| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is birA [H]
Identifier: 108763373
GI number: 108763373
Start: 5100003
End: 5101007
Strand: Reverse
Name: birA [H]
Synonym: MXAN_4152
Alternate gene names: 108763373
Gene position: 5101007-5100003 (Counterclockwise)
Preceding gene: 108757466
Following gene: 108763851
Centisome position: 55.81
GC content: 70.95
Gene sequence:
>1005_bases GTGGCCGCCAATGCGAACGAGCAGACCCAGGAAGAGCTCATCCTGAGCTTCCTGTCGGAAAGCGGGGGCGATTACACCTC CGGTGAGGCGCTCTCCAGCAAGCTGGGCCTGTCGCGCACGGCGGTGTGGAAGCACGTGGAGGCCCTGCGCGCGAAGGGGT ACCGCATCGAGGCGGTGTCCGCGCGAGGCTACCGGCTGGTGGCGGTGCCGGACCGGCTCACCTCGCTCGAGGTGGGCCCG CTGCTGGACACCCGCGACCTGGGCCGCACCATCCACCATCACGAATCGCTGCCTTCCACCAACGAGAAGGCCTTCCGCCT GGCCCAGGACGGCGCCAGGCACGGTGAGGTCGTGGTGGCCGAGCAGCAGACCGCGGGCAAGGGGCGCCGGGGCCGCACTT GGGTGTCTCCGCCGGGCCTCAATCTCTACTTCTCCGCCATCCTCCGTCCCGGCCTGCCGCCCCAGCGCGCGCCGGAGCTG ACGTTGGTGGCGGCCGTGGCGCTGGCGGAGTCGCTGCGCGACGCGGGCGTGGAGGCCGCCATCAAGTGGCCCAACGACGT CCACATCGACGGCCTCAAGGTCGCGGGAATCCTCACCGAGCTGTCCGCCGAACCCGAGCGCGTGCACTTCGTCATCGTGG GCGTGGGGGTCAATCTCAACTCCCAGGTCGAACACTTTCCGGAGGAGCTGCGGGCCACCGCCACGTCGTTGTCGCTGGCC CTGGGGCAGCCGGTACACCGGGCTCGCTTCGCTGCGTCGCTCTGGACGCGGCTGGAGGAGTGGTTGGACCTCTACCTGGA CACGGGCTTCGACGCGGTGCGTGCCCGCTGGAAGGCGCTGTCCTCCACTCTGGGGCAGGACGTGCTGGTGCGCACCGACC GGCACGAGCTGCGGGGGCGGGCCGAGGACATCGACCCATCCGGGGCGCTGCTGGTCCGGACGGCGGAGGGCTCGCTCGAA CGTGTGTTGGCGGGCGACGTGGAGCAGCTGCGCCCACGGCGGTAG
Upstream 100 bases:
>100_bases GATGCCGCAGACCTCCCTGGAGCTGACGGCCTGGCAGCTTCGGGACGGCGCGGCGCCGCCTTCGGGCTGATACGGTGGAG ACTCTCCACGAGGTGCCGCT
Downstream 100 bases:
>100_bases AGTGCGCGGTGTCATGCTCCTGGCCATCGACGTCGGCAACACCAATACCGTGCTCGGAGTGTTCGAGGGCCGGCGCCTGC TCGACCACTGGCGCGTAGAG
Product: BirA bifunctional protein
Products: NA
Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAANANEQTQEELILSFLSESGGDYTSGEALSSKLGLSRTAVWKHVEALRAKGYRIEAVSARGYRLVAVPDRLTSLEVGP LLDTRDLGRTIHHHESLPSTNEKAFRLAQDGARHGEVVVAEQQTAGKGRRGRTWVSPPGLNLYFSAILRPGLPPQRAPEL TLVAAVALAESLRDAGVEAAIKWPNDVHIDGLKVAGILTELSAEPERVHFVIVGVGVNLNSQVEHFPEELRATATSLSLA LGQPVHRARFAASLWTRLEEWLDLYLDTGFDAVRARWKALSSTLGQDVLVRTDRHELRGRAEDIDPSGALLVRTAEGSLE RVLAGDVEQLRPRR
Sequences:
>Translated_334_residues MAANANEQTQEELILSFLSESGGDYTSGEALSSKLGLSRTAVWKHVEALRAKGYRIEAVSARGYRLVAVPDRLTSLEVGP LLDTRDLGRTIHHHESLPSTNEKAFRLAQDGARHGEVVVAEQQTAGKGRRGRTWVSPPGLNLYFSAILRPGLPPQRAPEL TLVAAVALAESLRDAGVEAAIKWPNDVHIDGLKVAGILTELSAEPERVHFVIVGVGVNLNSQVEHFPEELRATATSLSLA LGQPVHRARFAASLWTRLEEWLDLYLDTGFDAVRARWKALSSTLGQDVLVRTDRHELRGRAEDIDPSGALLVRTAEGSLE RVLAGDVEQLRPRR >Mature_333_residues AANANEQTQEELILSFLSESGGDYTSGEALSSKLGLSRTAVWKHVEALRAKGYRIEAVSARGYRLVAVPDRLTSLEVGPL LDTRDLGRTIHHHESLPSTNEKAFRLAQDGARHGEVVVAEQQTAGKGRRGRTWVSPPGLNLYFSAILRPGLPPQRAPELT LVAAVALAESLRDAGVEAAIKWPNDVHIDGLKVAGILTELSAEPERVHFVIVGVGVNLNSQVEHFPEELRATATSLSLAL GQPVHRARFAASLWTRLEEWLDLYLDTGFDAVRARWKALSSTLGQDVLVRTDRHELRGRAEDIDPSGALLVRTAEGSLER VLAGDVEQLRPRR
Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biotin--protein ligase family [H]
Homologues:
Organism=Homo sapiens, GI46255045, Length=205, Percent_Identity=29.7560975609756, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI1790408, Length=309, Percent_Identity=31.7152103559871, Blast_Score=140, Evalue=2e-34, Organism=Drosophila melanogaster, GI24644246, Length=269, Percent_Identity=26.0223048327138, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =6.3.4.15 [H]
Molecular weight: Translated: 36523; Mature: 36392
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANANEQTQEELILSFLSESGGDYTSGEALSSKLGLSRTAVWKHVEALRAKGYRIEAVS CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEC ARGYRLVAVPDRLTSLEVGPLLDTRDLGRTIHHHESLPSTNEKAFRLAQDGARHGEVVVA CCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE EQQTAGKGRRGRTWVSPPGLNLYFSAILRPGLPPQRAPELTLVAAVALAESLRDAGVEAA ECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE IKWPNDVHIDGLKVAGILTELSAEPERVHFVIVGVGVNLNSQVEHFPEELRATATSLSLA EECCCCEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LGQPVHRARFAASLWTRLEEWLDLYLDTGFDAVRARWKALSSTLGQDVLVRTDRHELRGR HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEECCHHHHCCC AEDIDPSGALLVRTAEGSLERVLAGDVEQLRPRR CCCCCCCCEEEEEECCCCHHHHHHCCHHHHCCCC >Mature Secondary Structure AANANEQTQEELILSFLSESGGDYTSGEALSSKLGLSRTAVWKHVEALRAKGYRIEAVS CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEC ARGYRLVAVPDRLTSLEVGPLLDTRDLGRTIHHHESLPSTNEKAFRLAQDGARHGEVVVA CCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE EQQTAGKGRRGRTWVSPPGLNLYFSAILRPGLPPQRAPELTLVAAVALAESLRDAGVEAA ECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE IKWPNDVHIDGLKVAGILTELSAEPERVHFVIVGVGVNLNSQVEHFPEELRATATSLSLA EECCCCEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LGQPVHRARFAASLWTRLEEWLDLYLDTGFDAVRARWKALSSTLGQDVLVRTDRHELRGR HCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEECCHHHHCCC AEDIDPSGALLVRTAEGSLERVLAGDVEQLRPRR CCCCCCCCEEEEEECCCCHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7730294 [H]