| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is srrA [H]
Identifier: 108762639
GI number: 108762639
Start: 819220
End: 820356
Strand: Direct
Name: srrA [H]
Synonym: MXAN_0715
Alternate gene names: 108762639
Gene position: 819220-820356 (Clockwise)
Preceding gene: 108761052
Following gene: 108761646
Centisome position: 8.96
GC content: 71.94
Gene sequence:
>1137_bases TTGAGCGGCGCGCCGACGCGCGAGCGCCTGCCGGCGATTCCGGCGGAGCCCGTCTGCCTGCTGCTGGTGGATGACCAGCC GGAGAACCTGCTGGCGCTGGAGGCGACGCTTGCGCCCCTGGGGCAGCGGCTGGTCACCGCGAGCAGCGGCCGCGAGGCGC TGCGTCACCTGCTGACGCAGGACTTCGCCGTCATCCTCCTGGACGTCGTCATGCCGGACATGGACGGCTTCGAGACGGCC CAGCTCATCCGCGAGCGAGAGCGCAGTCGCGGCACGCCCGTCATCTTCCTCACCGGGCTGTCGCGGGGGCCACATCCGGA GCTGCGCGGCTATGCCATGGGCGCGGTGGACTTCCTGCTCAAGCCCTTCGAGCCCGCCATCCTGCGCTCCAAGGTGAGCG TCTTCGTGGAGCTGTACCGCAAGACGGAGCTGGTGCGGCGGCAGGCGGAGGCGCTGCGCGAGGCCCAGCAGCGCGAGCAC GCGCGGGAGTTGCTGGAGGCGCAGCGGCGCGTGGAGGCCGAACGGCTTCGTTCAGAAACCAACCGAAACCAGCAGCGCTG GCTGGAGGCGGCGATTGCCGCGCTCCCCATGCCGCTGGCGTTGGTGGAGCCGGGAAGCGGCCACACCCTGCTGGCCAACC GGGCGGCGCAAGGGCTGGCGGGGGGCTGTCTGGCCTACCGCGAGGCGCGCGCGCTGCATGCGGACGCATGCTTCCGCGGC GCGGATGGCCGGCTGCTCGCGGATGAAGACCTGCCGCTGATGCGCGCCGCGCGCGGTGAGGTGTTCCAGGCGTTCCCCGT GGAGTGGAACGTGGGCGGCCAGCGCGGTTCGGTGCTCGCTTCCAGTGAGCGGCTGCCTCGCATGCATGGACGCCCGGAGA CCATGGTGCTGGGCCTCTTGGACGTGACGGCGCTCCGAGCCGCCGCTCGCCACGACTGGCTCCCCCTGCCGCTGACGGAG CACATCGCTACACTGGAGGCGCAGGGGGAGGACACAGGCCCGCTCACTCGGCTCATCGAGGTGCTGCGGAACCTTCCGGG CTTGAGCACCGGGAGCCCCGGACAGGAGCGCGAGGAGGGCTCCTTGCTAGCGGAAGAGGGCAGCCAGGCGGGCAACCCTC CTCGGCCCGCGCGCTGA
Upstream 100 bases:
>100_bases GCGGAGCGGGTGAGGAGGGAGCGATGGCGCAATTGACGTTGGGTTCCGTGGGAGGGTGGCTCGCGCGGCTGGCCTATGTG CCGCGTTCTAAGGTGCTGCC
Downstream 100 bases:
>100_bases ACATCGCCGGTCGAGAAATGGTTGACGCACAAAATAACATGGGCAAGGTGGCCGTGTGAGTGACGCCGGAATCCCACAGC GGGTCCAGCGCTTCATCTCG
Product: response regulator
Products: NA
Alternate protein names: Staphylococcal respiratory response protein A [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSGAPTRERLPAIPAEPVCLLLVDDQPENLLALEATLAPLGQRLVTASSGREALRHLLTQDFAVILLDVVMPDMDGFETA QLIRERERSRGTPVIFLTGLSRGPHPELRGYAMGAVDFLLKPFEPAILRSKVSVFVELYRKTELVRRQAEALREAQQREH ARELLEAQRRVEAERLRSETNRNQQRWLEAAIAALPMPLALVEPGSGHTLLANRAAQGLAGGCLAYREARALHADACFRG ADGRLLADEDLPLMRAARGEVFQAFPVEWNVGGQRGSVLASSERLPRMHGRPETMVLGLLDVTALRAAARHDWLPLPLTE HIATLEAQGEDTGPLTRLIEVLRNLPGLSTGSPGQEREEGSLLAEEGSQAGNPPRPAR
Sequences:
>Translated_378_residues MSGAPTRERLPAIPAEPVCLLLVDDQPENLLALEATLAPLGQRLVTASSGREALRHLLTQDFAVILLDVVMPDMDGFETA QLIRERERSRGTPVIFLTGLSRGPHPELRGYAMGAVDFLLKPFEPAILRSKVSVFVELYRKTELVRRQAEALREAQQREH ARELLEAQRRVEAERLRSETNRNQQRWLEAAIAALPMPLALVEPGSGHTLLANRAAQGLAGGCLAYREARALHADACFRG ADGRLLADEDLPLMRAARGEVFQAFPVEWNVGGQRGSVLASSERLPRMHGRPETMVLGLLDVTALRAAARHDWLPLPLTE HIATLEAQGEDTGPLTRLIEVLRNLPGLSTGSPGQEREEGSLLAEEGSQAGNPPRPAR >Mature_377_residues SGAPTRERLPAIPAEPVCLLLVDDQPENLLALEATLAPLGQRLVTASSGREALRHLLTQDFAVILLDVVMPDMDGFETAQ LIRERERSRGTPVIFLTGLSRGPHPELRGYAMGAVDFLLKPFEPAILRSKVSVFVELYRKTELVRRQAEALREAQQREHA RELLEAQRRVEAERLRSETNRNQQRWLEAAIAALPMPLALVEPGSGHTLLANRAAQGLAGGCLAYREARALHADACFRGA DGRLLADEDLPLMRAARGEVFQAFPVEWNVGGQRGSVLASSERLPRMHGRPETMVLGLLDVTALRAAARHDWLPLPLTEH IATLEAQGEDTGPLTRLIEVLRNLPGLSTGSPGQEREEGSLLAEEGSQAGNPPRPAR
Specific function: Member of the two-component regulatory system srrA/srrB, which is involved in the global regulation of staphylococcal virulence factors in response to environmental oxygen levels. SrrA binds to the agr, spa and tst promoters and represses their transcript
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=137, Percent_Identity=29.9270072992701, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI87082012, Length=113, Percent_Identity=33.6283185840708, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 41437; Mature: 41306
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAPTRERLPAIPAEPVCLLLVDDQPENLLALEATLAPLGQRLVTASSGREALRHLLTQ CCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHH DFAVILLDVVMPDMDGFETAQLIRERERSRGTPVIFLTGLSRGPHPELRGYAMGAVDFLL HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH KPFEPAILRSKVSVFVELYRKTELVRRQAEALREAQQREHARELLEAQRRVEAERLRSET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRNQQRWLEAAIAALPMPLALVEPGSGHTLLANRAAQGLAGGCLAYREARALHADACFRG CCHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADGRLLADEDLPLMRAARGEVFQAFPVEWNVGGQRGSVLASSERLPRMHGRPETMVLGLL CCCCEEECCCCHHHHHHCCCCEEECCCEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHH DVTALRAAARHDWLPLPLTEHIATLEAQGEDTGPLTRLIEVLRNLPGLSTGSPGQEREEG HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHC SLLAEEGSQAGNPPRPAR CEEHHCCCCCCCCCCCCC >Mature Secondary Structure SGAPTRERLPAIPAEPVCLLLVDDQPENLLALEATLAPLGQRLVTASSGREALRHLLTQ CCCCCHHHCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHH DFAVILLDVVMPDMDGFETAQLIRERERSRGTPVIFLTGLSRGPHPELRGYAMGAVDFLL HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH KPFEPAILRSKVSVFVELYRKTELVRRQAEALREAQQREHARELLEAQRRVEAERLRSET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRNQQRWLEAAIAALPMPLALVEPGSGHTLLANRAAQGLAGGCLAYREARALHADACFRG CCHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADGRLLADEDLPLMRAARGEVFQAFPVEWNVGGQRGSVLASSERLPRMHGRPETMVLGLL CCCCEEECCCCHHHHHHCCCCEEECCCEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHH DVTALRAAARHDWLPLPLTEHIATLEAQGEDTGPLTRLIEVLRNLPGLSTGSPGQEREEG HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHC SLLAEEGSQAGNPPRPAR CEEHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA