| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is tgl
Identifier: 108762653
GI number: 108762653
Start: 3610985
End: 3611746
Strand: Direct
Name: tgl
Synonym: MXAN_3084
Alternate gene names: NA
Gene position: 3610985-3611746 (Clockwise)
Preceding gene: 108763730
Following gene: 108762224
Centisome position: 39.51
GC content: 64.57
Gene sequence:
>762_bases ATGTTCCGCCTTTCCACCGCGTCCTGTTCGCTCGCGCTGCTGCTGGTGTCCTCCGGTTGCTCCCACACGCCCACGGAGAA GGAGAAGCGGAGCGCCGAGATTCACTACGACCTGGCGTTGCAGGCCCAGCAGGCCGGCGAGCTCCAGGATGCGCTGCGCG AGCTGCAGGTGTCGCTGAAGAACGACCCGGACTACCCCGACGCGAACAACGCCATGGGCATCCTGCTGCACCTGGCGTTT CGCCGTCCCGACGAGGCCGTCAAGCACTACACCAAGGCACTGGAGGTTCGCCCCGACTTCTCCGAGGCGCGCACCAACCT CGCCAACGTGCACCTGGACCAGGGCCGCTACGACGACGCCATCAAGCTCTATGAGCTGGTCCTCAATGACATGCTCTACC CGACGCCCTTCATCGCCCAGGGAAACCTGGGGTGGGCGTACTACAAGAAGGGCGAGCCGGACCGCGCGGTGGAGAGCATC AAGGCCGCGGTGACGACCAACCCCAACTTCTGTTTGGGCTACAAGAACCTGGGGCTCATCTACGACGAGACGGGGCGCAC CTCCGAGGCGTGCCGCCAGTTCACGCACTACCGCGAGAATTGCCCGGACGTGGCGGAAGCGTACATGCGTGAGGGCGTCT GCCAGGCGAAGCTGGGGCAGGTCGATGCGGCGAAGGCAGCCTTCGCCACCTGTGAGACCAAGGCGAAAGCTGGTGAACAG GTGCTGAAGGATGACTGCCGGAGGCTGCTGGAAAAGCTCTAG
Upstream 100 bases:
>100_bases GCGCGCGCCGAGGAGAAGAAGAACGTCACCACCACCCTGGGCCGCTTCCTGGCCGCCTTCTGAGTCACCGCCCCCTCACC CTCGTCGAGAGCCGCTCCCC
Downstream 100 bases:
>100_bases CGCGTTGGGTATCTGGGGACCCGTGGACCACGTCGATTTCGGCAAATACCTGAGCCAGCAGCGAGAGCTCCGAGGGCTCT CGCGTGACGACGTCGCGCGG
Product: social gliding motility protein Tgl
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase; Social Gliding Motility Protein Tgl; TPR Domain-Containing Protein; TPR Repeat Protein; TPR Domain Containing Protein; TPR Repeat-Containing ; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat Domain Protein; Sporulation Domain-Containing Protein
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MFRLSTASCSLALLLVSSGCSHTPTEKEKRSAEIHYDLALQAQQAGELQDALRELQVSLKNDPDYPDANNAMGILLHLAF RRPDEAVKHYTKALEVRPDFSEARTNLANVHLDQGRYDDAIKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESI KAAVTTNPNFCLGYKNLGLIYDETGRTSEACRQFTHYRENCPDVAEAYMREGVCQAKLGQVDAAKAAFATCETKAKAGEQ VLKDDCRRLLEKL
Sequences:
>Translated_253_residues MFRLSTASCSLALLLVSSGCSHTPTEKEKRSAEIHYDLALQAQQAGELQDALRELQVSLKNDPDYPDANNAMGILLHLAF RRPDEAVKHYTKALEVRPDFSEARTNLANVHLDQGRYDDAIKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESI KAAVTTNPNFCLGYKNLGLIYDETGRTSEACRQFTHYRENCPDVAEAYMREGVCQAKLGQVDAAKAAFATCETKAKAGEQ VLKDDCRRLLEKL >Mature_253_residues MFRLSTASCSLALLLVSSGCSHTPTEKEKRSAEIHYDLALQAQQAGELQDALRELQVSLKNDPDYPDANNAMGILLHLAF RRPDEAVKHYTKALEVRPDFSEARTNLANVHLDQGRYDDAIKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESI KAAVTTNPNFCLGYKNLGLIYDETGRTSEACRQFTHYRENCPDVAEAYMREGVCQAKLGQVDAAKAAFATCETKAKAGEQ VLKDDCRRLLEKL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115532690, Length=132, Percent_Identity=30.3030303030303, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115532692, Length=179, Percent_Identity=27.3743016759777, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25147174, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17647755, Length=105, Percent_Identity=35.2380952380952, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24585827, Length=105, Percent_Identity=35.2380952380952, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24585829, Length=105, Percent_Identity=35.2380952380952, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28285; Mature: 28285
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLSTASCSLALLLVSSGCSHTPTEKEKRSAEIHYDLALQAQQAGELQDALRELQVSLK CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHC NDPDYPDANNAMGILLHLAFRRPDEAVKHYTKALEVRPDFSEARTNLANVHLDQGRYDDA CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCHHH IKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESIKAAVTTNPNFCLGYKNLGLI HHHHHHHHHHHCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCEE YDETGRTSEACRQFTHYRENCPDVAEAYMREGVCQAKLGQVDAAKAAFATCETKAKAGEQ ECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH VLKDDCRRLLEKL HHHHHHHHHHHHC >Mature Secondary Structure MFRLSTASCSLALLLVSSGCSHTPTEKEKRSAEIHYDLALQAQQAGELQDALRELQVSLK CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHC NDPDYPDANNAMGILLHLAFRRPDEAVKHYTKALEVRPDFSEARTNLANVHLDQGRYDDA CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCHHH IKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESIKAAVTTNPNFCLGYKNLGLI HHHHHHHHHHHCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCEE YDETGRTSEACRQFTHYRENCPDVAEAYMREGVCQAKLGQVDAAKAAFATCETKAKAGEQ ECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH VLKDDCRRLLEKL HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA