| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763230
Identifier: 108763230
GI number: 108763230
Start: 1364010
End: 1365590
Strand: Reverse
Name: 108763230
Synonym: MXAN_1171
Alternate gene names: NA
Gene position: 1365590-1364010 (Counterclockwise)
Preceding gene: 108759212
Following gene: 108762269
Centisome position: 14.94
GC content: 69.77
Gene sequence:
>1581_bases ATGAAGCTCGCCGAGACTGCTCCGATCCCTGCTCCCGAAGCGCTGCCCGCTGCCCCCCTGTCCCTGGACGAGGTACGCCG CATCACCCAGCTCCTGGAGGCCATCAGCGAGGACCGCTTCCTGTTGGCCGGCCTCCCCGAGGAGGACCGCATCGCCTTCC TGAGCGCCGCGGGCCGCGTGCTGCACCCGGACCGCGACACCAAGTCCCGGATGGCGAAGGCGCTGCGCCGAGACAGGAAG AAGACGAAGCGCGAGCACGACCGCGCCATCCGCGCCACGACGGAGATTCGCACCCTGCGTCGCTCCGCCATCTTCACGGT GCCGGCGCTGCCCCCGCCGCCTCCCTCGGAACCCGGGCCAGAGCGCATCCTCGAGCAGCCCCGCCGCTGCTACGTCTGCA AGGCCGAGTACCGCAAGCTGCACTACTTCTACGACGCGATGTGCATCGAGTGCGCGGACTACAACTACGCCAAGCGCACC CAGCGCGCCGACCTGAATGGGAAGGTCGCGCTCATCACCGGCGCCCGGGTGAAGATTGGCTTCCAGGCCTCGCTGATGCT GCTGCGCTCCGGCGCGCGCGTCATCGCCACCACGCGCTTCCCCAACGACGCCGCGAAGCGCTACGTCCAGGAGCCGGACT TCGCGGACTGGGCGCACCGGCTGCACATCCACGGGCTCGACCTGCGGCACGCGCCCAGCGTGGAGCTCTTCGCGAAGTAC ATCGAGCAGACGCACGAGCGCCTGGACATCCTCATCAACAACGCCGCGCAGACGGTGCGCCGGCCGCCGGGCTTCTACGG CCACCTGCTGCCGGGAGAGATGCGCCGCGCGGACGACCTGCCGGCGGCGGCGCGCGCGCTGCTCGCGGGCCATGACGCCT GCGTCTCCACGGTGCAACCGGCCGCCCTGGGCGCGGGCAACGCGGGCGGTTCGGAGCTGGCCACCACCTGGCGCAGCAGC GACCCGGCGCTGGGCATCCACTCCTCCGCCGCGCTGTCCATGCTGCCCTACAACCTGGAGCAGGAGGGTGACGAGCGCGC CCTCTTCCCCCAGGGCCGGCTGGACGCGGACCTGCAGCAGGTGGACCTGCGGGACATGAACTCGTGGCGACTGCGGCTCG CCGATGTCCAGACGGCGGAGATGCTGGAGGTCCACCTCATCAACGCGGTGGCGCCCTTCATCCTCGTCGGGAAGCTGAAG CCGCTGATGCTCAGGGACCGCTCGTCCCCCGGCCACGTGGTGAACGTCTCCGCGATGGAGGGCAGCTTCTCGCGCGGGAC GAAGACGGACAAACACCCGCACACCAACATGGCGAAGGCGGCGCTCAACATGATGACGCTGACCTCCGCGCCGGACTACG CCCGCGACAACATCTACATGAACGCCGTGGACACCGGCTGGGTCACCGACGAGGACCCCGCGCAGCACGCGGAGCGCAAG GTGCAGGAGCTGGACTTCCAGCCACCGCTGGACATCGTCGACGGGGCGGCGCGGGTGGTGGACCCCATCATCGCCTCGGA GAACAGCGGCGAGTACGTCTGGGGCAACTTCTTCAAGGACTACCGTCACACCGCGTGGTGA
Upstream 100 bases:
>100_bases CCCGAGCTTGGCGCCCGGGCGTCCGCCTCCCCTGCCGCCGGGCCCCCTCCCCCTGCCCCTCTTTCCACCCGCCCCCTTCG GAAGATATGGAGCGGGGGAG
Downstream 100 bases:
>100_bases CACGCGGACCGGGGGCGTCATGGCAACCCGCAGTCTCCGCTTCGAATCGTACGTGGAGGTCACCCCCGCTGAAGCCTGGG CGTGGGTGACGTCGATGAAG
Product: short chain dehydrogenase/reductase family oxidoreductase
Products: NA
Alternate protein names: Short Chain Dehydrogenase; Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short-Chain Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short-Chain Alcohol Dehydrogenase Like Protein; Short-Chain Dehydrogenases/Reductases Family Protein; Short-Chain Dehydrogenase/Reductase SDR
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MKLAETAPIPAPEALPAAPLSLDEVRRITQLLEAISEDRFLLAGLPEEDRIAFLSAAGRVLHPDRDTKSRMAKALRRDRK KTKREHDRAIRATTEIRTLRRSAIFTVPALPPPPPSEPGPERILEQPRRCYVCKAEYRKLHYFYDAMCIECADYNYAKRT QRADLNGKVALITGARVKIGFQASLMLLRSGARVIATTRFPNDAAKRYVQEPDFADWAHRLHIHGLDLRHAPSVELFAKY IEQTHERLDILINNAAQTVRRPPGFYGHLLPGEMRRADDLPAAARALLAGHDACVSTVQPAALGAGNAGGSELATTWRSS DPALGIHSSAALSMLPYNLEQEGDERALFPQGRLDADLQQVDLRDMNSWRLRLADVQTAEMLEVHLINAVAPFILVGKLK PLMLRDRSSPGHVVNVSAMEGSFSRGTKTDKHPHTNMAKAALNMMTLTSAPDYARDNIYMNAVDTGWVTDEDPAQHAERK VQELDFQPPLDIVDGAARVVDPIIASENSGEYVWGNFFKDYRHTAW
Sequences:
>Translated_526_residues MKLAETAPIPAPEALPAAPLSLDEVRRITQLLEAISEDRFLLAGLPEEDRIAFLSAAGRVLHPDRDTKSRMAKALRRDRK KTKREHDRAIRATTEIRTLRRSAIFTVPALPPPPPSEPGPERILEQPRRCYVCKAEYRKLHYFYDAMCIECADYNYAKRT QRADLNGKVALITGARVKIGFQASLMLLRSGARVIATTRFPNDAAKRYVQEPDFADWAHRLHIHGLDLRHAPSVELFAKY IEQTHERLDILINNAAQTVRRPPGFYGHLLPGEMRRADDLPAAARALLAGHDACVSTVQPAALGAGNAGGSELATTWRSS DPALGIHSSAALSMLPYNLEQEGDERALFPQGRLDADLQQVDLRDMNSWRLRLADVQTAEMLEVHLINAVAPFILVGKLK PLMLRDRSSPGHVVNVSAMEGSFSRGTKTDKHPHTNMAKAALNMMTLTSAPDYARDNIYMNAVDTGWVTDEDPAQHAERK VQELDFQPPLDIVDGAARVVDPIIASENSGEYVWGNFFKDYRHTAW >Mature_526_residues MKLAETAPIPAPEALPAAPLSLDEVRRITQLLEAISEDRFLLAGLPEEDRIAFLSAAGRVLHPDRDTKSRMAKALRRDRK KTKREHDRAIRATTEIRTLRRSAIFTVPALPPPPPSEPGPERILEQPRRCYVCKAEYRKLHYFYDAMCIECADYNYAKRT QRADLNGKVALITGARVKIGFQASLMLLRSGARVIATTRFPNDAAKRYVQEPDFADWAHRLHIHGLDLRHAPSVELFAKY IEQTHERLDILINNAAQTVRRPPGFYGHLLPGEMRRADDLPAAARALLAGHDACVSTVQPAALGAGNAGGSELATTWRSS DPALGIHSSAALSMLPYNLEQEGDERALFPQGRLDADLQQVDLRDMNSWRLRLADVQTAEMLEVHLINAVAPFILVGKLK PLMLRDRSSPGHVVNVSAMEGSFSRGTKTDKHPHTNMAKAALNMMTLTSAPDYARDNIYMNAVDTGWVTDEDPAQHAERK VQELDFQPPLDIVDGAARVVDPIIASENSGEYVWGNFFKDYRHTAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58645; Mature: 58645
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAETAPIPAPEALPAAPLSLDEVRRITQLLEAISEDRFLLAGLPEEDRIAFLSAAGRV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHEEEEECCCCE LHPDRDTKSRMAKALRRDRKKTKREHDRAIRATTEIRTLRRSAIFTVPALPPPPPSEPGP ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCH ERILEQPRRCYVCKAEYRKLHYFYDAMCIECADYNYAKRTQRADLNGKVALITGARVKIG HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCEEEEC FQASLMLLRSGARVIATTRFPNDAAKRYVQEPDFADWAHRLHIHGLDLRHAPSVELFAKY HHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCHHHHHHH IEQTHERLDILINNAAQTVRRPPGFYGHLLPGEMRRADDLPAAARALLAGHDACVSTVQP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCHHHHHHCCC AALGAGNAGGSELATTWRSSDPALGIHSSAALSMLPYNLEQEGDERALFPQGRLDADLQQ HHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH VDLRDMNSWRLRLADVQTAEMLEVHLINAVAPFILVGKLKPLMLRDRSSPGHVVNVSAME HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEC GSFSRGTKTDKHPHTNMAKAALNMMTLTSAPDYARDNIYMNAVDTGWVTDEDPAQHAERK CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH VQELDFQPPLDIVDGAARVVDPIIASENSGEYVWGNFFKDYRHTAW HHHCCCCCCHHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC >Mature Secondary Structure MKLAETAPIPAPEALPAAPLSLDEVRRITQLLEAISEDRFLLAGLPEEDRIAFLSAAGRV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHEEEEECCCCE LHPDRDTKSRMAKALRRDRKKTKREHDRAIRATTEIRTLRRSAIFTVPALPPPPPSEPGP ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCH ERILEQPRRCYVCKAEYRKLHYFYDAMCIECADYNYAKRTQRADLNGKVALITGARVKIG HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCEEEEC FQASLMLLRSGARVIATTRFPNDAAKRYVQEPDFADWAHRLHIHGLDLRHAPSVELFAKY HHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCHHHHHHH IEQTHERLDILINNAAQTVRRPPGFYGHLLPGEMRRADDLPAAARALLAGHDACVSTVQP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCHHHHHHCCC AALGAGNAGGSELATTWRSSDPALGIHSSAALSMLPYNLEQEGDERALFPQGRLDADLQQ HHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH VDLRDMNSWRLRLADVQTAEMLEVHLINAVAPFILVGKLKPLMLRDRSSPGHVVNVSAME HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEC GSFSRGTKTDKHPHTNMAKAALNMMTLTSAPDYARDNIYMNAVDTGWVTDEDPAQHAERK CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH VQELDFQPPLDIVDGAARVVDPIIASENSGEYVWGNFFKDYRHTAW HHHCCCCCCHHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA