Click here to switch to the map view.

The map label for this gene is yobV [H]

Identifier: 108763129

GI number: 108763129

Start: 2972707

End: 2973684

Strand: Reverse

Name: yobV [H]

Synonym: MXAN_2553

Alternate gene names: 108763129

Gene position: 2973684-2972707 (Counterclockwise)

Preceding gene: 108760624

Following gene: 108757749

Centisome position: 32.54

GC content: 68.1

Gene sequence:

>978_bases
ATGCGCGCCGACCGACTCGTCAGTTTGACGCTGCTCCTCCAGACACGCCCGAAGATGACGGCGGGCGAGCTGGCAAGGGA
GCTCGAGGTCTCCGAACGGACCATCCACCGGGACCTCGACGCGCTCTCCGGCGCGGGCGTGCCCGTGTACGCCACCCGAG
GCTCCGCGGGCGGCGTGGCGTTGATGGAAGGCTGGCGTACCCAACTCACGGGCTTCACCCGGGCGGAGCTGCATGCACTG
GCGGCCGTGGCGGCACCGGGGGCCCTGGATGACCTGGGCCTGACGTCGGCGCTGCGTTCGGGGCTGGTGAAGATGGCGGC
CTCCCTGCCCGCACTCCAGCAACCCGCGCTGGAGTACGCACGCCAGCGGCTTCACGTGGATGCGTCCTCGTGGTTTCCAG
AACGCGAGGCCGTGCCTCATCTGGCGACGCTGCGCGACGCGGTCTGGCAGGACCGCCGCGTGTCCCTGACGTACCGGGAC
TTCGAAGGCAAGCCGAGCCGCAAGGTGGTGGACCCGTACGCGCTCGTCATCAAGGCGGACCGTTGGTACCTCGTCGCGAG
CACGGGCGAGGATGAACCGCGTGTGTATCGAGGCTCGCGTGTGGACGGTGCACGGATACGCCCGGAGACCTTCATCCGGC
CGGCGCGCTTCGACCTGCCCGCATTCTGGAAGGCGTGGTGCTCACGCTTCGCGGAGAAGCGCGCGCAGTACGAGGTCACG
CTGCGCTTGACTCCGGAGGCGCTGGAGGCGCTGCGGAAGATTCGGCCGCGAGCGGAGGGTGCACGGCTTGATTCCGCGCC
GTGCTCAGCGGATGGGCGCAAGACAGTGGTTGTGGACTTCGAGCGAGAAGCGATTGCCTTCAGTCAGCTCTGCGACGTCG
GCTCGGAATTCGAGGTGCTCGCGCCGGAAGCACTGCGAACGAAGCTCCTGAAACTGGCGACGGGCATCCTCGACACGCAT
CGAAGTGCCACTCCTTGA

Upstream 100 bases:

>100_bases
CGACCGTGGACCGCAGTGGGTTCGTGTTCGCACCCTAGGCGGGGAATCCTGACATCCCCTGTCATGATTCCCCGCCTAGA
CTTCGCTTTGAGACCTGCCC

Downstream 100 bases:

>100_bases
CGCATGGCCTGGCGAAGCTTGCGCTGTTGGGTAAGCCTCGCAGGAACTACGCGGGCACTTCATTTTGCACGCCCTTTCTT
AGACAATCGAACGAGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRADRLVSLTLLLQTRPKMTAGELARELEVSERTIHRDLDALSGAGVPVYATRGSAGGVALMEGWRTQLTGFTRAELHAL
AAVAAPGALDDLGLTSALRSGLVKMAASLPALQQPALEYARQRLHVDASSWFPEREAVPHLATLRDAVWQDRRVSLTYRD
FEGKPSRKVVDPYALVIKADRWYLVASTGEDEPRVYRGSRVDGARIRPETFIRPARFDLPAFWKAWCSRFAEKRAQYEVT
LRLTPEALEALRKIRPRAEGARLDSAPCSADGRKTVVVDFEREAIAFSQLCDVGSEFEVLAPEALRTKLLKLATGILDTH
RSATP

Sequences:

>Translated_325_residues
MRADRLVSLTLLLQTRPKMTAGELARELEVSERTIHRDLDALSGAGVPVYATRGSAGGVALMEGWRTQLTGFTRAELHAL
AAVAAPGALDDLGLTSALRSGLVKMAASLPALQQPALEYARQRLHVDASSWFPEREAVPHLATLRDAVWQDRRVSLTYRD
FEGKPSRKVVDPYALVIKADRWYLVASTGEDEPRVYRGSRVDGARIRPETFIRPARFDLPAFWKAWCSRFAEKRAQYEVT
LRLTPEALEALRKIRPRAEGARLDSAPCSADGRKTVVVDFEREAIAFSQLCDVGSEFEVLAPEALRTKLLKLATGILDTH
RSATP
>Mature_325_residues
MRADRLVSLTLLLQTRPKMTAGELARELEVSERTIHRDLDALSGAGVPVYATRGSAGGVALMEGWRTQLTGFTRAELHAL
AAVAAPGALDDLGLTSALRSGLVKMAASLPALQQPALEYARQRLHVDASSWFPEREAVPHLATLRDAVWQDRRVSLTYRD
FEGKPSRKVVDPYALVIKADRWYLVASTGEDEPRVYRGSRVDGARIRPETFIRPARFDLPAFWKAWCSRFAEKRAQYEVT
LRLTPEALEALRKIRPRAEGARLDSAPCSADGRKTVVVDFEREAIAFSQLCDVGSEFEVLAPEALRTKLLKLATGILDTH
RSATP

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36017; Mature: 36017

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADRLVSLTLLLQTRPKMTAGELARELEVSERTIHRDLDALSGAGVPVYATRGSAGGVA
CCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
LMEGWRTQLTGFTRAELHALAAVAAPGALDDLGLTSALRSGLVKMAASLPALQQPALEYA
HHHCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQRLHVDASSWFPEREAVPHLATLRDAVWQDRRVSLTYRDFEGKPSRKVVDPYALVIKAD
HHHHCCCHHHCCCCHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCEEEEEECC
RWYLVASTGEDEPRVYRGSRVDGARIRPETFIRPARFDLPAFWKAWCSRFAEKRAQYEVT
CEEEEEECCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEE
LRLTPEALEALRKIRPRAEGARLDSAPCSADGRKTVVVDFEREAIAFSQLCDVGSEFEVL
EEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEE
APEALRTKLLKLATGILDTHRSATP
CHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRADRLVSLTLLLQTRPKMTAGELARELEVSERTIHRDLDALSGAGVPVYATRGSAGGVA
CCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
LMEGWRTQLTGFTRAELHALAAVAAPGALDDLGLTSALRSGLVKMAASLPALQQPALEYA
HHHCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQRLHVDASSWFPEREAVPHLATLRDAVWQDRRVSLTYRDFEGKPSRKVVDPYALVIKAD
HHHHCCCHHHCCCCHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCEEEEEECC
RWYLVASTGEDEPRVYRGSRVDGARIRPETFIRPARFDLPAFWKAWCSRFAEKRAQYEVT
CEEEEEECCCCCCCEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEE
LRLTPEALEALRKIRPRAEGARLDSAPCSADGRKTVVVDFEREAIAFSQLCDVGSEFEVL
EEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEE
APEALRTKLLKLATGILDTHRSATP
CHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]