| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763337
Identifier: 108763337
GI number: 108763337
Start: 2473048
End: 2475432
Strand: Reverse
Name: 108763337
Synonym: MXAN_2141
Alternate gene names: NA
Gene position: 2475432-2473048 (Counterclockwise)
Preceding gene: 108758826
Following gene: 108761710
Centisome position: 27.08
GC content: 68.55
Gene sequence:
>2385_bases GTGTGGGAAGGGCTGCCCGACGCGCTCCGGGCTGACCTGCCCCCGTTCCTCCAGGGCCGCGTGCCCGCCGCGGAACACCG ACCCTCCAGGAGGGAAGGCCCGCTCGCCGGGCGTCTTGGAGCCGTGCAGCTCCAGCGCCACCATTCCGGGGACCTCACGC ACTGGAAGGTGATGGTGTCTCCTCCTCCCTTGCCTGCATCCATGGGGTTTGCGCCCACCAATGCGGTGGCCAGACCCGGG AGAGGATGCGTGAACGAGCAGGAGAAGCAGCGGCGGCTTTTGACATACGCGAAGCGGATCGCCCCCTCGGCCGAGACAAT CGAGTCGCTCGCGACGGAAAGCAGCGCCCCGCTCGAGCCAGGTGCCGAGGCCCTGGAACATGCCATCAAGGCGGCCCACG CGGTGACCCGAGGTCTCGAGTCCACCCTACGGCCAGAGGAGCTGTGGGCGCTCGAGGCCATCGTCCTGCCTCGGAACAGA CCGGTCATCGACATCATCAACGGCAGCTACCTGCGCCCCGGGGCCCCCTGGAGCGCCCTGGATGACGCGAACTTCCGCAA GCCCATCGAGGCGGCCATTCCCGCCATCGGACGCGTGGAGGTTTCCGAGCACCCAACGCTGCCGTACGTTGGAACGGGTT TCGTGGTCGGGCGCGGGCTGCTGATGACCAATCGCCACGTTGCCGAGCTGTTCACGCTGGGGCTGGGGATGCGGGGACTG CGGTTCCAGCCGGGGCTCGACAACGTGCAGGTAGACTTCAAGCGGGAGCGCGGCTCGAGCGCGTCCGCGCCCTTCCGCGT GCGGCGTGTCCTGATGATTCATCCCTACTGGGACATGGCGCTGATGGAGGTAGAGGGGGTTGATGGACTGCGGCCCCTCA CCCTGGATTCGCGCCACGTGGACGAGGTGCGCGAGCAGGACGTCGTCGTCATCGGGTATCCCGCGCAGGACCCGCGCAAC GATGCCGCGCTCCAGCACCGCATCTTCCGGGGCGTCTACCAGGTCAAGCGCCTGCAGCCGGGTAAGATCATGGGCGCACG GCGCACCTCGAGCTTCGGCCGGATGGTGGAGGCGCTCGCGCACGACAGCTCGACGCTCGGAGGCAACTCTGGCTCGGCCA TCTTGGATGCGCGCTCGGGCAAGGTGCTCGGGCTCCACTTCGGGGGCCGGTACCTCGAAGCGAACTACGCGGTGTCCGCC CATGACCTCAGCCGGGACTCCCGCGTGGTCGATGCCGGGGTGCTCTTCACGAAGACGAACGTCGGAGGACAGCTCCCATG GGCGAACGCGTGGAAGGACAACGAGGGCCCCCCGGCGATGCCGCCTTCGCCTCTTCCGCCGTCTCCCGTCCTCTTCGTCC CGGCGCCGAGCGGCGAGTCCCTGGCGCTCACCATTCCGCTCCACATCACCCTCCGCCTGGGGGTTCCCGCCCTGGCGGGG AATGGCCAGACCGCGCTCGTCCCCGGGCCGGCAGTGCCCCCGCCAGTGCCAAGCCAACTCTGGGGAGGCGTGGGGGCTGG GGCACCGGGCCTGACACAGGTCGACGTCGCGGCGGCTGTCGCGGAAGCCCAGCGGACGCGGGACCTCCCCTATTACGACG CCGAGGCGGACGCGCTGGACCGGGAGCGCTACTACGCAGGTGTGCAGCCGGACTCCGACCAGGACGCGTTCTATGACGGC CTGCACGGCCTCCTCGAGCGGACGCATACGGTCCGCCCATCTTACGATCCGAGCCGCTGGCTCTATCCATGGGTGGACCG CCAGAAGGACCTCCTCCTCCGCTCGCTGTACTCGGCGGCGGGCCACTCCTTCACGCTCCAGGAGATCCTTCAGAAGGACC TGGAGGTGGAGAGGGAGCGTGCGCTACGGCTCCTGGAGCGGCCACTGACAGAGAGTCTCGACGAGGGCTTCCTGGAGCAG CTTGAGTCCGCCCTGCCGTACAACTGCGAGCACGTCGTGCCCCAGTCCTGGTTCAAGGCCAGGGAGCCGATGCGCGGAGA CCTGCACCACCTGTTCGCCTGCGAGATGCGCTGCAACAGCTTCCGCAGCAACAATGCCTACTTCGAGTTCCCCAGCACCG AGGCCTTCCAAGAAGACTGCGGGCGGGCCGAGCAGAACCGGTTCGAGCCGGGCGCCGGGAAGGGAGCCGCCGCGCGCGCC ACGCTCTACTTCCTCGTCCGCTATCCCAACGCCATCAACAGCCCGGCGGAGCTCGCCGAGGAGCGGCTGGAGACGCTGCT GCGCTGGCACCAGCAAGAACTCCCCTCCGAGTGGGAGCTGCATCGGAACCAGGCCATCTTCTCCATCCAGAAGAACCGCA ACCCCTTCATCGACTTCCCGGAGTGGGCGGCGCGGGTACGCTTCGCCCGCGGACTGGGGCGCTGA
Upstream 100 bases:
>100_bases TGGGCCCAAGACGCTCGTGCCCTCTGGCGTCCGCGACCTGTTCCTGCTGGGGCTGAAGCCCTGACGGAGCCTGCCCCGCC CTGGCTTGTTGTGACACCGG
Downstream 100 bases:
>100_bases TCTGGCCCGGCCCCTTCCGCGCGCAGCAGGCGGGGAAGGGCCTCAGCATCGCACATTGAACAGAGTGGCCCGCTCGTCAG GACACCGCAGGTAGGCATCA
Product: EndA/NucM family protease / nuclease
Products: NA
Alternate protein names: DNA/RNA Non-Specific Endonuclease; Extracellular Ribonuclease; Phospholipase D/Transphosphatidylase; Secreted Nuclease; Nuclease; Peptidase S1 And S6 Chymotrypsin/Hap; Peptidase S8 And; Membrane Nuclease; Serine Protease; Endonuclease I Domain-Containing Protein; Secreted Ribonuclease; LOW QUALITY PROTEIN EndA/NucM Family Protease/Nuclease; EndA/NucM Family Protease / Nuclease; Protease; Peptidase S7 Flavivirus Helicase
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MWEGLPDALRADLPPFLQGRVPAAEHRPSRREGPLAGRLGAVQLQRHHSGDLTHWKVMVSPPPLPASMGFAPTNAVARPG RGCVNEQEKQRRLLTYAKRIAPSAETIESLATESSAPLEPGAEALEHAIKAAHAVTRGLESTLRPEELWALEAIVLPRNR PVIDIINGSYLRPGAPWSALDDANFRKPIEAAIPAIGRVEVSEHPTLPYVGTGFVVGRGLLMTNRHVAELFTLGLGMRGL RFQPGLDNVQVDFKRERGSSASAPFRVRRVLMIHPYWDMALMEVEGVDGLRPLTLDSRHVDEVREQDVVVIGYPAQDPRN DAALQHRIFRGVYQVKRLQPGKIMGARRTSSFGRMVEALAHDSSTLGGNSGSAILDARSGKVLGLHFGGRYLEANYAVSA HDLSRDSRVVDAGVLFTKTNVGGQLPWANAWKDNEGPPAMPPSPLPPSPVLFVPAPSGESLALTIPLHITLRLGVPALAG NGQTALVPGPAVPPPVPSQLWGGVGAGAPGLTQVDVAAAVAEAQRTRDLPYYDAEADALDRERYYAGVQPDSDQDAFYDG LHGLLERTHTVRPSYDPSRWLYPWVDRQKDLLLRSLYSAAGHSFTLQEILQKDLEVERERALRLLERPLTESLDEGFLEQ LESALPYNCEHVVPQSWFKAREPMRGDLHHLFACEMRCNSFRSNNAYFEFPSTEAFQEDCGRAEQNRFEPGAGKGAAARA TLYFLVRYPNAINSPAELAEERLETLLRWHQQELPSEWELHRNQAIFSIQKNRNPFIDFPEWAARVRFARGLGR
Sequences:
>Translated_794_residues MWEGLPDALRADLPPFLQGRVPAAEHRPSRREGPLAGRLGAVQLQRHHSGDLTHWKVMVSPPPLPASMGFAPTNAVARPG RGCVNEQEKQRRLLTYAKRIAPSAETIESLATESSAPLEPGAEALEHAIKAAHAVTRGLESTLRPEELWALEAIVLPRNR PVIDIINGSYLRPGAPWSALDDANFRKPIEAAIPAIGRVEVSEHPTLPYVGTGFVVGRGLLMTNRHVAELFTLGLGMRGL RFQPGLDNVQVDFKRERGSSASAPFRVRRVLMIHPYWDMALMEVEGVDGLRPLTLDSRHVDEVREQDVVVIGYPAQDPRN DAALQHRIFRGVYQVKRLQPGKIMGARRTSSFGRMVEALAHDSSTLGGNSGSAILDARSGKVLGLHFGGRYLEANYAVSA HDLSRDSRVVDAGVLFTKTNVGGQLPWANAWKDNEGPPAMPPSPLPPSPVLFVPAPSGESLALTIPLHITLRLGVPALAG NGQTALVPGPAVPPPVPSQLWGGVGAGAPGLTQVDVAAAVAEAQRTRDLPYYDAEADALDRERYYAGVQPDSDQDAFYDG LHGLLERTHTVRPSYDPSRWLYPWVDRQKDLLLRSLYSAAGHSFTLQEILQKDLEVERERALRLLERPLTESLDEGFLEQ LESALPYNCEHVVPQSWFKAREPMRGDLHHLFACEMRCNSFRSNNAYFEFPSTEAFQEDCGRAEQNRFEPGAGKGAAARA TLYFLVRYPNAINSPAELAEERLETLLRWHQQELPSEWELHRNQAIFSIQKNRNPFIDFPEWAARVRFARGLGR >Mature_794_residues MWEGLPDALRADLPPFLQGRVPAAEHRPSRREGPLAGRLGAVQLQRHHSGDLTHWKVMVSPPPLPASMGFAPTNAVARPG RGCVNEQEKQRRLLTYAKRIAPSAETIESLATESSAPLEPGAEALEHAIKAAHAVTRGLESTLRPEELWALEAIVLPRNR PVIDIINGSYLRPGAPWSALDDANFRKPIEAAIPAIGRVEVSEHPTLPYVGTGFVVGRGLLMTNRHVAELFTLGLGMRGL RFQPGLDNVQVDFKRERGSSASAPFRVRRVLMIHPYWDMALMEVEGVDGLRPLTLDSRHVDEVREQDVVVIGYPAQDPRN DAALQHRIFRGVYQVKRLQPGKIMGARRTSSFGRMVEALAHDSSTLGGNSGSAILDARSGKVLGLHFGGRYLEANYAVSA HDLSRDSRVVDAGVLFTKTNVGGQLPWANAWKDNEGPPAMPPSPLPPSPVLFVPAPSGESLALTIPLHITLRLGVPALAG NGQTALVPGPAVPPPVPSQLWGGVGAGAPGLTQVDVAAAVAEAQRTRDLPYYDAEADALDRERYYAGVQPDSDQDAFYDG LHGLLERTHTVRPSYDPSRWLYPWVDRQKDLLLRSLYSAAGHSFTLQEILQKDLEVERERALRLLERPLTESLDEGFLEQ LESALPYNCEHVVPQSWFKAREPMRGDLHHLFACEMRCNSFRSNNAYFEFPSTEAFQEDCGRAEQNRFEPGAGKGAAARA TLYFLVRYPNAINSPAELAEERLETLLRWHQQELPSEWELHRNQAIFSIQKNRNPFIDFPEWAARVRFARGLGR
Specific function: Unknown
COG id: COG2356
COG function: function code L; Endonuclease I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87821; Mature: 87821
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEGLPDALRADLPPFLQGRVPAAEHRPSRREGPLAGRLGAVQLQRHHSGDLTHWKVMVS CCCCCCHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC PPPLPASMGFAPTNAVARPGRGCVNEQEKQRRLLTYAKRIAPSAETIESLATESSAPLEP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC GAEALEHAIKAAHAVTRGLESTLRPEELWALEAIVLPRNRPVIDIINGSYLRPGAPWSAL CHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCEEEECCCCEECCCCCCCCC DDANFRKPIEAAIPAIGRVEVSEHPTLPYVGTGFVVGRGLLMTNRHVAELFTLGLGMRGL CCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHCCCCCC RFQPGLDNVQVDFKRERGSSASAPFRVRRVLMIHPYWDMALMEVEGVDGLRPLTLDSRHV CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHH DEVREQDVVVIGYPAQDPRNDAALQHRIFRGVYQVKRLQPGKIMGARRTSSFGRMVEALA HHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH HDSSTLGGNSGSAILDARSGKVLGLHFGGRYLEANYAVSAHDLSRDSRVVDAGVLFTKTN CCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEECCEEEHHHCCCCCEEEECCEEEEECC