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The map label for this gene is glyS

Identifier: 108762825

GI number: 108762825

Start: 3632037

End: 3634148

Strand: Direct

Name: glyS

Synonym: MXAN_3101

Alternate gene names: 108762825

Gene position: 3632037-3634148 (Clockwise)

Preceding gene: 108763610

Following gene: 108762627

Centisome position: 39.74

GC content: 69.93

Gene sequence:

>2112_bases
ATGGCGCGTGACCTGCTCCTGGAAGTGGGCGCGGAAGAGATTCCGGCGTCCTTCATCGGCCCCGCACTGGATGACCTGAA
GCGCGTCATCACCGAGCGCATGGCGGATGCCCGCCTGAAGCACGGCGAGGTGCGGACCTTCGGCACGCCGCGGCGGCTCG
CGGTGTGGGTGAAGGACGTGGCGGACGCGGGCGAGGACATCATCAAGGAGGTGCTCGGCCCCAGCGCCAAGGCGGCCTTC
GACGCGCAGGGCAAGCCCACCAAGGCGGCGGAGAAGTTCGCCGAGAGCCTCAAGCTCGCGGTGGACCAGCTGGGCCGCGC
CACCACCGCCAAGGGCGAGTACCTGTCCGCGCGCGTGGAGGAGAAGGGCCGCCCGGCGGCGGACATCCTGAAGGACACGC
TGCACGCGGCGGTGCACGGCATCAACTTCCGCAAGTCCATGCGCTGGGGTGACGTGGACACGTCCTTCGCGCGCCCGGTT
CAGTGGCTGGTGGCGCTGCTGGGGAGCGATGTTCTGCCCGTGGTGTTCGGTGACGTGACGAGCGGCCGGACCACGCGGGG
GCACCGCTTCCTGTCGCCTGACGCCATCGAGCTGAAGGCTCCGGCGGAGTACGAGGTGGCGCTGGAGAAGGCGCACGTGG
TGGCGGACATCACGAAGCGCCGCGCGCAGTTGGTGGAGAAGGTGAGGGCGGCCGCGAGCAAGGCCGGAGCCCAACTGCTG
GAGGACGAGTCGCTGGTGGACCAGGTGACTAACCTGGTCGAGCTGCCCAGCCCGGTGGTGGGCACCTTCGAGGAGCGCCA
CCTGGACCTGCCCCCGGAGGTGCTGGTGCAGGAGATGAAGAGCCACCAGCGCTACTTCTCGCTGGTGGACAGCGCGGGCA
AGCTGCAGCCGAAGTTCATCGCCGTGTCCAACACGCCGGTGCGCGACGAGCAGCTCAGCCTGCGTGGCTACCAGCGCGTG
CTGCGCGCGCGACTGGCCGACGGACGCTTCTTCTTCGACGAGGACCGGAAGACGCCGCTCATCGACCGCGTGGAGAAGCT
GGGCCGCGTGGTGTGGCAGGGGCAACTGGGGAGCTACCTGGAGAAGGTGGAGCGTTTCCGCACGCTGGCGGTGTGGCTGG
GCCAGGAGGCGGGGCGAGCAGGGGAGGCGGCTACCATCGAGCGCGCCGCCACCCTGGCCAAGGCCGACCTCGTCACCGGC
ATGGTGGGCGAGTTCCCCGAGCTCCAGGGCATCATGGGCCGGGAGTACGCCCGCGCGGGCGGTGAGCCGGACGCCGTGGC
TCTGGCCATCGCGGAGCACTACCTGCCGCGTGGCGCCGAGGACGCGCTGCCCACGCAGGACCCGGGCGCGCTCATCGGTA
TCGCGGACAGGCTCGACTCGCTGTGCGGCATCTTCGCCATCGGCAAGGCGCCTACGGGGGCGGCGGACCCGTTCGCCCTG
CGCCGCGCGTGCATCGCCATCATCCGGCTGGTGCTGGGGCGGGGTTACCGCTTCAGCCTGTCGGCCGCGGTGGACGAGTC
GCTCCGGTTGCTGGCGCCGAAGATTGCCAACGCCAAGCGCAAGGCCGGCGAGCCCGCGCCGCGTGAGCAGGTGCTGGAGT
TCTTCCGCGGCCGCCTCAAGGCGCTGTGGGGTGAGCAGCACCGCACGGACGTCGTGGAGGCGGTGCTGTCCGCCGGCTTC
GACGACCTGGTGGCCGCGCAGAAGCGCCTGGAGGCCCTGAGCCACATCGTCGGCCGGGCGGACTTCCAGCCCCTGGCCGT
GGCCTTCAAGCGCGTGGTCAACATCGTGGAGAAGCAGGGCCGCGACGTGCAGGGGGGGGAGACCAACCCCCAGAAGCTGG
TGGACGAGCCGGAGCGGAACCTCCACACCGCCTTCACCCAGGCCCGGAGCACGGTGTCGGGGTTGGTGCGCGTGGATGAT
TTCTCCGGTGCTCTCCGGGAAATCACGGGCCTGAAGCCCGCCGTGGACACCTTCTTCGACAAGGTGATGGTCATGGCCGA
GGACAAGGCCCTGAGGGAAAACCGCATCCGCCTGCTCGTGGAGATTGGCGCCCTGTTCAACCAGGTGGCCGACTTCTCGA
AGATCCAGGCTGAAACAGCCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
GAGCAGCCCCCGGTGCTGGAGGGCAAGCCGGCCAGCGACTACTGGAAGACGGTCGTCCTCAACAAGCCCGTGGAGAAGAA
GCAGAAGGCGGAGGTGGCCC

Downstream 100 bases:

>100_bases
TGCGTGGCCTGCCTGCCCTCCGGGGAATGAAGCACCCCGGGGGGCACGGCTGCGTCGGGCGCAAGGCGCATGGGAATGGC
CCGCCGCGTTTCCGGTTGCC

Product: glycyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS

Number of amino acids: Translated: 703; Mature: 702

Protein sequence:

>703_residues
MARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDVADAGEDIIKEVLGPSAKAAF
DAQGKPTKAAEKFAESLKLAVDQLGRATTAKGEYLSARVEEKGRPAADILKDTLHAAVHGINFRKSMRWGDVDTSFARPV
QWLVALLGSDVLPVVFGDVTSGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKVRAAASKAGAQLL
EDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSLVDSAGKLQPKFIAVSNTPVRDEQLSLRGYQRV
LRARLADGRFFFDEDRKTPLIDRVEKLGRVVWQGQLGSYLEKVERFRTLAVWLGQEAGRAGEAATIERAATLAKADLVTG
MVGEFPELQGIMGREYARAGGEPDAVALAIAEHYLPRGAEDALPTQDPGALIGIADRLDSLCGIFAIGKAPTGAADPFAL
RRACIAIIRLVLGRGYRFSLSAAVDESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLKALWGEQHRTDVVEAVLSAGF
DDLVAAQKRLEALSHIVGRADFQPLAVAFKRVVNIVEKQGRDVQGGETNPQKLVDEPERNLHTAFTQARSTVSGLVRVDD
FSGALREITGLKPAVDTFFDKVMVMAEDKALRENRIRLLVEIGALFNQVADFSKIQAETAAAA

Sequences:

>Translated_703_residues
MARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDVADAGEDIIKEVLGPSAKAAF
DAQGKPTKAAEKFAESLKLAVDQLGRATTAKGEYLSARVEEKGRPAADILKDTLHAAVHGINFRKSMRWGDVDTSFARPV
QWLVALLGSDVLPVVFGDVTSGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKVRAAASKAGAQLL
EDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSLVDSAGKLQPKFIAVSNTPVRDEQLSLRGYQRV
LRARLADGRFFFDEDRKTPLIDRVEKLGRVVWQGQLGSYLEKVERFRTLAVWLGQEAGRAGEAATIERAATLAKADLVTG
MVGEFPELQGIMGREYARAGGEPDAVALAIAEHYLPRGAEDALPTQDPGALIGIADRLDSLCGIFAIGKAPTGAADPFAL
RRACIAIIRLVLGRGYRFSLSAAVDESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLKALWGEQHRTDVVEAVLSAGF
DDLVAAQKRLEALSHIVGRADFQPLAVAFKRVVNIVEKQGRDVQGGETNPQKLVDEPERNLHTAFTQARSTVSGLVRVDD
FSGALREITGLKPAVDTFFDKVMVMAEDKALRENRIRLLVEIGALFNQVADFSKIQAETAAAA
>Mature_702_residues
ARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDVADAGEDIIKEVLGPSAKAAFD
AQGKPTKAAEKFAESLKLAVDQLGRATTAKGEYLSARVEEKGRPAADILKDTLHAAVHGINFRKSMRWGDVDTSFARPVQ
WLVALLGSDVLPVVFGDVTSGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKVRAAASKAGAQLLE
DESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSLVDSAGKLQPKFIAVSNTPVRDEQLSLRGYQRVL
RARLADGRFFFDEDRKTPLIDRVEKLGRVVWQGQLGSYLEKVERFRTLAVWLGQEAGRAGEAATIERAATLAKADLVTGM
VGEFPELQGIMGREYARAGGEPDAVALAIAEHYLPRGAEDALPTQDPGALIGIADRLDSLCGIFAIGKAPTGAADPFALR
RACIAIIRLVLGRGYRFSLSAAVDESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLKALWGEQHRTDVVEAVLSAGFD
DLVAAQKRLEALSHIVGRADFQPLAVAFKRVVNIVEKQGRDVQGGETNPQKLVDEPERNLHTAFTQARSTVSGLVRVDDF
SGALREITGLKPAVDTFFDKVMVMAEDKALRENRIRLLVEIGALFNQVADFSKIQAETAAAA

Specific function: Unknown

COG id: COG0751

COG function: function code J; Glycyl-tRNA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789982, Length=702, Percent_Identity=37.6068376068376, Blast_Score=428, Evalue=1e-121,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYGB_MYXXD (Q1D7R9)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_631304.1
- ProteinModelPortal:   Q1D7R9
- STRING:   Q1D7R9
- GeneID:   4106578
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_3101
- TIGR:   MXAN_3101
- eggNOG:   COG0751
- HOGENOM:   HBG586599
- OMA:   FIRPVHT
- PhylomeDB:   Q1D7R9
- ProtClustDB:   PRK01233
- BioCyc:   MXAN246197:MXAN_3101-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00255
- InterPro:   IPR008909
- InterPro:   IPR006194
- InterPro:   IPR015944
- InterPro:   IPR002311
- PRINTS:   PR01045
- TIGRFAMs:   TIGR00211

Pfam domain/function: PF05746 DALR_1; PF02092 tRNA_synt_2f

EC number: =6.1.1.14

Molecular weight: Translated: 76789; Mature: 76658

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDV
CCCHHHHHCCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHH
ADAGEDIIKEVLGPSAKAAFDAQGKPTKAAEKFAESLKLAVDQLGRATTAKGEYLSARVE
HHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKGRPAADILKDTLHAAVHGINFRKSMRWGDVDTSFARPVQWLVALLGSDVLPVVFGDVT
HCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCC
SGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKVRAAASKAGAQLL
CCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSLVDSAGKLQPKFI
HHHHHHHHHHHHHHCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
AVSNTPVRDEQLSLRGYQRVLRARLADGRFFFDEDRKTPLIDRVEKLGRVVWQGQLGSYL
EECCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH
EKVERFRTLAVWLGQEAGRAGEAATIERAATLAKADLVTGMVGEFPELQGIMGREYARAG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GEPDAVALAIAEHYLPRGAEDALPTQDPGALIGIADRLDSLCGIFAIGKAPTGAADPFAL
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHH
RRACIAIIRLVLGRGYRFSLSAAVDESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLK
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALWGEQHRTDVVEAVLSAGFDDLVAAQKRLEALSHIVGRADFQPLAVAFKRVVNIVEKQG
HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
RDVQGGETNPQKLVDEPERNLHTAFTQARSTVSGLVRVDDFSGALREITGLKPAVDTFFD
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCHHHHHHHH
KVMVMAEDKALRENRIRLLVEIGALFNQVADFSKIQAETAAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDV
CCHHHHHCCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHH
ADAGEDIIKEVLGPSAKAAFDAQGKPTKAAEKFAESLKLAVDQLGRATTAKGEYLSARVE
HHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EKGRPAADILKDTLHAAVHGINFRKSMRWGDVDTSFARPVQWLVALLGSDVLPVVFGDVT
HCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCC
SGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKVRAAASKAGAQLL
CCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSLVDSAGKLQPKFI
HHHHHHHHHHHHHHCCCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
AVSNTPVRDEQLSLRGYQRVLRARLADGRFFFDEDRKTPLIDRVEKLGRVVWQGQLGSYL
EECCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHH
EKVERFRTLAVWLGQEAGRAGEAATIERAATLAKADLVTGMVGEFPELQGIMGREYARAG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GEPDAVALAIAEHYLPRGAEDALPTQDPGALIGIADRLDSLCGIFAIGKAPTGAADPFAL
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHH
RRACIAIIRLVLGRGYRFSLSAAVDESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLK
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALWGEQHRTDVVEAVLSAGFDDLVAAQKRLEALSHIVGRADFQPLAVAFKRVVNIVEKQG
HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
RDVQGGETNPQKLVDEPERNLHTAFTQARSTVSGLVRVDDFSGALREITGLKPAVDTFFD
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCCCHHHHHHHH
KVMVMAEDKALRENRIRLLVEIGALFNQVADFSKIQAETAAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA