| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763453
Identifier: 108763453
GI number: 108763453
Start: 2031997
End: 2032935
Strand: Direct
Name: 108763453
Synonym: MXAN_1712
Alternate gene names: NA
Gene position: 2031997-2032935 (Clockwise)
Preceding gene: 108764077
Following gene: 108757286
Centisome position: 22.23
GC content: 71.25
Gene sequence:
>939_bases GTGAGCCAGGACGCCCTGACTTCCTTCTCCCCATTCCGGATGGAGCCTTCGAACACGGAGGGGCGGGACACGATGGCTCG ACCCTCGCGGACGGGCCGTCGGGATTTCCTGCGTGCGGCGGTGGCGCTCTCCGCGGGCGCGGTCCTGCTCCCCCCGGGGA CGGGCCGTGCGACGAAGCCTGTCGACAGCGCCGCGCTTCGGGCCCAGCGGTTGGCCTGGGCCGGCGTGCGGCTGCGGCTC GGACAGGACACGCTCTTCCTGGACCCGTTGAGCGACCCCACCGTGTGGGGGGCCGCGCTGAAGGACCCGCTTGTCCCAGT GGACGTGAGCGACGGGGGCCGCTTCGTCCTGGTGACGCATCGCCATTCCGACCACTTCGACCGGGTGGCCGTCCGTCAGG CGCTGGGGGACAGCGGGACGCTGGTGTGCGCCCCAGACATGGCCGCGGCGGCTTCGGCGTCGGGATTCCGCGTGCGGTCC GCCCCGCTCTACGAGCCCATCTTGCTCAATGACTTCACCGCCACCGCCGTTCCCGCGGCGGACGGCTATGGGGATCCCCA GGTTTCGTGGGTCGTCTCCGGTGGAGGCCGCCGCATCATCCACTGCGGCGACACGCTGTGGCATGGCTCCTGGTGGCACA TCGGGCGACAGTTCGGCCCCTTCGATGCGGCATTCCTGCCTATCAACGGGGCGCGCTTCGGCTGGCGCAAGCCCGTGAGC GACGTGCATGCCGTCCTGACGCCGGAGCAGGCGGTGGCCGCGGCCTTGGTGTTGGGAGCAAAGCTCCTCGTGCCCATCCA CTACGGCCTCGCTGCCTCGGAGGACTACCAGGAGGTCCCGGACGCGGAAGCGCTGCTTCTGGCCGCCGCGCGCACGCGGA AGGTGAACGTGGAGCTGGCACGTCCGGGGGAGTGGCTGACCTGGCGGGCCCGGACCTGA
Upstream 100 bases:
>100_bases GCTCATACCTGTTCTTCCCGCCGGCAAGCCGTCATCAGCCGCGGACCGAAACCGGCGTGCGCCTCTTCGGCATCAACCTC GTGGCCTCCCCGGGGGCTCG
Downstream 100 bases:
>100_bases CAGCGCGGCTCGAAGTGGGGAGCCATGGGCACTGCTCTGCCCCCATTCTTCGAGCCGCGCGCCTTCTCCCTACGACCGCG GGCCCATGGCCTTGCCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSQDALTSFSPFRMEPSNTEGRDTMARPSRTGRRDFLRAAVALSAGAVLLPPGTGRATKPVDSAALRAQRLAWAGVRLRL GQDTLFLDPLSDPTVWGAALKDPLVPVDVSDGGRFVLVTHRHSDHFDRVAVRQALGDSGTLVCAPDMAAAASASGFRVRS APLYEPILLNDFTATAVPAADGYGDPQVSWVVSGGGRRIIHCGDTLWHGSWWHIGRQFGPFDAAFLPINGARFGWRKPVS DVHAVLTPEQAVAAALVLGAKLLVPIHYGLAASEDYQEVPDAEALLLAAARTRKVNVELARPGEWLTWRART
Sequences:
>Translated_312_residues MSQDALTSFSPFRMEPSNTEGRDTMARPSRTGRRDFLRAAVALSAGAVLLPPGTGRATKPVDSAALRAQRLAWAGVRLRL GQDTLFLDPLSDPTVWGAALKDPLVPVDVSDGGRFVLVTHRHSDHFDRVAVRQALGDSGTLVCAPDMAAAASASGFRVRS APLYEPILLNDFTATAVPAADGYGDPQVSWVVSGGGRRIIHCGDTLWHGSWWHIGRQFGPFDAAFLPINGARFGWRKPVS DVHAVLTPEQAVAAALVLGAKLLVPIHYGLAASEDYQEVPDAEALLLAAARTRKVNVELARPGEWLTWRART >Mature_311_residues SQDALTSFSPFRMEPSNTEGRDTMARPSRTGRRDFLRAAVALSAGAVLLPPGTGRATKPVDSAALRAQRLAWAGVRLRLG QDTLFLDPLSDPTVWGAALKDPLVPVDVSDGGRFVLVTHRHSDHFDRVAVRQALGDSGTLVCAPDMAAAASASGFRVRSA PLYEPILLNDFTATAVPAADGYGDPQVSWVVSGGGRRIIHCGDTLWHGSWWHIGRQFGPFDAAFLPINGARFGWRKPVSD VHAVLTPEQAVAAALVLGAKLLVPIHYGLAASEDYQEVPDAEALLLAAARTRKVNVELARPGEWLTWRART
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33540; Mature: 33409
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDALTSFSPFRMEPSNTEGRDTMARPSRTGRRDFLRAAVALSAGAVLLPPGTGRATKP CCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC VDSAALRAQRLAWAGVRLRLGQDTLFLDPLSDPTVWGAALKDPLVPVDVSDGGRFVLVTH CHHHHHHHHHHHEECEEEEECCCEEEECCCCCCCEEHHHHCCCCEEEEECCCCEEEEEEE RHSDHFDRVAVRQALGDSGTLVCAPDMAAAASASGFRVRSAPLYEPILLNDFTATAVPAA CCCCCHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCC DGYGDPQVSWVVSGGGRRIIHCGDTLWHGSWWHIGRQFGPFDAAFLPINGARFGWRKPVS CCCCCCEEEEEEECCCEEEEEECCCEECCCHHHCCCCCCCCCEEEEECCCCCCCCCCCHH DVHAVLTPEQAVAAALVLGAKLLVPIHYGLAASEDYQEVPDAEALLLAAARTRKVNVELA HHHEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCCHHHHHEEHHCCEEEEEEEE RPGEWLTWRART CCCCEEEEEECC >Mature Secondary Structure SQDALTSFSPFRMEPSNTEGRDTMARPSRTGRRDFLRAAVALSAGAVLLPPGTGRATKP CCCCCCCCCCEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC VDSAALRAQRLAWAGVRLRLGQDTLFLDPLSDPTVWGAALKDPLVPVDVSDGGRFVLVTH CHHHHHHHHHHHEECEEEEECCCEEEECCCCCCCEEHHHHCCCCEEEEECCCCEEEEEEE RHSDHFDRVAVRQALGDSGTLVCAPDMAAAASASGFRVRSAPLYEPILLNDFTATAVPAA CCCCCHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCC DGYGDPQVSWVVSGGGRRIIHCGDTLWHGSWWHIGRQFGPFDAAFLPINGARFGWRKPVS CCCCCCEEEEEEECCCEEEEEECCCEECCCHHHCCCCCCCCCEEEEECCCCCCCCCCCHH DVHAVLTPEQAVAAALVLGAKLLVPIHYGLAASEDYQEVPDAEALLLAAARTRKVNVELA HHHEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCCHHHHHEEHHCCEEEEEEEE RPGEWLTWRART CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA