFERSKELRAVYTRLWEQMGAKPSQPGAIPLSD CCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCC PDTCQREMSSAGFTHVTVNEVEGSIDYPSTAAMVDATTRSSAPVVLARRALGPQWEPLLW CHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHEEECCCCCCCCCEEEHHHCCCCCCHHHH SMHEYAQAELGPGPQRVTLTAYLTTGTRP HHHHHHHHHCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure SAVSPLAQPEAWNLVAPEYVRELMPTFETFSREALLRAGVAQGTRVVDVATGPGTLALL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE AARDGARVTAVDFSPEMIAALRGRTAEAKLDVDILEGDGMALPFEANAFDAAFSMFGLMF EECCCCEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHC FPDRARGFQELHRVLKPGGRAVVSSWTPFERSKELRAVYTRLWEQMGAKPSQPGAIPLSD CCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCC PDTCQREMSSAGFTHVTVNEVEGSIDYPSTAAMVDATTRSSAPVVLARRALGPQWEPLLW CHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHEEECCCCCCCCCEEEHHHCCCCCCHHHH SMHEYAQAELGPGPQRVTLTAYLTTGTRP HHHHHHHHHCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9515931 [H]