Click here to switch to the map view.

The map label for this gene is pqqL [C]

Identifier: 108763119

GI number: 108763119

Start: 4428765

End: 4430204

Strand: Direct

Name: pqqL [C]

Synonym: MXAN_3713

Alternate gene names: 108763119

Gene position: 4428765-4430204 (Clockwise)

Preceding gene: 108758171

Following gene: 108759188

Centisome position: 48.46

GC content: 69.38

Gene sequence:

>1440_bases
ATGGCTTCTCGCAAGAGCCCCTCCCGAAAGTCCCCCGCACGTCCGGCGAAGCGCGCCGGCGGCAAGGCCCCCGTCGCTCG
CAAGGCTTCGCCGAAGCGCGGCGCGCCCCGCGCCACGACGAGCGCCCTCACGCTTCCCACGTTGCACGAAAGCACCACGT
CCAGTGGCCTGAAGGTCATCGCCGCCGAGCGCGGGCCCCTGCCCATGGTGTCCGTGCGGCTGGTGATTCGCGCGGGCAGC
GCCACCGACCCGGATGGCAAGCACGGCCTGGCGGACTTCACCGCCCGGTTGCTGCGCCGGGGCACCCGCCTGCTGAACGC
GCAGGCCATCGACGAAGCGGTGGAGTTCGTCGGTGCCAGCCTGGGCGTGGGTGTGAGTGAAGACACGCTGTCGGTGGCCC
TCACCACACCGTCCGAGCACTTCGTACAGATGCTCGACATCCTGGGCCAGTTGGTGCGCGAGCCCACGTTCCCGCAGTCC
GAAGTGGACGATGCGCGCGAGCGCGAGCTGGCGCAGTTCGCCAATGACCTGGACGACCCGTCCATCATCGCCGACCGCGC
CATGGTCCGCGCGCTCTGGGGCAACCACCCCTACGGCCACGACGTGGGCGGTTCGTCGAAGAGCGTGAAGACCTTCACGC
GCGATGACGTGGTGCGCTTCCACCAGGAGCGCATGGGCCCCAAGGTGTCCATGCTCATCGTGGTGGGCGCGGTGGATCCG
CAGCGTGTGGCTGCCGCGGCGGAAGACGCCTTCGCTGATTGGACGGGAGGACCGGATGCGCCCGTGGCCATTCCCGCGCC
GGAGCGCATTGCCCTGGGTGGGCGGGTCATCATCGTGGACAAGCCGGACCAGACGCAGTCGCAGGTTCGGCTGGGCGGCC
CCGGCATGCGCATGGGCCACGAGGACTATTTCCCGGCCACGGCGATGAACATCGCCCTGGGCGGTGGATTCACCTCGCGC
CTGATGAACGAGATTCGCGTCAACCGCGGCCTCACGTACGGCGTCAGCTCGTGGTTCGACTCGATGAACGCGGCCGGCGT
CTTCGCGCTGTCCACCTTCACGAAGACGGAGTCCACGCGCGAAATCATCGACGTGGCGCTGGCGGAGATTGGCGGCGTCC
GGGAGAAGGGGCTCAAGCCCCGCGAGCTGGCGGATGCCCAGGCCTACCTCGCCGGCCTGTACCCGCTGCGGACGGAGACG
AACGAGTCCATTGCCGGAAGCATCGCCGAGGCCCGCCTGCACGGGCTGGGGGATGACTGGGTGGAGCGGTTCCGGGACCG
GCTGCGCGCGGTGACGCCGAAGCAAGTCGTGGCCGCCGCGAAGAAATACTGCTTCGCGCAGGCGCCCGCCGTGGTGGTGC
TGGGCAAGGCGGACGCGGTGAAGAAGCAGCTCAAGGGCCTGGGTCCCATCACCGTGGTGCCGGCGTCGGAGTACGAGTGA

Upstream 100 bases:

>100_bases
TGGCCGCGAAGTACTTCGCGCCCGAGCACCGCTCCGTGGTGACGCTGGTTCCCGCGCCCACCGAAGCCTGAGCCCGGTCC
GTACAAGGAAACCTTCCGAT

Downstream 100 bases:

>100_bases
CAGACGTCCGCATCCTCTTCGAGGGCGGCGGCGTGCTCGTGGTGGACAAGCCGCCCGGGATGCTCGTCATTCCCGGGCGC
GAAGGCGGCCCCTCGCTGCG

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MASRKSPSRKSPARPAKRAGGKAPVARKASPKRGAPRATTSALTLPTLHESTTSSGLKVIAAERGPLPMVSVRLVIRAGS
ATDPDGKHGLADFTARLLRRGTRLLNAQAIDEAVEFVGASLGVGVSEDTLSVALTTPSEHFVQMLDILGQLVREPTFPQS
EVDDARERELAQFANDLDDPSIIADRAMVRALWGNHPYGHDVGGSSKSVKTFTRDDVVRFHQERMGPKVSMLIVVGAVDP
QRVAAAAEDAFADWTGGPDAPVAIPAPERIALGGRVIIVDKPDQTQSQVRLGGPGMRMGHEDYFPATAMNIALGGGFTSR
LMNEIRVNRGLTYGVSSWFDSMNAAGVFALSTFTKTESTREIIDVALAEIGGVREKGLKPRELADAQAYLAGLYPLRTET
NESIAGSIAEARLHGLGDDWVERFRDRLRAVTPKQVVAAAKKYCFAQAPAVVVLGKADAVKKQLKGLGPITVVPASEYE

Sequences:

>Translated_479_residues
MASRKSPSRKSPARPAKRAGGKAPVARKASPKRGAPRATTSALTLPTLHESTTSSGLKVIAAERGPLPMVSVRLVIRAGS
ATDPDGKHGLADFTARLLRRGTRLLNAQAIDEAVEFVGASLGVGVSEDTLSVALTTPSEHFVQMLDILGQLVREPTFPQS
EVDDARERELAQFANDLDDPSIIADRAMVRALWGNHPYGHDVGGSSKSVKTFTRDDVVRFHQERMGPKVSMLIVVGAVDP
QRVAAAAEDAFADWTGGPDAPVAIPAPERIALGGRVIIVDKPDQTQSQVRLGGPGMRMGHEDYFPATAMNIALGGGFTSR
LMNEIRVNRGLTYGVSSWFDSMNAAGVFALSTFTKTESTREIIDVALAEIGGVREKGLKPRELADAQAYLAGLYPLRTET
NESIAGSIAEARLHGLGDDWVERFRDRLRAVTPKQVVAAAKKYCFAQAPAVVVLGKADAVKKQLKGLGPITVVPASEYE
>Mature_478_residues
ASRKSPSRKSPARPAKRAGGKAPVARKASPKRGAPRATTSALTLPTLHESTTSSGLKVIAAERGPLPMVSVRLVIRAGSA
TDPDGKHGLADFTARLLRRGTRLLNAQAIDEAVEFVGASLGVGVSEDTLSVALTTPSEHFVQMLDILGQLVREPTFPQSE
VDDARERELAQFANDLDDPSIIADRAMVRALWGNHPYGHDVGGSSKSVKTFTRDDVVRFHQERMGPKVSMLIVVGAVDPQ
RVAAAAEDAFADWTGGPDAPVAIPAPERIALGGRVIIVDKPDQTQSQVRLGGPGMRMGHEDYFPATAMNIALGGGFTSRL
MNEIRVNRGLTYGVSSWFDSMNAAGVFALSTFTKTESTREIIDVALAEIGGVREKGLKPRELADAQAYLAGLYPLRTETN
ESIAGSIAEARLHGLGDDWVERFRDRLRAVTPKQVVAAAKKYCFAQAPAVVVLGKADAVKKQLKGLGPITVVPASEYE

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=435, Percent_Identity=20.6896551724138, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 51171; Mature: 51040

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRKSPSRKSPARPAKRAGGKAPVARKASPKRGAPRATTSALTLPTLHESTTSSGLKVI
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE
AAERGPLPMVSVRLVIRAGSATDPDGKHGLADFTARLLRRGTRLLNAQAIDEAVEFVGAS
EECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVGVSEDTLSVALTTPSEHFVQMLDILGQLVREPTFPQSEVDDARERELAQFANDLDDP
HCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH
SIIADRAMVRALWGNHPYGHDVGGSSKSVKTFTRDDVVRFHQERMGPKVSMLIVVGAVDP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCH
QRVAAAAEDAFADWTGGPDAPVAIPAPERIALGGRVIIVDKPDQTQSQVRLGGPGMRMGH
HHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCEEEEEECCCCCHHHEEECCCCCCCCC
EDYFPATAMNIALGGGFTSRLMNEIRVNRGLTYGVSSWFDSMNAAGVFALSTFTKTESTR
CCCCCHHHHEEEECCCHHHHHHHHHHHHCCCEECHHHHHHCCCCCCEEEEEHHHHCHHHH
EIIDVALAEIGGVREKGLKPRELADAQAYLAGLYPLRTETNESIAGSIAEARLHGLGDDW
HHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHH
VERFRDRLRAVTPKQVVAAAKKYCFAQAPAVVVLGKADAVKKQLKGLGPITVVPASEYE
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure 
ASRKSPSRKSPARPAKRAGGKAPVARKASPKRGAPRATTSALTLPTLHESTTSSGLKVI
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE
AAERGPLPMVSVRLVIRAGSATDPDGKHGLADFTARLLRRGTRLLNAQAIDEAVEFVGAS
EECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVGVSEDTLSVALTTPSEHFVQMLDILGQLVREPTFPQSEVDDARERELAQFANDLDDP
HCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH
SIIADRAMVRALWGNHPYGHDVGGSSKSVKTFTRDDVVRFHQERMGPKVSMLIVVGAVDP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCH
QRVAAAAEDAFADWTGGPDAPVAIPAPERIALGGRVIIVDKPDQTQSQVRLGGPGMRMGH
HHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCEEEEEECCCCCHHHEEECCCCCCCCC
EDYFPATAMNIALGGGFTSRLMNEIRVNRGLTYGVSSWFDSMNAAGVFALSTFTKTESTR
CCCCCHHHHEEEECCCHHHHHHHHHHHHCCCEECHHHHHHCCCCCCEEEEEHHHHCHHHH
EIIDVALAEIGGVREKGLKPRELADAQAYLAGLYPLRTETNESIAGSIAEARLHGLGDDW
HHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHH
VERFRDRLRAVTPKQVVAAAKKYCFAQAPAVVVLGKADAVKKQLKGLGPITVVPASEYE
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]