| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is prkA [H]
Identifier: 108763239
GI number: 108763239
Start: 4955499
End: 4957745
Strand: Reverse
Name: prkA [H]
Synonym: MXAN_4046
Alternate gene names: 108763239
Gene position: 4957745-4955499 (Counterclockwise)
Preceding gene: 108762189
Following gene: 108758456
Centisome position: 54.24
GC content: 66.62
Gene sequence:
>2247_bases TTGGACGCGAAGGGTTATCTGCAGGAAGTGGGCGCGCAGGTGAACGCCGACTTCGTCAAGAACCGGTCGATTCTCTCCTT CGAGGAGTATCTCTCCCTCTTCTTCAGCGACCCGAAGGGCCAGGCCCGCAACGCGGCGCAGTACCTGCGGGACGTGATGG ACCACTTCGGCACCACCACGGTGCCGCACCCCACTGGCACCATCCGACGCTTCCAGGTCTTCGACGTACCCGGCAGCGAC CGGGACGACCGGGTGGCGGGCCAGGAGGAGGTGCAGAACGCCATCTACCGGTTGCTCGGCAACTTCGTGCGGGCCGGCCG TATCAACAAGCTCATCCTCCTGCATGGGCCCAATGGCAGCGCCAAGTCCACGCTCGTCAATGCCCTGAAGGCGGGCATGG AGGCGTACTCGCGGCTGCCCCAGGGCGCGCTCTACCGGCTCGCCTGGGTGTTCCCGTCGGAGAAGCTCATCAAGGGCTCC ATCGGCTTCGGCGAGCGGGACTCCGCCAGTGGGGAGATGACCACCTTCGCGCACCTGGACGCGGAGTCCATCGACCTGCG AATGCCGTGCGAGCTGCGGGACCACCCGCTCTTCGCCGTCCCGCCCGGCGAGCGCCGCAGGCTGCTGGAGACGGCGCTCA AGAAGAAGGGCCTGGGCAACGGGGACGGGGAGAGTGGCGACTTCATCCTGTCCGACTACGTGCGGGACGGCGAGCTGTGC TCCAAGTGCCGCCGCATCTACACCGCGCTGCTCAATTCCTACGGCGGGGACTGGCTGAAGGTGATGCGCCACGTCCAGGT GGAGCGCTTCTATGTGTCGCGCCGCTACCAGGTGGGCACGGTGACGGTGGAGCCGCAGATGAGCGTGGACGCCGTCGTCC AGCAGCTCACCGCGGACCGCACCCAGCTCAACGTGCCCGCGCCGCTGCACAGCACGGTGCTCTTCGAGCCGCACGGCCCC CTGGTCCACGCCAACCGCGGCCTCATCGAGTACTCGGACCTGCTCAAGCGGCCCCTGGAGGCCTTCAAGTACCTGCTGGG CTTCAGCGAGACGGGCGAGGTGCCGCTGGAGCCCTTCGTCCTCCAGCTCGACGAGGTGCTCATCGCGTCGGCGAACGAGA AGCACCTCAATGCCTTCAAGGAGCTGCCGGACTTCGCGTCCTTCAAGGGCCGCATCGAACTGGTGCGCGTGCCCTACCTG CGCCGCTACCGCACCGAGCAGCAGATCTACGACGCGCAGATCACCTCCACCACCGTGGGCAAGCACGTGGCGCCCCATGC CACGGAGGTGGCGGCCATGTGGGCGGTGCTCACCCGGCTGAAGAAGCCCATTCCGGACCGCTACCCGCAGGACGTGAAGG AGCTCATCGACCAGGTGACGCCGGTGGAGAAGCTGCACCTCTACGAGGAGGGCGCGCCGCCGGACCGGCTGAGCCTGGCC AACACCAAGGAGCTGCGCAAGCTGCGCGAGGACCTGTTCACGGAGTCGGACGCGTACCCCAACTACGAGGGGCGCTCGGG CGCCAGCGCGCGCGAAATCAAGACGGCGCTCTTCAATGCCGCGCAGAACACCGACTACAAGTGCCTCAACGCGCTGGCGG TGCTGGAGGAGCTGTCCGCCATCTGCAAGGACAAGAGCGTCTACGAGTTCCTCTTGCAGGAGGTGGTGGACGGCTACCAC GACCATGACGCCTTCGTGCGGCTGGCGGAGGCGGAGTACCTGGACCGGGTGGACTCGGAGGTGCGCGAGTCCATGGGCCT GGTGTCGGAGGGGCAGTACCGCGAGCTGGTGGAGCGCTACATCCAGACCATCAGCCACTGGGTGCGCGGAGAGAAGATGC GCAACCGCGTCACCGGGGTGATGGAGGCGCCGGAAGAGCAGCGCATGGTGGAGGTGGAGGTCATCATCATGCCGCGCGGC GAGGACGCAGCCGACTTCCGCCGGGGACTCATCGCCTCCATCGGCGCGCACCGGCTGGACAACCCGGACGCGGTCATGGA CTACGGCCGCATCTTCCCGGACATGTTCAAGCGCCTGCGAGATCACTACTTCGAGGAGCGCAAGCGTGTGCTGCGCAAGA ACAAGGAGAACGTCCTCAAGTACCTGTCCGAGGACCGCAACCAGCTCACCGCGCGCGAGCAGACGCAGGTGCAGAGCACG CTGAAGACGATGGCGGAGCGCTACGGCTACTGCGAGTCGTGCGCGAAGGACGCCATCCTCTTCCTGATGAAGAAGCGCTA CGCGTGA
Upstream 100 bases:
>100_bases AGCAGCGCGTGCCCCAGCCGACAATGGCGTCCGGGGTGCTGGACATTGGTAGCCCGGGCGGAAAACTTGGTGGTGGACGA CGGACCAGAGGAGAGTCAAC
Downstream 100 bases:
>100_bases CCGGGCAGGCGTCCGGGGCCCGCCTGGACGCCTGCTTTCAAAGCCGGAAAGGGCTCGGGATGATGGGGGCTGCCAGGGAG TTGTACTGGCTGCATCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MDAKGYLQEVGAQVNADFVKNRSILSFEEYLSLFFSDPKGQARNAAQYLRDVMDHFGTTTVPHPTGTIRRFQVFDVPGSD RDDRVAGQEEVQNAIYRLLGNFVRAGRINKLILLHGPNGSAKSTLVNALKAGMEAYSRLPQGALYRLAWVFPSEKLIKGS IGFGERDSASGEMTTFAHLDAESIDLRMPCELRDHPLFAVPPGERRRLLETALKKKGLGNGDGESGDFILSDYVRDGELC SKCRRIYTALLNSYGGDWLKVMRHVQVERFYVSRRYQVGTVTVEPQMSVDAVVQQLTADRTQLNVPAPLHSTVLFEPHGP LVHANRGLIEYSDLLKRPLEAFKYLLGFSETGEVPLEPFVLQLDEVLIASANEKHLNAFKELPDFASFKGRIELVRVPYL RRYRTEQQIYDAQITSTTVGKHVAPHATEVAAMWAVLTRLKKPIPDRYPQDVKELIDQVTPVEKLHLYEEGAPPDRLSLA NTKELRKLREDLFTESDAYPNYEGRSGASAREIKTALFNAAQNTDYKCLNALAVLEELSAICKDKSVYEFLLQEVVDGYH DHDAFVRLAEAEYLDRVDSEVRESMGLVSEGQYRELVERYIQTISHWVRGEKMRNRVTGVMEAPEEQRMVEVEVIIMPRG EDAADFRRGLIASIGAHRLDNPDAVMDYGRIFPDMFKRLRDHYFEERKRVLRKNKENVLKYLSEDRNQLTAREQTQVQST LKTMAERYGYCESCAKDAILFLMKKRYA
Sequences:
>Translated_748_residues MDAKGYLQEVGAQVNADFVKNRSILSFEEYLSLFFSDPKGQARNAAQYLRDVMDHFGTTTVPHPTGTIRRFQVFDVPGSD RDDRVAGQEEVQNAIYRLLGNFVRAGRINKLILLHGPNGSAKSTLVNALKAGMEAYSRLPQGALYRLAWVFPSEKLIKGS IGFGERDSASGEMTTFAHLDAESIDLRMPCELRDHPLFAVPPGERRRLLETALKKKGLGNGDGESGDFILSDYVRDGELC SKCRRIYTALLNSYGGDWLKVMRHVQVERFYVSRRYQVGTVTVEPQMSVDAVVQQLTADRTQLNVPAPLHSTVLFEPHGP LVHANRGLIEYSDLLKRPLEAFKYLLGFSETGEVPLEPFVLQLDEVLIASANEKHLNAFKELPDFASFKGRIELVRVPYL RRYRTEQQIYDAQITSTTVGKHVAPHATEVAAMWAVLTRLKKPIPDRYPQDVKELIDQVTPVEKLHLYEEGAPPDRLSLA NTKELRKLREDLFTESDAYPNYEGRSGASAREIKTALFNAAQNTDYKCLNALAVLEELSAICKDKSVYEFLLQEVVDGYH DHDAFVRLAEAEYLDRVDSEVRESMGLVSEGQYRELVERYIQTISHWVRGEKMRNRVTGVMEAPEEQRMVEVEVIIMPRG EDAADFRRGLIASIGAHRLDNPDAVMDYGRIFPDMFKRLRDHYFEERKRVLRKNKENVLKYLSEDRNQLTAREQTQVQST LKTMAERYGYCESCAKDAILFLMKKRYA >Mature_748_residues MDAKGYLQEVGAQVNADFVKNRSILSFEEYLSLFFSDPKGQARNAAQYLRDVMDHFGTTTVPHPTGTIRRFQVFDVPGSD RDDRVAGQEEVQNAIYRLLGNFVRAGRINKLILLHGPNGSAKSTLVNALKAGMEAYSRLPQGALYRLAWVFPSEKLIKGS IGFGERDSASGEMTTFAHLDAESIDLRMPCELRDHPLFAVPPGERRRLLETALKKKGLGNGDGESGDFILSDYVRDGELC SKCRRIYTALLNSYGGDWLKVMRHVQVERFYVSRRYQVGTVTVEPQMSVDAVVQQLTADRTQLNVPAPLHSTVLFEPHGP LVHANRGLIEYSDLLKRPLEAFKYLLGFSETGEVPLEPFVLQLDEVLIASANEKHLNAFKELPDFASFKGRIELVRVPYL RRYRTEQQIYDAQITSTTVGKHVAPHATEVAAMWAVLTRLKKPIPDRYPQDVKELIDQVTPVEKLHLYEEGAPPDRLSLA NTKELRKLREDLFTESDAYPNYEGRSGASAREIKTALFNAAQNTDYKCLNALAVLEELSAICKDKSVYEFLLQEVVDGYH DHDAFVRLAEAEYLDRVDSEVRESMGLVSEGQYRELVERYIQTISHWVRGEKMRNRVTGVMEAPEEQRMVEVEVIIMPRG EDAADFRRGLIASIGAHRLDNPDAVMDYGRIFPDMFKRLRDHYFEERKRVLRKNKENVLKYLSEDRNQLTAREQTQVQST LKTMAERYGYCESCAKDAILFLMKKRYA
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 85185; Mature: 85185
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKGYLQEVGAQVNADFVKNRSILSFEEYLSLFFSDPKGQARNAAQYLRDVMDHFGTTT CCCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC VPHPTGTIRRFQVFDVPGSDRDDRVAGQEEVQNAIYRLLGNFVRAGRINKLILLHGPNGS CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC AKSTLVNALKAGMEAYSRLPQGALYRLAWVFPSEKLIKGSIGFGERDSASGEMTTFAHLD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEECC AESIDLRMPCELRDHPLFAVPPGERRRLLETALKKKGLGNGDGESGDFILSDYVRDGELC CCCCCEECCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCHHH SKCRRIYTALLNSYGGDWLKVMRHVQVERFYVSRRYQVGTVTVEPQMSVDAVVQQLTADR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCH TQLNVPAPLHSTVLFEPHGPLVHANRGLIEYSDLLKRPLEAFKYLLGFSETGEVPLEPFV HCCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LQLDEVLIASANEKHLNAFKELPDFASFKGRIELVRVPYLRRYRTEQQIYDAQITSTTVG HHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHC KHVAPHATEVAAMWAVLTRLKKPIPDRYPQDVKELIDQVTPVEKLHLYEEGAPPDRLSLA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC NTKELRKLREDLFTESDAYPNYEGRSGASAREIKTALFNAAQNTDYKCLNALAVLEELSA CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ICKDKSVYEFLLQEVVDGYHDHDAFVRLAEAEYLDRVDSEVRESMGLVSEGQYRELVERY HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IQTISHWVRGEKMRNRVTGVMEAPEEQRMVEVEVIIMPRGEDAADFRRGLIASIGAHRLD HHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCC NPDAVMDYGRIFPDMFKRLRDHYFEERKRVLRKNKENVLKYLSEDRNQLTAREQTQVQST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LKTMAERYGYCESCAKDAILFLMKKRYA HHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDAKGYLQEVGAQVNADFVKNRSILSFEEYLSLFFSDPKGQARNAAQYLRDVMDHFGTTT CCCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC VPHPTGTIRRFQVFDVPGSDRDDRVAGQEEVQNAIYRLLGNFVRAGRINKLILLHGPNGS CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC AKSTLVNALKAGMEAYSRLPQGALYRLAWVFPSEKLIKGSIGFGERDSASGEMTTFAHLD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEECC AESIDLRMPCELRDHPLFAVPPGERRRLLETALKKKGLGNGDGESGDFILSDYVRDGELC CCCCCEECCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCHHH SKCRRIYTALLNSYGGDWLKVMRHVQVERFYVSRRYQVGTVTVEPQMSVDAVVQQLTADR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCH TQLNVPAPLHSTVLFEPHGPLVHANRGLIEYSDLLKRPLEAFKYLLGFSETGEVPLEPFV HCCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LQLDEVLIASANEKHLNAFKELPDFASFKGRIELVRVPYLRRYRTEQQIYDAQITSTTVG HHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHC KHVAPHATEVAAMWAVLTRLKKPIPDRYPQDVKELIDQVTPVEKLHLYEEGAPPDRLSLA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC NTKELRKLREDLFTESDAYPNYEGRSGASAREIKTALFNAAQNTDYKCLNALAVLEELSA CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ICKDKSVYEFLLQEVVDGYHDHDAFVRLAEAEYLDRVDSEVRESMGLVSEGQYRELVERY HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IQTISHWVRGEKMRNRVTGVMEAPEEQRMVEVEVIIMPRGEDAADFRRGLIASIGAHRLD HHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCC NPDAVMDYGRIFPDMFKRLRDHYFEERKRVLRKNKENVLKYLSEDRNQLTAREQTQVQST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LKTMAERYGYCESCAKDAILFLMKKRYA HHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]