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The map label for this gene is rhaS [C]

Identifier: 108762911

GI number: 108762911

Start: 729488

End: 730261

Strand: Reverse

Name: rhaS [C]

Synonym: MXAN_0631

Alternate gene names: 108762911

Gene position: 730261-729488 (Counterclockwise)

Preceding gene: 108762464

Following gene: 108757045

Centisome position: 7.99

GC content: 70.8

Gene sequence:

>774_bases
GTGCGCCGGCTCGTCCAGGTGCTGGACGTGGAGTTGTCCCCCGCCAAGCCGCATGCCTCGCTGGTGGACGCGCGCCGGCT
GGAGGCCGCGGACCCCATGGCCTTTGCCGCCCTGGTCAAATACATGCAGCCCCGCGAGAAGGACTTCAGTACCTCCGTGC
TGAAGCAGGCGCTGGTGCGGCCGGAAGGCGTGGTGGGCGCGGTGGTGGGCGGCTTCTACACGCTGCTGTCCGGGGCCTAT
CCCAGCCGGGCATTCACCGCTCCCGACACCGCCCTTCAGTGGTTGGGGCAGCCGGAGGCCGAGGCCGCGGCGCTGCTGGC
GGAGCTCAACGGACTGGTCGCGGAGGCCACCGGCCAGTCTCCCCTGCTGCGCGAGCTGCACCAGGTGATGCGAGGCCGGC
TGCCGGAGGTGAATCTGTCGGACGTGGCCCGGGAGATGGGCATGTCCGAACGGACGCTGCAACGCCGGCTGAAGGAGGCC
AGCACGTCCTTCCAGGCGGAGCTCAACGCGGTGCAGGTGCGCATGGCGCAGTCGCTGCTTCGCGAGTCGAACATGAAGCT
CACCGCAGTGGCGGTGGAGGTGGGCTGCGCCTCGCTCCAGCACTTCAGCAGCCTCTTCCGCAAGCTGGTGGGCGAGTCCC
CCAGCGCGTGGCGGGACCGGCAGAAGCAGCCGCAGGGCGACGGCACGCCACCACCCGCCGAGGCCCTGATGGAGGAAGTG
GCTGGAGCGCCCGGTAAGGGCCCCGTCGCGGCCACGTCCGAAGTCCCCGAGTAG

Upstream 100 bases:

>100_bases
CCCCCACGGCCGTTACCTAGTCGGGGAGGGCTTCCTCCACTGGTACGCCTCGGTGGACCTGTGCGGCTTCATCCTCTGGG
GACGCCCCGGAGAGGCCGAG

Downstream 100 bases:

>100_bases
TCACGCCCTGGAGCCGGGAAGCCGCTGGCTCCCGGCAATCCCTGCCAGTCACCACAGGCGCTCAACATTCCCAAACGTTG
TCAGGCGGGACTGCGCGACT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRRLVQVLDVELSPAKPHASLVDARRLEAADPMAFAALVKYMQPREKDFSTSVLKQALVRPEGVVGAVVGGFYTLLSGAY
PSRAFTAPDTALQWLGQPEAEAAALLAELNGLVAEATGQSPLLRELHQVMRGRLPEVNLSDVAREMGMSERTLQRRLKEA
STSFQAELNAVQVRMAQSLLRESNMKLTAVAVEVGCASLQHFSSLFRKLVGESPSAWRDRQKQPQGDGTPPPAEALMEEV
AGAPGKGPVAATSEVPE

Sequences:

>Translated_257_residues
MRRLVQVLDVELSPAKPHASLVDARRLEAADPMAFAALVKYMQPREKDFSTSVLKQALVRPEGVVGAVVGGFYTLLSGAY
PSRAFTAPDTALQWLGQPEAEAAALLAELNGLVAEATGQSPLLRELHQVMRGRLPEVNLSDVAREMGMSERTLQRRLKEA
STSFQAELNAVQVRMAQSLLRESNMKLTAVAVEVGCASLQHFSSLFRKLVGESPSAWRDRQKQPQGDGTPPPAEALMEEV
AGAPGKGPVAATSEVPE
>Mature_257_residues
MRRLVQVLDVELSPAKPHASLVDARRLEAADPMAFAALVKYMQPREKDFSTSVLKQALVRPEGVVGAVVGGFYTLLSGAY
PSRAFTAPDTALQWLGQPEAEAAALLAELNGLVAEATGQSPLLRELHQVMRGRLPEVNLSDVAREMGMSERTLQRRLKEA
STSFQAELNAVQVRMAQSLLRESNMKLTAVAVEVGCASLQHFSSLFRKLVGESPSAWRDRQKQPQGDGTPPPAEALMEEV
AGAPGKGPVAATSEVPE

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27696; Mature: 27696

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLVQVLDVELSPAKPHASLVDARRLEAADPMAFAALVKYMQPREKDFSTSVLKQALVR
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
PEGVVGAVVGGFYTLLSGAYPSRAFTAPDTALQWLGQPEAEAAALLAELNGLVAEATGQS
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PLLRELHQVMRGRLPEVNLSDVAREMGMSERTLQRRLKEASTSFQAELNAVQVRMAQSLL
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RESNMKLTAVAVEVGCASLQHFSSLFRKLVGESPSAWRDRQKQPQGDGTPPPAEALMEEV
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH
AGAPGKGPVAATSEVPE
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLVQVLDVELSPAKPHASLVDARRLEAADPMAFAALVKYMQPREKDFSTSVLKQALVR
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
PEGVVGAVVGGFYTLLSGAYPSRAFTAPDTALQWLGQPEAEAAALLAELNGLVAEATGQS
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PLLRELHQVMRGRLPEVNLSDVAREMGMSERTLQRRLKEASTSFQAELNAVQVRMAQSLL
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RESNMKLTAVAVEVGCASLQHFSSLFRKLVGESPSAWRDRQKQPQGDGTPPPAEALMEEV
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH
AGAPGKGPVAATSEVPE
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA