| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762859
Identifier: 108762859
GI number: 108762859
Start: 5387898
End: 5388725
Strand: Reverse
Name: 108762859
Synonym: MXAN_4384
Alternate gene names: NA
Gene position: 5388725-5387898 (Counterclockwise)
Preceding gene: 108756898
Following gene: 108762501
Centisome position: 58.96
GC content: 71.26
Gene sequence:
>828_bases ATGAGCACGCCCATGGTCATCACCGCGGCCATGGTGGGCGCGGAGACGACGCGCGAGCAGACGCCGCACCTGCCCATCAC CGCGGAGGAGATCGCCGAGGACGCCGCGCGTTGCCGCGAGGCCGGCGCGGCGATGGTGCACCTGCACGTGCGCACGCCGG ACGGCAAGCCGTCGCAGGACGCGGAGTTGTTCCGCGCGGCCATCCGCGCCATCCGCAAGCGCACGGACGTGCTCATCCAG ACGTCCACGGGCGGCGCGGTGGGCATGACGGTGGACCAGCGCTGCGGGCCGCTGACGCTCACCGGCGAGGACCGGCCGGA CATGGCCACCTTGACGACGGGCACGGTGAACTTCGGCGAGGAGGTCTTCTGGAATCCCCGGCCGCTCGTGCGTGACATCG CCCGGCGCATCCGGGCGATTGGCCTGCGGCCGGAGCTGGAGTGCTTCGACGTGGGCATGATTGACGAGGCCCGCTACCTG GCGAAGGAAGGGCTGGTGGACCTGCCAGCGCACTTCGACTTCGTGCTCGGCGTGCCGGGCACGTTGCAGCCGCGTCCGGA GGTGCTGGACTTCATGATTGCCTCGCTGCCGGAGGGCTCCACCTGGACGGTGGCCGGCGTGGGGCGTCACCAGCTGGCCT ACGTGGACGAGGCGGCGAAGCGGGGCGGCAACGCGCGCGTGGGCCTGGAGGACAACATCTACGTGTCCAAGGGCGTGCTC GCGAAGGGCAACTGGGAGCTCGTCGCAGAGGCGGCGAAGCGCGCGCGTGCCCATGGCCGCGAGCCCGCCACGCCGGAGCA GGCGCGCAAGTTGTTGCGGTTGTCGTAA
Upstream 100 bases:
>100_bases ACGTGAATGACTCGGCGGCGGACGTCCTGGCGGAGCCGGTGGTGGTGTGCCGGGCCACGGGGACGTGTGTGGTGCCCAAG GACAAGCAGCGGGGGCAGAC
Downstream 100 bases:
>100_bases GCACCGCCAGATGCATCGCGACGGCCGCCGCCCGAGTCCTGTCGGGCGGCGCCCGTCTCTGGGGTGTGAGGGCTGGTTCT TGTTGCCATGCGCCCGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSTPMVITAAMVGAETTREQTPHLPITAEEIAEDAARCREAGAAMVHLHVRTPDGKPSQDAELFRAAIRAIRKRTDVLIQ TSTGGAVGMTVDQRCGPLTLTGEDRPDMATLTTGTVNFGEEVFWNPRPLVRDIARRIRAIGLRPELECFDVGMIDEARYL AKEGLVDLPAHFDFVLGVPGTLQPRPEVLDFMIASLPEGSTWTVAGVGRHQLAYVDEAAKRGGNARVGLEDNIYVSKGVL AKGNWELVAEAAKRARAHGREPATPEQARKLLRLS
Sequences:
>Translated_275_residues MSTPMVITAAMVGAETTREQTPHLPITAEEIAEDAARCREAGAAMVHLHVRTPDGKPSQDAELFRAAIRAIRKRTDVLIQ TSTGGAVGMTVDQRCGPLTLTGEDRPDMATLTTGTVNFGEEVFWNPRPLVRDIARRIRAIGLRPELECFDVGMIDEARYL AKEGLVDLPAHFDFVLGVPGTLQPRPEVLDFMIASLPEGSTWTVAGVGRHQLAYVDEAAKRGGNARVGLEDNIYVSKGVL AKGNWELVAEAAKRARAHGREPATPEQARKLLRLS >Mature_274_residues STPMVITAAMVGAETTREQTPHLPITAEEIAEDAARCREAGAAMVHLHVRTPDGKPSQDAELFRAAIRAIRKRTDVLIQT STGGAVGMTVDQRCGPLTLTGEDRPDMATLTTGTVNFGEEVFWNPRPLVRDIARRIRAIGLRPELECFDVGMIDEARYLA KEGLVDLPAHFDFVLGVPGTLQPRPEVLDFMIASLPEGSTWTVAGVGRHQLAYVDEAAKRGGNARVGLEDNIYVSKGVLA KGNWELVAEAAKRARAHGREPATPEQARKLLRLS
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29895; Mature: 29763
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPMVITAAMVGAETTREQTPHLPITAEEIAEDAARCREAGAAMVHLHVRTPDGKPSQD CCCCEEEEHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHH AELFRAAIRAIRKRTDVLIQTSTGGAVGMTVDQRCGPLTLTGEDRPDMATLTTGTVNFGE HHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCEEECCCCCCCEEEEEECCCCCCH EVFWNPRPLVRDIARRIRAIGLRPELECFDVGMIDEARYLAKEGLVDLPAHFDFVLGVPG HHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCEECCCCCEEEECCCC TLQPRPEVLDFMIASLPEGSTWTVAGVGRHQLAYVDEAAKRGGNARVGLEDNIYVSKGVL CCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCCCCEEEECCEE AKGNWELVAEAAKRARAHGREPATPEQARKLLRLS ECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure STPMVITAAMVGAETTREQTPHLPITAEEIAEDAARCREAGAAMVHLHVRTPDGKPSQD CCCEEEEHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHH AELFRAAIRAIRKRTDVLIQTSTGGAVGMTVDQRCGPLTLTGEDRPDMATLTTGTVNFGE HHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCEEECCCCCCCEEEEEECCCCCCH EVFWNPRPLVRDIARRIRAIGLRPELECFDVGMIDEARYLAKEGLVDLPAHFDFVLGVPG HHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCEECCCCCEEEECCCC TLQPRPEVLDFMIASLPEGSTWTVAGVGRHQLAYVDEAAKRGGNARVGLEDNIYVSKGVL CCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCCCCEEEECCEE AKGNWELVAEAAKRARAHGREPATPEQARKLLRLS ECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA