| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cysI
Identifier: 108763120
GI number: 108763120
Start: 2712415
End: 2714103
Strand: Reverse
Name: cysI
Synonym: MXAN_2334
Alternate gene names: 108763120
Gene position: 2714103-2712415 (Counterclockwise)
Preceding gene: 108761948
Following gene: 108760971
Centisome position: 29.7
GC content: 69.15
Gene sequence:
>1689_bases ATGAGCCACCAGCCCAAGCCTCTCTCCGAAGTGGAGCACATCAAGACCCAGAGCCGCCTGCTCCGGGGAAGTCTGGCGGA GAGCCTGGAGGACCCGGTGACGGGCGGCCTCGCCACGCCGGACACCAACCTCATCAAGTTCCACGGCAGCTATCAGCAGG ACGACCGCGACGTGCGCGAGGAGCGGCGTCAGCAGAAGCTGGAGCCCGACTACAGCTTCATGCTCCGCACCCGCCTGCCT GGAGGCGTGTGCACACCGGCCCAGTGGCTGGTGATGGACGCCCTGGCGCGCGAGCACGCCAACCACACGCTGCGCATCAC CACGCGGCAGGCCTTTCAGTTACACGGCGTCATCAAGGATGACCTCCGGCCCACCATCGCCCGCATCAACGAAGCGATGA TGGACACGCTGGCCGCCTGCGGCGACGTGAACCGCAACGTGCTGTGCAACCCCAATCCGGTGGACTCGCGCGTCCACGAG ACGGTGTACCAGTGGGCGGTGCGCATCTCCGAGCACCTGCTGCCGAAGACGCGCGCCTACTACGAAGTCTGGCTGGGGAA GGAGAAGGTGGCCGGCGGTGAGGACGAGCCCATCTACGGCGCCACGTACCTGCCCCGGAAGTTCAAGGCCGCCGTGGCGG TGCCGCCCCTCAACGACGTGGATGTCTTCGCGCAGGACCTGGGCTTCATCGCCATCATCGAAGGCGACGCGCTCGTGGGC TTCAACGTCTCCGTGGGCGGCGGCATGGGCGCCACGCATGGTGACGCGGCCACCTATCCCCGGCTGGCGGACGTCGTCGG CTTCATCCCGCCGGAGCAGACGCTCGCCGTCGCCGAGGAGGTGGTGAAGATTCACCGCGACTTCGGGGACCGCACCAACC GCAAGCACGCGCGCCTGAAGTACGTCCTGGAGGAGCGCGGCGTTCCCTGGTTCACGGCAGAGCTGGAGAAGCGGCTCGGC TTCCCGCTCCAGCCAGCGCGCCCCTTCGCTTTCGAGCACAACGGAGACCGCTTCGGGTGGACAGAGGGCCATGACGGCCG GTGGCATCTGACGTTGCACCTGGACAGCGGCCGCGTGGCGGACCGGCCCGGCGCGCCGCACTTGACGGGCCTGCGGGAGA TTGCGCGCATCCACACCGGGGACTTCCGGCTCACGGCGAACCAGAACCTCGTCATCGCAGGTGTGACGCCCGAGGCTCGC GACGCCATCGGCGCGCTGGTGACGGCGCACGCGCTGGACAGCTTCCGCAGCGCCAGCCCGGTGCGTCGCAACGCGCTGGC GTGCGTGGCGCTGCCGACGTGCGGGCTCGCCATGGCGGAGGCGGAGCGCTACCTGCCTACCTTCGTGGGACGGCTGGAGG ACCGGCTGCGGGCGCATGGCCTGCAGGACGCCAACCTGCTGCTCCGCATCACCGGGTGCCCCAACGGCTGCGCGAGGCCG TACCTGGCGGAGGTGGGACTCGTGGGCAAGGCGCCGGGCCGCTACAACCTGCACCTGGGCGGAGATGCGCGAGGCCAGCG CCTCAGTCACCTCTACAGGGAGAACATCGACGAGGACGCCATCCTCGCCGCGCTGGAGCCATTGTTCGAAGGCTACGCAC GCGAACGTCAGCCCGGTGAAGGCTTTGGCGACTTCGTGGTGCGCGCTGGCCACGTCCCCAGCCCAGCCGTTCAGCCTCGG CCGTCCTGA
Upstream 100 bases:
>100_bases CAAGAGCCGCGAGGACGCGCACGCCTGGCTCGAATCCCTGCGCGAGCAGCGGCGCTACCTGCGCGACGTCTACTGACCCA TTCCGATTGCGAGCAACGAC
Downstream 100 bases:
>100_bases GCCAACGCGGACCACGCGCGTGTTCAATCACTCGCGCCCCGCACCGCGGTGAGGAGCAGGTCGTACTTGCCGCCCAGGAA CGTACGGAAGCCGTGCTGGT
Product: sulfite reductase subunit beta
Products: NA
Alternate protein names: SiR-HP; SiRHP
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSHQPKPLSEVEHIKTQSRLLRGSLAESLEDPVTGGLATPDTNLIKFHGSYQQDDRDVREERRQQKLEPDYSFMLRTRLP GGVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKDDLRPTIARINEAMMDTLAACGDVNRNVLCNPNPVDSRVHE TVYQWAVRISEHLLPKTRAYYEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVG FNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLKYVLEERGVPWFTAELEKRLG FPLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVADRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEAR DAIGALVTAHALDSFRSASPVRRNALACVALPTCGLAMAEAERYLPTFVGRLEDRLRAHGLQDANLLLRITGCPNGCARP YLAEVGLVGKAPGRYNLHLGGDARGQRLSHLYRENIDEDAILAALEPLFEGYARERQPGEGFGDFVVRAGHVPSPAVQPR PS
Sequences:
>Translated_562_residues MSHQPKPLSEVEHIKTQSRLLRGSLAESLEDPVTGGLATPDTNLIKFHGSYQQDDRDVREERRQQKLEPDYSFMLRTRLP GGVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKDDLRPTIARINEAMMDTLAACGDVNRNVLCNPNPVDSRVHE TVYQWAVRISEHLLPKTRAYYEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVG FNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLKYVLEERGVPWFTAELEKRLG FPLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVADRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEAR DAIGALVTAHALDSFRSASPVRRNALACVALPTCGLAMAEAERYLPTFVGRLEDRLRAHGLQDANLLLRITGCPNGCARP YLAEVGLVGKAPGRYNLHLGGDARGQRLSHLYRENIDEDAILAALEPLFEGYARERQPGEGFGDFVVRAGHVPSPAVQPR PS >Mature_561_residues SHQPKPLSEVEHIKTQSRLLRGSLAESLEDPVTGGLATPDTNLIKFHGSYQQDDRDVREERRQQKLEPDYSFMLRTRLPG GVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKDDLRPTIARINEAMMDTLAACGDVNRNVLCNPNPVDSRVHET VYQWAVRISEHLLPKTRAYYEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVGF NVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLKYVLEERGVPWFTAELEKRLGF PLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVADRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEARD AIGALVTAHALDSFRSASPVRRNALACVALPTCGLAMAEAERYLPTFVGRLEDRLRAHGLQDANLLLRITGCPNGCARPY LAEVGLVGKAPGRYNLHLGGDARGQRLSHLYRENIDEDAILAALEPLFEGYARERQPGEGFGDFVVRAGHVPSPAVQPRP S
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Homologues:
Organism=Escherichia coli, GI1789122, Length=553, Percent_Identity=52.0795660036166, Blast_Score=610, Evalue=1e-176, Organism=Saccharomyces cerevisiae, GI6322597, Length=583, Percent_Identity=46.3121783876501, Blast_Score=548, Evalue=1e-157,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): CYSI_MYXXD (Q1D9W9)
Other databases:
- EMBL: CP000113 - RefSeq: YP_630554.1 - ProteinModelPortal: Q1D9W9 - SMR: Q1D9W9 - STRING: Q1D9W9 - GeneID: 4106874 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_2334 - TIGR: MXAN_2334 - eggNOG: COG0155 - HOGENOM: HBG626671 - OMA: ESERVFP - PhylomeDB: Q1D9W9 - ProtClustDB: PRK13504 - BioCyc: MXAN246197:MXAN_2334-MONOMER - HAMAP: MF_01540 - InterPro: IPR011786 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 - PRINTS: PR00397 - TIGRFAMs: TIGR02041
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; SSF55124 NiR_SiRalpha_1/3
EC number: =1.8.1.2
Molecular weight: Translated: 62087; Mature: 61956
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQPKPLSEVEHIKTQSRLLRGSLAESLEDPVTGGLATPDTNLIKFHGSYQQDDRDVRE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHH ERRQQKLEPDYSFMLRTRLPGGVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKD HHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCHHH DLRPTIARINEAMMDTLAACGDVNRNVLCNPNPVDSRVHETVYQWAVRISEHLLPKTRAY HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH YEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVG HHHHCCCHHCCCCCCCCCCCCCCCCHHHCCEEECCCCCHHHHHHHCCCEEEEEECCEEEE FNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLK EEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YVLEERGVPWFTAELEKRLGFPLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVA HHHHHCCCCEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCC DRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEARDAIGALVTAHALDSFRSASP CCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC VRRNALACVALPTCGLAMAEAERYLPTFVGRLEDRLRAHGLQDANLLLRITGCPNGCARP HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC YLAEVGLVGKAPGRYNLHLGGDARGQRLSHLYRENIDEDAILAALEPLFEGYARERQPGE HHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC GFGDFVVRAGHVPSPAVQPRPS CCHHHHEECCCCCCCCCCCCCC >Mature Secondary Structure SHQPKPLSEVEHIKTQSRLLRGSLAESLEDPVTGGLATPDTNLIKFHGSYQQDDRDVRE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHH ERRQQKLEPDYSFMLRTRLPGGVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKD HHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCHHH DLRPTIARINEAMMDTLAACGDVNRNVLCNPNPVDSRVHETVYQWAVRISEHLLPKTRAY HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH YEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVG HHHHCCCHHCCCCCCCCCCCCCCCCHHHCCEEECCCCCHHHHHHHCCCEEEEEECCEEEE FNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLK EEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YVLEERGVPWFTAELEKRLGFPLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVA HHHHHCCCCEEHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCC DRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEARDAIGALVTAHALDSFRSASP CCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC VRRNALACVALPTCGLAMAEAERYLPTFVGRLEDRLRAHGLQDANLLLRITGCPNGCARP HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC YLAEVGLVGKAPGRYNLHLGGDARGQRLSHLYRENIDEDAILAALEPLFEGYARERQPGE HHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC GFGDFVVRAGHVPSPAVQPRPS CCHHHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA