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The map label for this gene is ykuT [H]

Identifier: 108763381

GI number: 108763381

Start: 700496

End: 702193

Strand: Reverse

Name: ykuT [H]

Synonym: MXAN_0606

Alternate gene names: 108763381

Gene position: 702193-700496 (Counterclockwise)

Preceding gene: 108757379

Following gene: 108761308

Centisome position: 7.68

GC content: 64.96

Gene sequence:

>1698_bases
ATGATATGCAACCATTGCATGGAGATCTTCCGTCTCGCGGATACTGTTGAGTTGAATAACGCATGGCTTGTCGGCCTGAG
CGTGACACTGATGCTGCTCGCGCTCTGGGCCCTTCTGGTGGCCTCCAGTGCGCTGCTGTATCAGGGCATCCGGCTGGTGG
GCCTGAAGGTGCTGGAGCAGGCGGCAGACGCCCTTCGCAAGCGCGCCCGGCTGAGCGCCGCCCTCCTGTCCTTCGTGGTG
GTGGTCGCCGGCATCGCGGTGCTGGGCTTTTCCCTGTGGGCGAAGAAAGACCTGGCCCCCCACTTCAATGCCTTGCTTGG
GGGGGTGACAGCGGAAGGGCTGGCGGATGTGGGGCGCGGAGCAGGGCTGCTGGTGCTGTTGATGGCGGCCTTCCTGGCGC
TGGAACGCGCGGCGAGCCAGCTCCTGGTGCGGGTCGAACGCAGGTTGAACGAATGGCAGTTGCCCCCGGAGCACAGGGCA
CATGCCCAGAAGGCGATGGAGCAGGGGCCCGGCTTCATCAAGCTGCTGCTGGCCTACTTCGCGGTGGGCCTGGCGCTCGC
CTCGCTGCAACTCCCGGCCGTGCTCGACTGGCTCATTGGCACCACCCTCTTCGTGCTGCTGGCCATCAGCGGCGGGCGGC
TGGCGGTGTCCCTGCTGCACCTGGCGTCAGAGCGGCTGGTCGGGACCTGGGCGGCGAAGAGCACGGCCACGAAGTACGAG
GAGTACTTCCTGGCCCTCGGCCGGCTGCTCCCGGTGGGGCAGAAGAGCCTGGAGGCCATCGTCTACATCTCGGTGGCGAC
GCTCGTCATCCGCCGGTTCCAGGGCCTGGAGTTCTTTGCGCCCTACGGGCCGGTGCTCATCCGCGTCATCGCCCTGTTCT
TCGCCGCCAGCGTCGTCGTGGAGTTCGTCCGGCTGCTCATCGCGCGGGCATTCAAGGTGGACGGCTCCAACCTGGATGAC
GCGGCCCGGCGGCGCAACACCTTCGTCTCCCTCATCCAAAGCGCATCCAAGTACCTGGTCTACTTCCTGGTGGGGATGAT
GGTGCTCAGCGACCTTGGCGTGGACCCCACCCCCATCCTCGCTGGCGCCGGCATCGTCGGCCTCACCGTGGGTCTGGGCT
CGCAGGCCATCGTCACGGACATGGTCAACGGCGTCTTCCTGCTCTTCGAGGACCAGATACTGAACGGTGACTACATCCGC
ATCAACGATACAGAGGGCGTGGTGGAGGAGATAACGCCTCGCATCACCCGCATTCGCGACCGCTTCGGGCGCCTTCACAT
CCTCCGCAATGGCGAGGTCAAGAATGTCATCAACTACAGCCGCGGCTGGACGCTGGCCATCGTGGACATGGCCGTGGCCT
ACGAAAGCGACCTGAAGAAGGTGATGGATGTGATTCGCCAGGTGTGCGAGCAGGTGCCCATGCTGTCGCAGGGGAAGGTG
TCCGAAATCCCCAAGCTTCTGGGTATCGAGAGCATGGACGAGAGCTGGATGACCATGCGCATCGAAGCCAAGGTGCAGCC
AGGGACACACTTCGACGTGAAGCGGCTTCTCAACCGGCTGCTGATCGAGGCCTTCACCGCCAATGGCCTGGAATTCCCCT
ACCCCAAGGGGGTGGAATACGAGGGGGGCCCGTTGCTTCCCGCCACCTCCGAGGCACCGCAGGAGGAGCCCCAGGCGCTC
GCCGCCTCACACCGGTAA

Upstream 100 bases:

>100_bases
CGGCCCTTCAGCGGAACGGCCGGGGCGTTGCCTCACCGCGCCCCACTCGCATGAGCCGCCCCTGACGGAAGCGCAGATCC
GCGAGAACGCGCCGTTTTGC

Downstream 100 bases:

>100_bases
CGATAGAGGTGCCTCCCCAGGATTCGAGTTGCTTCGTCTTCAGCTGCAATCCCTCTCACCCCATGGAGTCCGTCCCATGA
AGAAGGCTTTCCTCATCGCC

Product: small conductance mechanosensitive ion channel (MscS) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MICNHCMEIFRLADTVELNNAWLVGLSVTLMLLALWALLVASSALLYQGIRLVGLKVLEQAADALRKRARLSAALLSFVV
VVAGIAVLGFSLWAKKDLAPHFNALLGGVTAEGLADVGRGAGLLVLLMAAFLALERAASQLLVRVERRLNEWQLPPEHRA
HAQKAMEQGPGFIKLLLAYFAVGLALASLQLPAVLDWLIGTTLFVLLAISGGRLAVSLLHLASERLVGTWAAKSTATKYE
EYFLALGRLLPVGQKSLEAIVYISVATLVIRRFQGLEFFAPYGPVLIRVIALFFAASVVVEFVRLLIARAFKVDGSNLDD
AARRRNTFVSLIQSASKYLVYFLVGMMVLSDLGVDPTPILAGAGIVGLTVGLGSQAIVTDMVNGVFLLFEDQILNGDYIR
INDTEGVVEEITPRITRIRDRFGRLHILRNGEVKNVINYSRGWTLAIVDMAVAYESDLKKVMDVIRQVCEQVPMLSQGKV
SEIPKLLGIESMDESWMTMRIEAKVQPGTHFDVKRLLNRLLIEAFTANGLEFPYPKGVEYEGGPLLPATSEAPQEEPQAL
AASHR

Sequences:

>Translated_565_residues
MICNHCMEIFRLADTVELNNAWLVGLSVTLMLLALWALLVASSALLYQGIRLVGLKVLEQAADALRKRARLSAALLSFVV
VVAGIAVLGFSLWAKKDLAPHFNALLGGVTAEGLADVGRGAGLLVLLMAAFLALERAASQLLVRVERRLNEWQLPPEHRA
HAQKAMEQGPGFIKLLLAYFAVGLALASLQLPAVLDWLIGTTLFVLLAISGGRLAVSLLHLASERLVGTWAAKSTATKYE
EYFLALGRLLPVGQKSLEAIVYISVATLVIRRFQGLEFFAPYGPVLIRVIALFFAASVVVEFVRLLIARAFKVDGSNLDD
AARRRNTFVSLIQSASKYLVYFLVGMMVLSDLGVDPTPILAGAGIVGLTVGLGSQAIVTDMVNGVFLLFEDQILNGDYIR
INDTEGVVEEITPRITRIRDRFGRLHILRNGEVKNVINYSRGWTLAIVDMAVAYESDLKKVMDVIRQVCEQVPMLSQGKV
SEIPKLLGIESMDESWMTMRIEAKVQPGTHFDVKRLLNRLLIEAFTANGLEFPYPKGVEYEGGPLLPATSEAPQEEPQAL
AASHR
>Mature_565_residues
MICNHCMEIFRLADTVELNNAWLVGLSVTLMLLALWALLVASSALLYQGIRLVGLKVLEQAADALRKRARLSAALLSFVV
VVAGIAVLGFSLWAKKDLAPHFNALLGGVTAEGLADVGRGAGLLVLLMAAFLALERAASQLLVRVERRLNEWQLPPEHRA
HAQKAMEQGPGFIKLLLAYFAVGLALASLQLPAVLDWLIGTTLFVLLAISGGRLAVSLLHLASERLVGTWAAKSTATKYE
EYFLALGRLLPVGQKSLEAIVYISVATLVIRRFQGLEFFAPYGPVLIRVIALFFAASVVVEFVRLLIARAFKVDGSNLDD
AARRRNTFVSLIQSASKYLVYFLVGMMVLSDLGVDPTPILAGAGIVGLTVGLGSQAIVTDMVNGVFLLFEDQILNGDYIR
INDTEGVVEEITPRITRIRDRFGRLHILRNGEVKNVINYSRGWTLAIVDMAVAYESDLKKVMDVIRQVCEQVPMLSQGKV
SEIPKLLGIESMDESWMTMRIEAKVQPGTHFDVKRLLNRLLIEAFTANGLEFPYPKGVEYEGGPLLPATSEAPQEEPQAL
AASHR

Specific function: May play a role in resistance to osmotic downshock [H]

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=347, Percent_Identity=26.8011527377522, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 61796; Mature: 61796

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00358 RIBOSOMAL_L5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICNHCMEIFRLADTVELNNAWLVGLSVTLMLLALWALLVASSALLYQGIRLVGLKVLEQ
CCHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADALRKRARLSAALLSFVVVVAGIAVLGFSLWAKKDLAPHFNALLGGVTAEGLADVGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC
AGLLVLLMAAFLALERAASQLLVRVERRLNEWQLPPEHRAHAQKAMEQGPGFIKLLLAYF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
AVGLALASLQLPAVLDWLIGTTLFVLLAISGGRLAVSLLHLASERLVGTWAAKSTATKYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYFLALGRLLPVGQKSLEAIVYISVATLVIRRFQGLEFFAPYGPVLIRVIALFFAASVVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EFVRLLIARAFKVDGSNLDDAARRRNTFVSLIQSASKYLVYFLVGMMVLSDLGVDPTPIL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AGAGIVGLTVGLGSQAIVTDMVNGVFLLFEDQILNGDYIRINDTEGVVEEITPRITRIRD
HCCCHHHHEECCCCHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHH
RFGRLHILRNGEVKNVINYSRGWTLAIVDMAVAYESDLKKVMDVIRQVCEQVPMLSQGKV
HHCCEEEEECCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SEIPKLLGIESMDESWMTMRIEAKVQPGTHFDVKRLLNRLLIEAFTANGLEFPYPKGVEY
HHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EGGPLLPATSEAPQEEPQALAASHR
CCCCCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MICNHCMEIFRLADTVELNNAWLVGLSVTLMLLALWALLVASSALLYQGIRLVGLKVLEQ
CCHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AADALRKRARLSAALLSFVVVVAGIAVLGFSLWAKKDLAPHFNALLGGVTAEGLADVGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC
AGLLVLLMAAFLALERAASQLLVRVERRLNEWQLPPEHRAHAQKAMEQGPGFIKLLLAYF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
AVGLALASLQLPAVLDWLIGTTLFVLLAISGGRLAVSLLHLASERLVGTWAAKSTATKYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYFLALGRLLPVGQKSLEAIVYISVATLVIRRFQGLEFFAPYGPVLIRVIALFFAASVVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EFVRLLIARAFKVDGSNLDDAARRRNTFVSLIQSASKYLVYFLVGMMVLSDLGVDPTPIL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AGAGIVGLTVGLGSQAIVTDMVNGVFLLFEDQILNGDYIRINDTEGVVEEITPRITRIRD
HCCCHHHHEECCCCHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHH
RFGRLHILRNGEVKNVINYSRGWTLAIVDMAVAYESDLKKVMDVIRQVCEQVPMLSQGKV
HHCCEEEEECCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SEIPKLLGIESMDESWMTMRIEAKVQPGTHFDVKRLLNRLLIEAFTANGLEFPYPKGVEY
HHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EGGPLLPATSEAPQEEPQALAASHR
CCCCCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]