| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is atoC [C]
Identifier: 108763322
GI number: 108763322
Start: 6319172
End: 6320671
Strand: Reverse
Name: atoC [C]
Synonym: MXAN_5052
Alternate gene names: 108763322
Gene position: 6320671-6319172 (Counterclockwise)
Preceding gene: 108757101
Following gene: 108762137
Centisome position: 69.16
GC content: 71.93
Gene sequence:
>1500_bases GTGGCCCCGGTCCGGAAAATCCTCATCGCCGACCCTGACCTCGAGTCGGTGCGCTCGCTGTCGCGGGCGCTGCGCACCAA GGGCTATCAGGTGCACTACGCGCCGGATGGCTCGCGGGCCCTGGAGGTGGCCGTGCTGCGCCACCCGGACCTCACGCTGT TCGACGAGGCCTGCCGGCTGCTGGACGCGCGCACCTTCATCCAGATTCTGCGCACCAACCCGCGCACCGAGGACATCCCG GTGGTGCTCACCACCGCGAGCTTCGAGTCGGACCGGCTGCGCGGCCTGCGGGACGGCTATCTGCGCAAGCCCTTCAACCT GGACGAGGTGCTCAGCCGCATCGAGCACATCTTCCGGCGCAGCGAGGCGGCCAAGGACCTCAAGAGCGAGCAGCAGGAAA TCGAAGGCTCGCTCAGCCAGCTCAGCATCCCGGACCTGATGCAGTTGTTGGGCATGAACCGGCGCAGCGGCCGGCTGACG CTGGAGCGCGGCAACGACCGGGGCGAGATTTCCGTCGTCGAAGGCCGCCCGGTGAATGCGAAGCTGGGGCGCGTGGAAGG GGAGAAGGCCCTGTTCCGCCTGCTGGCGTGGGTGGACGGGACGTTCACCTTCTCGCCCGGAGGCAACACGGCACGGCCGC GCATCAACCGCGGCATGGATGACGCGCTGCTGGAGGGCATGCGTCAGTCGGACGAGGTGAACCGGCTGATGCCCGGCCTG CCGCCGCGCCACACGCGGCTGATGCTGGCGCCGGACGCGGACCTGCAAGGAGACCAGCATCCGGTGACGCAGCAGGTGGT GGACCTGCTTCGCCAGCCACGCGCCCTGGGCGAGGTGCTGGACCTGGCGCCGGCCACCGACCTGGAGGTGCTCAACGTCC TCACCACGCTCATGCAGCGGGGCGTGGCGAGAGCCGCGGACGGGGACGGCGTGGAGGCTGCGTCCGGCGAGCTGCTGGGC GCGGCGGAGGTGCACGCGCTGCGCGGCCGGATTCTCCGCACGCGAGCGCCCGCGAAGGTGGCCACCGCGAAAATCTTCGT GTGCGGCAGTGGCGCGAGCGCGGCCCGGCGGGTCCTCTCCCGCATGCCCGGCATGGAAGCGCTGTCGGCCGAGCCCACCG CGGTGAAGAGTGGTTTCGGCACGCTGGGGCGCCTGGTGCTCAGCGAGGTGCTGCGCCTGGACTTCTGCGTGCTGCCTCCC GCGGAGGCGGCGCGGCCGCTGTGGCGTCCCTTCACGGCGGGCGCCATGGGCGCGCTGCTGATGGATGTGGCCGAGCCCTC CGTGCGGCTCGCGCACTACCTGGCCTGGGAGGTCCGGATGCCGGTGGTGGTGGTGGGCGCGGAGGTCCCCGCGGCGTTGC AGGGGGCTCCCGCGGGAGCCCTGGGCGCGACGGATGACCTGGCGGACGCGCTGCGCTCACTGTTGGTCCAGGCGCTCAAT CCCGCGCCCACGCTGCCCGGCGTGCCCCAGGTGCAGCGGGCCGCCGCGTCCATCGTGTAG
Upstream 100 bases:
>100_bases GGGTTCCACACCTCGGACACCGCGGTGGTGGACGGGCTCATCTCCAAGCTGCAGGCCGAATACGACCTGCAGCCCTACTG ACACGAAGCGGAGCGCCACC
Downstream 100 bases:
>100_bases GGCGAGGCCGCTTCACAGCCGCGCGAGAATCTCCGCCTTCTTCTGCGCGTATTCGTCCTGCGTGATGAGCTCGTTGTCGA GCATCGACTGGAGGTCCTTC
Product: response regulator
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver Domain-Containing Protein; FHA Domain-Containing Protein; Roadblock/LC7 Family Protein
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MAPVRKILIADPDLESVRSLSRALRTKGYQVHYAPDGSRALEVAVLRHPDLTLFDEACRLLDARTFIQILRTNPRTEDIP VVLTTASFESDRLRGLRDGYLRKPFNLDEVLSRIEHIFRRSEAAKDLKSEQQEIEGSLSQLSIPDLMQLLGMNRRSGRLT LERGNDRGEISVVEGRPVNAKLGRVEGEKALFRLLAWVDGTFTFSPGGNTARPRINRGMDDALLEGMRQSDEVNRLMPGL PPRHTRLMLAPDADLQGDQHPVTQQVVDLLRQPRALGEVLDLAPATDLEVLNVLTTLMQRGVARAADGDGVEAASGELLG AAEVHALRGRILRTRAPAKVATAKIFVCGSGASAARRVLSRMPGMEALSAEPTAVKSGFGTLGRLVLSEVLRLDFCVLPP AEAARPLWRPFTAGAMGALLMDVAEPSVRLAHYLAWEVRMPVVVVGAEVPAALQGAPAGALGATDDLADALRSLLVQALN PAPTLPGVPQVQRAAASIV
Sequences:
>Translated_499_residues MAPVRKILIADPDLESVRSLSRALRTKGYQVHYAPDGSRALEVAVLRHPDLTLFDEACRLLDARTFIQILRTNPRTEDIP VVLTTASFESDRLRGLRDGYLRKPFNLDEVLSRIEHIFRRSEAAKDLKSEQQEIEGSLSQLSIPDLMQLLGMNRRSGRLT LERGNDRGEISVVEGRPVNAKLGRVEGEKALFRLLAWVDGTFTFSPGGNTARPRINRGMDDALLEGMRQSDEVNRLMPGL PPRHTRLMLAPDADLQGDQHPVTQQVVDLLRQPRALGEVLDLAPATDLEVLNVLTTLMQRGVARAADGDGVEAASGELLG AAEVHALRGRILRTRAPAKVATAKIFVCGSGASAARRVLSRMPGMEALSAEPTAVKSGFGTLGRLVLSEVLRLDFCVLPP AEAARPLWRPFTAGAMGALLMDVAEPSVRLAHYLAWEVRMPVVVVGAEVPAALQGAPAGALGATDDLADALRSLLVQALN PAPTLPGVPQVQRAAASIV >Mature_498_residues APVRKILIADPDLESVRSLSRALRTKGYQVHYAPDGSRALEVAVLRHPDLTLFDEACRLLDARTFIQILRTNPRTEDIPV VLTTASFESDRLRGLRDGYLRKPFNLDEVLSRIEHIFRRSEAAKDLKSEQQEIEGSLSQLSIPDLMQLLGMNRRSGRLTL ERGNDRGEISVVEGRPVNAKLGRVEGEKALFRLLAWVDGTFTFSPGGNTARPRINRGMDDALLEGMRQSDEVNRLMPGLP PRHTRLMLAPDADLQGDQHPVTQQVVDLLRQPRALGEVLDLAPATDLEVLNVLTTLMQRGVARAADGDGVEAASGELLGA AEVHALRGRILRTRAPAKVATAKIFVCGSGASAARRVLSRMPGMEALSAEPTAVKSGFGTLGRLVLSEVLRLDFCVLPPA EAARPLWRPFTAGAMGALLMDVAEPSVRLAHYLAWEVRMPVVVVGAEVPAALQGAPAGALGATDDLADALRSLLVQALNP APTLPGVPQVQRAAASIV
Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53959; Mature: 53828
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPVRKILIADPDLESVRSLSRALRTKGYQVHYAPDGSRALEVAVLRHPDLTLFDEACRL CCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHH LDARTFIQILRTNPRTEDIPVVLTTASFESDRLRGLRDGYLRKPFNLDEVLSRIEHIFRR HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SEAAKDLKSEQQEIEGSLSQLSIPDLMQLLGMNRRSGRLTLERGNDRGEISVVEGRPVNA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCC KLGRVEGEKALFRLLAWVDGTFTFSPGGNTARPRINRGMDDALLEGMRQSDEVNRLMPGL HHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PPRHTRLMLAPDADLQGDQHPVTQQVVDLLRQPRALGEVLDLAPATDLEVLNVLTTLMQR CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH GVARAADGDGVEAASGELLGAAEVHALRGRILRTRAPAKVATAKIFVCGSGASAARRVLS CCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHH RMPGMEALSAEPTAVKSGFGTLGRLVLSEVLRLDFCVLPPAEAARPLWRPFTAGAMGALL HCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCHHCCHHHHHHHHHH MDVAEPSVRLAHYLAWEVRMPVVVVGAEVPAALQGAPAGALGATDDLADALRSLLVQALN HHHCCCHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC PAPTLPGVPQVQRAAASIV CCCCCCCCHHHHHHHHHCC >Mature Secondary Structure APVRKILIADPDLESVRSLSRALRTKGYQVHYAPDGSRALEVAVLRHPDLTLFDEACRL CCCCEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHH LDARTFIQILRTNPRTEDIPVVLTTASFESDRLRGLRDGYLRKPFNLDEVLSRIEHIFRR HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SEAAKDLKSEQQEIEGSLSQLSIPDLMQLLGMNRRSGRLTLERGNDRGEISVVEGRPVNA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCC KLGRVEGEKALFRLLAWVDGTFTFSPGGNTARPRINRGMDDALLEGMRQSDEVNRLMPGL HHCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PPRHTRLMLAPDADLQGDQHPVTQQVVDLLRQPRALGEVLDLAPATDLEVLNVLTTLMQR CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH GVARAADGDGVEAASGELLGAAEVHALRGRILRTRAPAKVATAKIFVCGSGASAARRVLS CCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHH RMPGMEALSAEPTAVKSGFGTLGRLVLSEVLRLDFCVLPPAEAARPLWRPFTAGAMGALL HCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCHHCCHHHHHHHHHH MDVAEPSVRLAHYLAWEVRMPVVVVGAEVPAALQGAPAGALGATDDLADALRSLLVQALN HHHCCCHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC PAPTLPGVPQVQRAAASIV CCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA