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The map label for this gene is ycdJ [C]

Identifier: 108762787

GI number: 108762787

Start: 7030958

End: 7031848

Strand: Direct

Name: ycdJ [C]

Synonym: MXAN_5667

Alternate gene names: 108762787

Gene position: 7030958-7031848 (Clockwise)

Preceding gene: 108762732

Following gene: 108759130

Centisome position: 76.93

GC content: 74.64

Gene sequence:

>891_bases
ATGAAGGCTCCCTCGGTGGGGCCGGTGGAAGCCGCGTTGCTGGCCCAGCTGGCCCCGGCGGTGGTCGCGACGGTTCACTG
GTTGCCGGGCGGCGGGGCCCTCCGGGTCCTGGAGGCGGGCGCCGGCCCCACGGTGGTGCTGCTCCACGGGCGAGGCGGCG
CGGCCTCCCAGTGGTTCACCTACCTGACGGTCCTCGCCCGGAGCCACCGCGTGCTGGCGGTGGACCTGCCGGGCTTTGGC
ATGTCGTCCACCCCCGAAGGCCCGCTGGCCACTGGCGAGGACGCGGCGGCCTTCTTCACCGCCCCCATCGAGGCGCTGCT
GTCCCAGCTCGCCCCGGGCCCGGTGGCCGTGGTGGGTCACTCGCTGGGCGGGCTCGTGGCGCTGGAGCTCGCGCTGCGCG
GCCGGGTACCGGTGGAACGGCTGGCCCTGGTGGATGCCATGGGCCTGGGCCCGGAGATGGCGCGAAAAGCCCGCCTCTTC
TTCCGCGCCGGTCCCGAACGGCTGGCGCGCTCGCTGGGGCCATGGGCCTGGGCCCAGCTGATGCCGCCACCCCCGACGCC
GCTGGGTGAGCGGCTGGGCGCCCTGGAGTACGAACTTCACACCCGCCCGGGCGCCAGCCCCGACGCCGCGCGGGCTTTCA
ACCGGCTCGTGCCCGTGGCCGGGCCTGTCTTTCATCGCGCGGAAAAGCTCGACGCCATAACGGCGCCGGTGCTGCTCGTC
TGGGGAGAGCACGAGGACACCCTGCCCGTCTCCATCGCCGAGCAGGCGGCACGGCGCCTTCCCCAGGCTCGGCTCCTGCG
CCTGGACGCGGGCCACAGCCCCCACCAGGAACGTCCGGAGCGCGTGCTCCCCGAACTGAAGGCGTTCCTCGCCGCGCCCC
AGGAGCACTAG

Upstream 100 bases:

>100_bases
CCGTCCGCCCCTCCTGGAGTGTCCTCCCCATGTACCACTCACAGCCGCCACGCCAACCCCTGTTCCACTCCCGGCGGACG
CCGATGTCGAGGAAGGCGGC

Downstream 100 bases:

>100_bases
CGGCCGCACGGCAGGCAGGCGCCTGACGGCGGACAGGTGACACGGCCTGGTCCGGCAGTCGGAGCTCGTCCTGGCGGCGC
TTGTCCTGGCCTTCCGGGAT

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKAPSVGPVEAALLAQLAPAVVATVHWLPGGGALRVLEAGAGPTVVLLHGRGGAASQWFTYLTVLARSHRVLAVDLPGFG
MSSTPEGPLATGEDAAAFFTAPIEALLSQLAPGPVAVVGHSLGGLVALELALRGRVPVERLALVDAMGLGPEMARKARLF
FRAGPERLARSLGPWAWAQLMPPPPTPLGERLGALEYELHTRPGASPDAARAFNRLVPVAGPVFHRAEKLDAITAPVLLV
WGEHEDTLPVSIAEQAARRLPQARLLRLDAGHSPHQERPERVLPELKAFLAAPQEH

Sequences:

>Translated_296_residues
MKAPSVGPVEAALLAQLAPAVVATVHWLPGGGALRVLEAGAGPTVVLLHGRGGAASQWFTYLTVLARSHRVLAVDLPGFG
MSSTPEGPLATGEDAAAFFTAPIEALLSQLAPGPVAVVGHSLGGLVALELALRGRVPVERLALVDAMGLGPEMARKARLF
FRAGPERLARSLGPWAWAQLMPPPPTPLGERLGALEYELHTRPGASPDAARAFNRLVPVAGPVFHRAEKLDAITAPVLLV
WGEHEDTLPVSIAEQAARRLPQARLLRLDAGHSPHQERPERVLPELKAFLAAPQEH
>Mature_296_residues
MKAPSVGPVEAALLAQLAPAVVATVHWLPGGGALRVLEAGAGPTVVLLHGRGGAASQWFTYLTVLARSHRVLAVDLPGFG
MSSTPEGPLATGEDAAAFFTAPIEALLSQLAPGPVAVVGHSLGGLVALELALRGRVPVERLALVDAMGLGPEMARKARLF
FRAGPERLARSLGPWAWAQLMPPPPTPLGERLGALEYELHTRPGASPDAARAFNRLVPVAGPVFHRAEKLDAITAPVLLV
WGEHEDTLPVSIAEQAARRLPQARLLRLDAGHSPHQERPERVLPELKAFLAAPQEH

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31218; Mature: 31218

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPSVGPVEAALLAQLAPAVVATVHWLPGGGALRVLEAGAGPTVVLLHGRGGAASQWFT
CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCEEEEEECCCCCHHHHHH
YLTVLARSHRVLAVDLPGFGMSSTPEGPLATGEDAAAFFTAPIEALLSQLAPGPVAVVGH
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
SLGGLVALELALRGRVPVERLALVDAMGLGPEMARKARLFFRAGPERLARSLGPWAWAQL
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHC
MPPPPTPLGERLGALEYELHTRPGASPDAARAFNRLVPVAGPVFHRAEKLDAITAPVLLV
CCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEE
WGEHEDTLPVSIAEQAARRLPQARLLRLDAGHSPHQERPERVLPELKAFLAAPQEH
ECCCCCCCCHHHHHHHHHHCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKAPSVGPVEAALLAQLAPAVVATVHWLPGGGALRVLEAGAGPTVVLLHGRGGAASQWFT
CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCEEEEEECCCCCHHHHHH
YLTVLARSHRVLAVDLPGFGMSSTPEGPLATGEDAAAFFTAPIEALLSQLAPGPVAVVGH
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
SLGGLVALELALRGRVPVERLALVDAMGLGPEMARKARLFFRAGPERLARSLGPWAWAQL
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHC
MPPPPTPLGERLGALEYELHTRPGASPDAARAFNRLVPVAGPVFHRAEKLDAITAPVLLV
CCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEE
WGEHEDTLPVSIAEQAARRLPQARLLRLDAGHSPHQERPERVLPELKAFLAAPQEH
ECCCCCCCCHHHHHHHHHHCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]