| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yusP [H]
Identifier: 108763363
GI number: 108763363
Start: 119698
End: 121449
Strand: Reverse
Name: yusP [H]
Synonym: MXAN_0105
Alternate gene names: 108763363
Gene position: 121449-119698 (Counterclockwise)
Preceding gene: 108759547
Following gene: 108759484
Centisome position: 1.33
GC content: 72.2
Gene sequence:
>1752_bases ATGGCCCCGTCCGCCGCTCCCGCCACCGCCAATGCGCCGCCCGCCTTCCCGGCGTTCACGCGCTCCCAGAAGGTCTTCAC GCTGCTGGGCGCGGTGCTGGGGCTCTTGCTCGCCGCGCTGGACCAGACGATTGTCGCCACCGCGGGGCCGGCCATCCAGG CGGACCTGCGAATCCCCGCCTCGCTCTACCCGTGGCTCACCACGTCGTACTTCGTCGCGTCGACGACGATGGTGCCCGTG TGGGGCAAGCTGTCGGACCTGCTGGGCCGGCGCGCGGTGTTGGCCGCGGGCATCCTCATCTTCCTCGCGGGCAGCTTCCT GTGCGGGGTGGCGCGCTCCACGGTGGCGCTCATCCTCTTCCGCGCCGTGCAGGGGCTGGGCAGCGCGGCGCTGTTCACCG CCGCGCTGGCGGTGGTGGCCGACCTCTTCGAGCCCCGTGAGCGCGGCAAGTACCAGGGCCTCTTCGGCGCCATGTTCGGC CTGTCCAGCGTGGTGGGGCCGCTGGCCGGTGGGTTCATCACCGACCACCTGGGCTGGCACTGGGTGTTCTTCATCAACCT GCCCGTGGGCGCGGTGGCGCTGGCGCTGGTGCTGTCGCGCATGCCGCGGCTGAAGCCCCAGCGTGTTTCCCGGGGCGGGC TGGACCTGGTGGGAGCGTTCACGCTCGCGGTGGCGCTGGTGCCGCTGCTGCTGGCGCTCAGCCTGGGGCAGACGGACGGC GGCGACTGGGCCTGGACGTCGTGGCGCATCCTGGGACTGTTCGCGCTGTCGGCGGTGGGCCTGGTGGCCTTCCTCTGGGC GGAGCGGCGCGCGCCCGAGCCCCTGCTCGACCTGACGCTGTTCCGCCTGCGTGCCTTCAGCGCGGGCAACGCGGCGGTGT TCATCGTCGGCGGGGCGTTCCTGTCGGGCATCGTCTTCCTGCCGCTGTTCATGGTGAACGTGGTGGGGCTGTCGGCGACG CGCTCGGGGCTGACGGTCATGCCGCTGACGCTGGGCGTGGTGGCGGGGAACGTGCTGAGCGGGCAGCTCGTGTCCAGGGT GGGCCGCTACAAGGCGCTGCTGCTGGGCTCGCTGGTGCTGCTGATGGCGGGCTTCGCCGTCATGGCCTTCACGCTGACGC CGGACTCCACCCAGGCGGAGGTGACGGCGAAGATGGTGCTGGTGGGCCTGGGCCTGGGGCCTTCGATTCCGCTCTACACG ATGGCCATCCAGAACGCGGTGCCACCGGACCAGATTGGCGTGGGCACCGCGGCGGCCACGTTCTTCCGGCAGCTGGGCAT GACGTTGGGCGTGGCGCTGCTGGGGACGGTGTTCGCGTCCACGCTGTCCTCGGAGCTGGAGGCGCGCATGGCGCAGGCCA CGTCGGCGCTCCCGGACTCCGTGAAGGCCGAGGTGACACGCGCCGCGCCGGGCGTCAGTGGCGAAGGCGGTCCCACCGGA CAGGTGTTCCGCGCGGATGAGGTGAAGGCGCGGGTGCGCGCGGAGTTCGACGCCGAGCGGCGCCGTGCGGAGACAACGGC CGCTCCCGAGGCCCGGGCGAAGGTGGACGCGGACGAGAGACAGGCACTGGCAGCGGTGGACGCGGCGGACCGGGCGCTGA AGATGGCGTTCACTCGCGGCGTCTCCGCCGTGTACCACGTGGCCCTGTTCATCGCCGGCGCGGCGCTGCTGGTGACACTG TTCCTTCCGGAGCAGCACCTGCGCCGCAAGCGCCGGCGCATCGAGTCGCGTGCCAGCGCCCCGGAGCAGTAG
Upstream 100 bases:
>100_bases GGAAACAGCTGGTGCCGCAAAGGGACTCTGCCGGTGGCCGTCTGGTAGGAACGTCCCCACCTTTCCCCTGGCGCCCCTGA CCCGGGAGCCACCGCGACAC
Downstream 100 bases:
>100_bases CGTCGCGGCATGGCTCACGACGCGGAACAGTCACCCGCGCTCACGGACGCGGAGGCCGCCGAGCGCATCCACGCGCGCTT TCCCGCGCTCGCGACGGCGC
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MAPSAAPATANAPPAFPAFTRSQKVFTLLGAVLGLLLAALDQTIVATAGPAIQADLRIPASLYPWLTTSYFVASTTMVPV WGKLSDLLGRRAVLAAGILIFLAGSFLCGVARSTVALILFRAVQGLGSAALFTAALAVVADLFEPRERGKYQGLFGAMFG LSSVVGPLAGGFITDHLGWHWVFFINLPVGAVALALVLSRMPRLKPQRVSRGGLDLVGAFTLAVALVPLLLALSLGQTDG GDWAWTSWRILGLFALSAVGLVAFLWAERRAPEPLLDLTLFRLRAFSAGNAAVFIVGGAFLSGIVFLPLFMVNVVGLSAT RSGLTVMPLTLGVVAGNVLSGQLVSRVGRYKALLLGSLVLLMAGFAVMAFTLTPDSTQAEVTAKMVLVGLGLGPSIPLYT MAIQNAVPPDQIGVGTAAATFFRQLGMTLGVALLGTVFASTLSSELEARMAQATSALPDSVKAEVTRAAPGVSGEGGPTG QVFRADEVKARVRAEFDAERRRAETTAAPEARAKVDADERQALAAVDAADRALKMAFTRGVSAVYHVALFIAGAALLVTL FLPEQHLRRKRRRIESRASAPEQ
Sequences:
>Translated_583_residues MAPSAAPATANAPPAFPAFTRSQKVFTLLGAVLGLLLAALDQTIVATAGPAIQADLRIPASLYPWLTTSYFVASTTMVPV WGKLSDLLGRRAVLAAGILIFLAGSFLCGVARSTVALILFRAVQGLGSAALFTAALAVVADLFEPRERGKYQGLFGAMFG LSSVVGPLAGGFITDHLGWHWVFFINLPVGAVALALVLSRMPRLKPQRVSRGGLDLVGAFTLAVALVPLLLALSLGQTDG GDWAWTSWRILGLFALSAVGLVAFLWAERRAPEPLLDLTLFRLRAFSAGNAAVFIVGGAFLSGIVFLPLFMVNVVGLSAT RSGLTVMPLTLGVVAGNVLSGQLVSRVGRYKALLLGSLVLLMAGFAVMAFTLTPDSTQAEVTAKMVLVGLGLGPSIPLYT MAIQNAVPPDQIGVGTAAATFFRQLGMTLGVALLGTVFASTLSSELEARMAQATSALPDSVKAEVTRAAPGVSGEGGPTG QVFRADEVKARVRAEFDAERRRAETTAAPEARAKVDADERQALAAVDAADRALKMAFTRGVSAVYHVALFIAGAALLVTL FLPEQHLRRKRRRIESRASAPEQ >Mature_582_residues APSAAPATANAPPAFPAFTRSQKVFTLLGAVLGLLLAALDQTIVATAGPAIQADLRIPASLYPWLTTSYFVASTTMVPVW GKLSDLLGRRAVLAAGILIFLAGSFLCGVARSTVALILFRAVQGLGSAALFTAALAVVADLFEPRERGKYQGLFGAMFGL SSVVGPLAGGFITDHLGWHWVFFINLPVGAVALALVLSRMPRLKPQRVSRGGLDLVGAFTLAVALVPLLLALSLGQTDGG DWAWTSWRILGLFALSAVGLVAFLWAERRAPEPLLDLTLFRLRAFSAGNAAVFIVGGAFLSGIVFLPLFMVNVVGLSATR SGLTVMPLTLGVVAGNVLSGQLVSRVGRYKALLLGSLVLLMAGFAVMAFTLTPDSTQAEVTAKMVLVGLGLGPSIPLYTM AIQNAVPPDQIGVGTAAATFFRQLGMTLGVALLGTVFASTLSSELEARMAQATSALPDSVKAEVTRAAPGVSGEGGPTGQ VFRADEVKARVRAEFDAERRRAETTAAPEARAKVDADERQALAAVDAADRALKMAFTRGVSAVYHVALFIAGAALLVTLF LPEQHLRRKRRRIESRASAPEQ
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=447, Percent_Identity=25.0559284116331, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI87081983, Length=413, Percent_Identity=28.5714285714286, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1790195, Length=411, Percent_Identity=28.2238442822384, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788710, Length=475, Percent_Identity=24.8421052631579, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1788392, Length=325, Percent_Identity=32, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI87081738, Length=155, Percent_Identity=30.9677419354839, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322958, Length=466, Percent_Identity=27.0386266094421, Blast_Score=124, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6319770, Length=464, Percent_Identity=26.9396551724138, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323735, Length=479, Percent_Identity=25.0521920668058, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319783, Length=382, Percent_Identity=24.869109947644, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6325455, Length=230, Percent_Identity=26.5217391304348, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321663, Length=463, Percent_Identity=21.3822894168467, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324954, Length=396, Percent_Identity=23.4848484848485, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323520, Length=382, Percent_Identity=22.5130890052356, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 61072; Mature: 60941
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSAAPATANAPPAFPAFTRSQKVFTLLGAVLGLLLAALDQTIVATAGPAIQADLRIPA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC SLYPWLTTSYFVASTTMVPVWGKLSDLLGRRAVLAAGILIFLAGSFLCGVARSTVALILF HHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVQGLGSAALFTAALAVVADLFEPRERGKYQGLFGAMFGLSSVVGPLAGGFITDHLGWH HHHHCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCE WVFFINLPVGAVALALVLSRMPRLKPQRVSRGGLDLVGAFTLAVALVPLLLALSLGQTDG EEEEEECCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC GDWAWTSWRILGLFALSAVGLVAFLWAERRAPEPLLDLTLFRLRAFSAGNAAVFIVGGAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHH LSGIVFLPLFMVNVVGLSATRSGLTVMPLTLGVVAGNVLSGQLVSRVGRYKALLLGSLVL HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMAGFAVMAFTLTPDSTQAEVTAKMVLVGLGLGPSIPLYTMAIQNAVPPDQIGVGTAAAT HHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHH FFRQLGMTLGVALLGTVFASTLSSELEARMAQATSALPDSVKAEVTRAAPGVSGEGGPTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC QVFRADEVKARVRAEFDAERRRAETTAAPEARAKVDADERQALAAVDAADRALKMAFTRG CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VSAVYHVALFIAGAALLVTLFLPEQHLRRKRRRIESRASAPEQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure APSAAPATANAPPAFPAFTRSQKVFTLLGAVLGLLLAALDQTIVATAGPAIQADLRIPA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC SLYPWLTTSYFVASTTMVPVWGKLSDLLGRRAVLAAGILIFLAGSFLCGVARSTVALILF HHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVQGLGSAALFTAALAVVADLFEPRERGKYQGLFGAMFGLSSVVGPLAGGFITDHLGWH HHHHCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCE WVFFINLPVGAVALALVLSRMPRLKPQRVSRGGLDLVGAFTLAVALVPLLLALSLGQTDG EEEEEECCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC GDWAWTSWRILGLFALSAVGLVAFLWAERRAPEPLLDLTLFRLRAFSAGNAAVFIVGGAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHH LSGIVFLPLFMVNVVGLSATRSGLTVMPLTLGVVAGNVLSGQLVSRVGRYKALLLGSLVL HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMAGFAVMAFTLTPDSTQAEVTAKMVLVGLGLGPSIPLYTMAIQNAVPPDQIGVGTAAAT HHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHH FFRQLGMTLGVALLGTVFASTLSSELEARMAQATSALPDSVKAEVTRAAPGVSGEGGPTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC QVFRADEVKARVRAEFDAERRRAETTAAPEARAKVDADERQALAAVDAADRALKMAFTRG CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VSAVYHVALFIAGAALLVTLFLPEQHLRRKRRRIESRASAPEQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]