VGGQLPWANAWKDNEGPPAMPPSPLPPSPVLFVPAPSGESLALTIPLHITLRLGVPALAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCEECC NGQTALVPGPAVPPPVPSQLWGGVGAGAPGLTQVDVAAAVAEAQRTRDLPYYDAEADALD CCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH RERYYAGVQPDSDQDAFYDGLHGLLERTHTVRPSYDPSRWLYPWVDRQKDLLLRSLYSAA HHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHC GHSFTLQEILQKDLEVERERALRLLERPLTESLDEGFLEQLESALPYNCEHVVPQSWFKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH REPMRGDLHHLFACEMRCNSFRSNNAYFEFPSTEAFQEDCGRAEQNRFEPGAGKGAAARA CCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCHHHHCCCCCCCCCCHHHE TLYFLVRYPNAINSPAELAEERLETLLRWHQQELPSEWELHRNQAIFSIQKNRNPFIDFP EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCCH EWAARVRFARGLGR HHHHHHHHHHHCCC >Mature Secondary Structure MWEGLPDALRADLPPFLQGRVPAAEHRPSRREGPLAGRLGAVQLQRHHSGDLTHWKVMVS CCCCCCHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC PPPLPASMGFAPTNAVARPGRGCVNEQEKQRRLLTYAKRIAPSAETIESLATESSAPLEP CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC GAEALEHAIKAAHAVTRGLESTLRPEELWALEAIVLPRNRPVIDIINGSYLRPGAPWSAL CHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCEEEECCCCEECCCCCCCCC DDANFRKPIEAAIPAIGRVEVSEHPTLPYVGTGFVVGRGLLMTNRHVAELFTLGLGMRGL CCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHCCCCCC RFQPGLDNVQVDFKRERGSSASAPFRVRRVLMIHPYWDMALMEVEGVDGLRPLTLDSRHV CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHH DEVREQDVVVIGYPAQDPRNDAALQHRIFRGVYQVKRLQPGKIMGARRTSSFGRMVEALA HHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH HDSSTLGGNSGSAILDARSGKVLGLHFGGRYLEANYAVSAHDLSRDSRVVDAGVLFTKTN CCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEECCEEEHHHCCCCCEEEECCEEEEECC VGGQLPWANAWKDNEGPPAMPPSPLPPSPVLFVPAPSGESLALTIPLHITLRLGVPALAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCEECC NGQTALVPGPAVPPPVPSQLWGGVGAGAPGLTQVDVAAAVAEAQRTRDLPYYDAEADALD CCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH RERYYAGVQPDSDQDAFYDGLHGLLERTHTVRPSYDPSRWLYPWVDRQKDLLLRSLYSAA HHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHC GHSFTLQEILQKDLEVERERALRLLERPLTESLDEGFLEQLESALPYNCEHVVPQSWFKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH REPMRGDLHHLFACEMRCNSFRSNNAYFEFPSTEAFQEDCGRAEQNRFEPGAGKGAAARA CCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCHHHHCCCCCCCCCCHHHE TLYFLVRYPNAINSPAELAEERLETLLRWHQQELPSEWELHRNQAIFSIQKNRNPFIDFP EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCCCH EWAARVRFARGLGR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA