| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763460
Identifier: 108763460
GI number: 108763460
Start: 3812638
End: 3814158
Strand: Direct
Name: 108763460
Synonym: MXAN_3260
Alternate gene names: NA
Gene position: 3812638-3814158 (Clockwise)
Preceding gene: 108761845
Following gene: 108757807
Centisome position: 41.71
GC content: 70.41
Gene sequence:
>1521_bases GTGAGCGGAGGTTCCACGTCGGCCGCGTCCGGGGGCTCGTTCCTCGGGCGCGCCGGCCCCTTGGTGTTGGCCCGGCTGTT CACCGCCGGGCTGACGCTGTCCATTCCCCTCGTGCTCGCCCGGGTGCTGAACCTGGACGACTACGGGACGTACTACCAGC TGTTCCTCATCGCCACGACGCTCTACTACGTCCTGCCGTTCGGCGTGGTGCAGAGCCTCTACTACTTCCTGCCTCGCGCG GACGCGAAGCGGCCCTTCCTGGGGCAGACGCTGCTGTTCATGTCCGCCATGGGCCTGGTGGGCGCGGGAGCGGTGTGGGC GCTGCTCGGGTATGTGGCGGGCTGGTTCTCCAATCCCGCGCTGGCCGAGTACCGCCTGCCGCTGGCCGCGTACACCGCCT TTCTGCTGGGGAGCTTCCCGCTGGAGGTGTCCCTCACCTCGCAGGGCCGCACGAAGGCGTCCGCGGTCGTGTACCTGATA TCGGATGCGGTGCGGGCCTCGGTGATGGTGGTGCCGCCACTCCTGGGCGCCTCGCTCTACGGAATGATGATGGCGGTGGC GGCCTTCGCGGGCCTCCGCTACCTGGCGACGTGGGTGGTGTCGCTGCGCGGTGCCACCGGACCTTGGGTGGACGGCCAGC GCTTCCGCGAGCAACTGACCTACGCGGCGCCCTTCGGCGCGGCGATGCTCTTGGCCATTCCCCAGCAGAACGCGCACCTG TACGCGGTGGCGGGCGCGGTGGCGCCGGCGCTGTATGCGCTCTATCGCGTCGGCTGCTTCCAACTGCCGGTGGTGGACCT GCTGTACACGCCGACCAGCGAGGTGCTGATGGTGCGGCTGGGCGAACTGGAGCGCGAAGGCCGCCTGGAAGAGGGCGTGG AGGCCTTCCGTGAAGCGGCCGGAAAGCTGGCCTACTTCTTCCTGCCTTTCGCGGCGTTCCTCTTCTCGGCGGCGCCGGAG TTCATCGGGGCGATGTTCGGTGAGAAGTTCCTGCCCGCGGTGCCCGTCTTCCGCATCAGCGTGCTGGGCGTGGTGCTCTC CATCCTCCCCATGGACGGGACGCTGCGCGCCCGGGGGCAGACGCGGGCCATCTTCGCGTCCTATGCGGTGAAGGCGGCGG TGACGGTGCCGCTGGTGTGGCTGGGGGTGAAGCACTTCGGGCTGATGGGCGGCATCGGCTCGTGGGCGGTGGCGGAGGTG GTGGGCAAGGCCATGCTGCTGGCCCGCGTGCCCGCGGCGCTGTCCACGCCGGAGCGGAAGCTGGGCGTAGCGGACGTGAT TCCCTGGCAGTCGCTGGGCAAGGCCACGCTGGCGGCGTGCGCGGCGGCGGCGGCGGTGTTCGTCCTGCGGGCTGGTGCCC ACGGGGCCTGGGCGCACCTGCCCACGGGCTTTCTGTGGCGCGTGCTGCCTCTGGCGGTGGCCGGGGCACTGTTCTTCATC GGATACCTGGTGGTGCTGCACTTCACGGGGGTGCGACCGCTCAGCTTGATCGCGGGGCTGCGAGCGCGAAGGGCGGGGTA G
Upstream 100 bases:
>100_bases ACCAGTTGAGCAGCGCCCCGGTGCGGGTGGGCCCCAAGCCCGCGACCAGTAACGAAATCGTGGTGGGCCCAGAGTCCGCC ACGACCATCCAGGAGGCTCC
Downstream 100 bases:
>100_bases CGCACTTCCCTCCCTGCGGGGAGGTACCTAGTTTGGTGCGGTCGGAACAAGGGGATTGGGAGGCGTGATGGGTGTCGACG CGATGACGTTCTACCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSGGSTSAASGGSFLGRAGPLVLARLFTAGLTLSIPLVLARVLNLDDYGTYYQLFLIATTLYYVLPFGVVQSLYYFLPRA DAKRPFLGQTLLFMSAMGLVGAGAVWALLGYVAGWFSNPALAEYRLPLAAYTAFLLGSFPLEVSLTSQGRTKASAVVYLI SDAVRASVMVVPPLLGASLYGMMMAVAAFAGLRYLATWVVSLRGATGPWVDGQRFREQLTYAAPFGAAMLLAIPQQNAHL YAVAGAVAPALYALYRVGCFQLPVVDLLYTPTSEVLMVRLGELEREGRLEEGVEAFREAAGKLAYFFLPFAAFLFSAAPE FIGAMFGEKFLPAVPVFRISVLGVVLSILPMDGTLRARGQTRAIFASYAVKAAVTVPLVWLGVKHFGLMGGIGSWAVAEV VGKAMLLARVPAALSTPERKLGVADVIPWQSLGKATLAACAAAAAVFVLRAGAHGAWAHLPTGFLWRVLPLAVAGALFFI GYLVVLHFTGVRPLSLIAGLRARRAG
Sequences:
>Translated_506_residues MSGGSTSAASGGSFLGRAGPLVLARLFTAGLTLSIPLVLARVLNLDDYGTYYQLFLIATTLYYVLPFGVVQSLYYFLPRA DAKRPFLGQTLLFMSAMGLVGAGAVWALLGYVAGWFSNPALAEYRLPLAAYTAFLLGSFPLEVSLTSQGRTKASAVVYLI SDAVRASVMVVPPLLGASLYGMMMAVAAFAGLRYLATWVVSLRGATGPWVDGQRFREQLTYAAPFGAAMLLAIPQQNAHL YAVAGAVAPALYALYRVGCFQLPVVDLLYTPTSEVLMVRLGELEREGRLEEGVEAFREAAGKLAYFFLPFAAFLFSAAPE FIGAMFGEKFLPAVPVFRISVLGVVLSILPMDGTLRARGQTRAIFASYAVKAAVTVPLVWLGVKHFGLMGGIGSWAVAEV VGKAMLLARVPAALSTPERKLGVADVIPWQSLGKATLAACAAAAAVFVLRAGAHGAWAHLPTGFLWRVLPLAVAGALFFI GYLVVLHFTGVRPLSLIAGLRARRAG >Mature_505_residues SGGSTSAASGGSFLGRAGPLVLARLFTAGLTLSIPLVLARVLNLDDYGTYYQLFLIATTLYYVLPFGVVQSLYYFLPRAD AKRPFLGQTLLFMSAMGLVGAGAVWALLGYVAGWFSNPALAEYRLPLAAYTAFLLGSFPLEVSLTSQGRTKASAVVYLIS DAVRASVMVVPPLLGASLYGMMMAVAAFAGLRYLATWVVSLRGATGPWVDGQRFREQLTYAAPFGAAMLLAIPQQNAHLY AVAGAVAPALYALYRVGCFQLPVVDLLYTPTSEVLMVRLGELEREGRLEEGVEAFREAAGKLAYFFLPFAAFLFSAAPEF IGAMFGEKFLPAVPVFRISVLGVVLSILPMDGTLRARGQTRAIFASYAVKAAVTVPLVWLGVKHFGLMGGIGSWAVAEVV GKAMLLARVPAALSTPERKLGVADVIPWQSLGKATLAACAAAAAVFVLRAGAHGAWAHLPTGFLWRVLPLAVAGALFFIG YLVVLHFTGVRPLSLIAGLRARRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53717; Mature: 53586
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGSTSAASGGSFLGRAGPLVLARLFTAGLTLSIPLVLARVLNLDDYGTYYQLFLIATT CCCCCCCCCCCCCCHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LYYVLPFGVVQSLYYFLPRADAKRPFLGQTLLFMSAMGLVGAGAVWALLGYVAGWFSNPA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LAEYRLPLAAYTAFLLGSFPLEVSLTSQGRTKASAVVYLISDAVRASVMVVPPLLGASLY HHHHHCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHH GMMMAVAAFAGLRYLATWVVSLRGATGPWVDGQRFREQLTYAAPFGAAMLLAIPQQNAHL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHEHHEEECCCCCEE YAVAGAVAPALYALYRVGCFQLPVVDLLYTPTSEVLMVRLGELEREGRLEEGVEAFREAA EEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GKLAYFFLPFAAFLFSAAPEFIGAMFGEKFLPAVPVFRISVLGVVLSILPMDGTLRARGQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCC TRAIFASYAVKAAVTVPLVWLGVKHFGLMGGIGSWAVAEVVGKAMLLARVPAALSTPERK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHH LGVADVIPWQSLGKATLAACAAAAAVFVLRAGAHGAWAHLPTGFLWRVLPLAVAGALFFI CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH GYLVVLHFTGVRPLSLIAGLRARRAG HHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SGGSTSAASGGSFLGRAGPLVLARLFTAGLTLSIPLVLARVLNLDDYGTYYQLFLIATT CCCCCCCCCCCCCHHCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LYYVLPFGVVQSLYYFLPRADAKRPFLGQTLLFMSAMGLVGAGAVWALLGYVAGWFSNPA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LAEYRLPLAAYTAFLLGSFPLEVSLTSQGRTKASAVVYLISDAVRASVMVVPPLLGASLY HHHHHCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHHH GMMMAVAAFAGLRYLATWVVSLRGATGPWVDGQRFREQLTYAAPFGAAMLLAIPQQNAHL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHEHHEEECCCCCEE YAVAGAVAPALYALYRVGCFQLPVVDLLYTPTSEVLMVRLGELEREGRLEEGVEAFREAA EEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GKLAYFFLPFAAFLFSAAPEFIGAMFGEKFLPAVPVFRISVLGVVLSILPMDGTLRARGQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCC TRAIFASYAVKAAVTVPLVWLGVKHFGLMGGIGSWAVAEVVGKAMLLARVPAALSTPERK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHH LGVADVIPWQSLGKATLAACAAAAAVFVLRAGAHGAWAHLPTGFLWRVLPLAVAGALFFI CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH GYLVVLHFTGVRPLSLIAGLRARRAG HHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA