| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762630
Identifier: 108762630
GI number: 108762630
Start: 2480413
End: 2481942
Strand: Reverse
Name: 108762630
Synonym: MXAN_2147
Alternate gene names: NA
Gene position: 2481942-2480413 (Counterclockwise)
Preceding gene: 108758705
Following gene: 108762895
Centisome position: 27.16
GC content: 66.6
Gene sequence:
>1530_bases ATGCGTGCATGGTGGCAAGTGGCATGGGTCTGTCTGGCAACCGCGGGATGCGGTGGGCCTCTTCCAGAAGCATCGCTCTC CGAGGAACACGCCCCCGAGGAGGTCACCGCGCATTGGGATGCCCCACTCCCGAAGTTGGGGCCCGCCACGCTGTTGAAGG ACATCTACCCGCCTCCCCCGGGGCCATTCCCGGATCCCCTGGGTGGCCCGTCGCCAACGGATCTGGTGTCCTTCCGCGGC AAGCTCTTCTTCTCTGCCTTCGACTTCGAGGCGGACCGGGGCGCGCTGTGGCGGAGCGCGGGCACGACAGCGAGCACCGT CCCCGTCAAGCACCTGGACGATTCTCCCGGACGGCTGACCGTCGTCGGCAAGCAGCTCTTCTTCACCGAAGGCTTCCTAG AACACGGCGCGGACCTGTGGGTGAGTGATGGCACCACTGCGGGAACGCGTCAGGTGAAGGACCTCGCCCCGGAGGGCGGC ACCGCCTCCCTGGCGGACTTCATCGCGGTGGGCAACAAGCTCTACTTCTTCCGGTCGGTCCGGCCCACCCTCGTCGCCGC CGAGAACCTGGAGCTGTGGCGCAGTGATGGCACCTCGGCCGGCACGGTGCGCGTGAAGGACCTGGGGCCGAGGGACACCG TGAACGGGCCCTTTGACCTGGCGAGCGTGGGCAACCGCCTCTTCATGGGCCTCGGGATGCCCGACACCGGAGTGGAACTC TGGGTGAGTGACGGCAGCGCCTCCGGAACCCGCCTCGTCAAGGACATCAACCCGGGTGCCGCCTCTTCGTTCCCTCGGAG CCTGACGCAAGCGGAGGGGGTGCTCTACTTCTCCGCGGACGACGCCGTGCACGGCCGTGAACTCTGGCGCAGCGATGGCA CGGCCAAGGGCACGGAGCTGGTCGAGGACACCGTTCCCGGCCCCCAGGGCTCGGAAGCGCAAATCTTCGCCCTGTTCAAG GAGCGCCTCTACTTCGCCACCTTCACACCGGGATTCACGGTGACGGAGATTCGCAAGCTCGACCCGGACCCCTCCTGCCA CCCGCGCTCGAATCTCGTCGCGAGCATCCCCAACCCCTACGCCGACCTTCCCTTCGATTTCTTCATCTTCGTCGCCACGT CCACGGCGACCGAGAGAAAGCTCTACTTCACGCTCTTCTACGACATCGGCAGCCCCGCCCCCTTCGACGTCCAGTTGTGG CGGACCGATGCCACCGCCCAGGGAACGAAGCTGCTGTACCAGCCACTCATCGTCTCTCCGGACCTCCGACCGCCCACGCC GGTCCCCACCGATGACGGCCGCGTCGTCTTCTACGCCTTCGATGAAGCGCACGGCCACGAGCTTTGGGTGAGCAACGGAC AGCCGAGCGGCACCAAGCTCCTGCAGGACATCGTCCCGGGCCCCGCCTCTTCCTATCCGCAGGACCTGCTGCGCGCGGGC GACTTCATCTACTTCACGGCACTGGATGGGCAACTCGGCCGGGAGATCTGGGTATTGCCCGTGCCAAAGCCTCAGGTCGC GAGTCACTGA
Upstream 100 bases:
>100_bases GAAGATTTGCGACCAGGAACCCGGCGCTCCCCCTGGCCGCGGCGCTGCTCCGGACTTATCGCCATCGGGGCTGTCGCCCA CCCGAGAACGAGGGGAAATC
Downstream 100 bases:
>100_bases CGCCTCGCCAACCCATCGCGCTGGCGGCCTGCCGTTTCTCGGAGGCTGCCCCCGCCCCGTGCGACTGCCTCAGACGACAC ACTTCATGACGCCGCATTCA
Product: putative lipoprotein
Products: NA
Alternate protein names: Hyalin Repeat Protein; Hyalin Repeat-Containing Protein; Cna B Domain-Containing Protein; Quinoprotein; Cycloinulo-Oligosaccharide Fructanotransferase; Ig Family Protein; Cadherin
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MRAWWQVAWVCLATAGCGGPLPEASLSEEHAPEEVTAHWDAPLPKLGPATLLKDIYPPPPGPFPDPLGGPSPTDLVSFRG KLFFSAFDFEADRGALWRSAGTTASTVPVKHLDDSPGRLTVVGKQLFFTEGFLEHGADLWVSDGTTAGTRQVKDLAPEGG TASLADFIAVGNKLYFFRSVRPTLVAAENLELWRSDGTSAGTVRVKDLGPRDTVNGPFDLASVGNRLFMGLGMPDTGVEL WVSDGSASGTRLVKDINPGAASSFPRSLTQAEGVLYFSADDAVHGRELWRSDGTAKGTELVEDTVPGPQGSEAQIFALFK ERLYFATFTPGFTVTEIRKLDPDPSCHPRSNLVASIPNPYADLPFDFFIFVATSTATERKLYFTLFYDIGSPAPFDVQLW RTDATAQGTKLLYQPLIVSPDLRPPTPVPTDDGRVVFYAFDEAHGHELWVSNGQPSGTKLLQDIVPGPASSYPQDLLRAG DFIYFTALDGQLGREIWVLPVPKPQVASH
Sequences:
>Translated_509_residues MRAWWQVAWVCLATAGCGGPLPEASLSEEHAPEEVTAHWDAPLPKLGPATLLKDIYPPPPGPFPDPLGGPSPTDLVSFRG KLFFSAFDFEADRGALWRSAGTTASTVPVKHLDDSPGRLTVVGKQLFFTEGFLEHGADLWVSDGTTAGTRQVKDLAPEGG TASLADFIAVGNKLYFFRSVRPTLVAAENLELWRSDGTSAGTVRVKDLGPRDTVNGPFDLASVGNRLFMGLGMPDTGVEL WVSDGSASGTRLVKDINPGAASSFPRSLTQAEGVLYFSADDAVHGRELWRSDGTAKGTELVEDTVPGPQGSEAQIFALFK ERLYFATFTPGFTVTEIRKLDPDPSCHPRSNLVASIPNPYADLPFDFFIFVATSTATERKLYFTLFYDIGSPAPFDVQLW RTDATAQGTKLLYQPLIVSPDLRPPTPVPTDDGRVVFYAFDEAHGHELWVSNGQPSGTKLLQDIVPGPASSYPQDLLRAG DFIYFTALDGQLGREIWVLPVPKPQVASH >Mature_509_residues MRAWWQVAWVCLATAGCGGPLPEASLSEEHAPEEVTAHWDAPLPKLGPATLLKDIYPPPPGPFPDPLGGPSPTDLVSFRG KLFFSAFDFEADRGALWRSAGTTASTVPVKHLDDSPGRLTVVGKQLFFTEGFLEHGADLWVSDGTTAGTRQVKDLAPEGG TASLADFIAVGNKLYFFRSVRPTLVAAENLELWRSDGTSAGTVRVKDLGPRDTVNGPFDLASVGNRLFMGLGMPDTGVEL WVSDGSASGTRLVKDINPGAASSFPRSLTQAEGVLYFSADDAVHGRELWRSDGTAKGTELVEDTVPGPQGSEAQIFALFK ERLYFATFTPGFTVTEIRKLDPDPSCHPRSNLVASIPNPYADLPFDFFIFVATSTATERKLYFTLFYDIGSPAPFDVQLW RTDATAQGTKLLYQPLIVSPDLRPPTPVPTDDGRVVFYAFDEAHGHELWVSNGQPSGTKLLQDIVPGPASSYPQDLLRAG DFIYFTALDGQLGREIWVLPVPKPQVASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55096; Mature: 55096
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAWWQVAWVCLATAGCGGPLPEASLSEEHAPEEVTAHWDAPLPKLGPATLLKDIYPPPP CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCC GPFPDPLGGPSPTDLVSFRGKLFFSAFDFEADRGALWRSAGTTASTVPVKHLDDSPGRLT CCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCEEECCCCCCCCCCHHCCCCCCCEEE VVGKQLFFTEGFLEHGADLWVSDGTTAGTRQVKDLAPEGGTASLADFIAVGNKLYFFRSV EEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHCCEEEEEECC RPTLVAAENLELWRSDGTSAGTVRVKDLGPRDTVNGPFDLASVGNRLFMGLGMPDTGVEL CCEEEEECCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCEE WVSDGSASGTRLVKDINPGAASSFPRSLTQAEGVLYFSADDAVHGRELWRSDGTAKGTEL EEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHCCCCCCCHHH VEDTVPGPQGSEAQIFALFKERLYFATFTPGFTVTEIRKLDPDPSCHPRSNLVASIPNPY HHHCCCCCCCCCHHHHEEEHHCEEEEEECCCCEEHHHEECCCCCCCCCCCCEEEECCCCC ADLPFDFFIFVATSTATERKLYFTLFYDIGSPAPFDVQLWRTDATAQGTKLLYQPLIVSP CCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCEEECC DLRPPTPVPTDDGRVVFYAFDEAHGHELWVSNGQPSGTKLLQDIVPGPASSYPQDLLRAG CCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHCC DFIYFTALDGQLGREIWVLPVPKPQVASH CEEEEEEECCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MRAWWQVAWVCLATAGCGGPLPEASLSEEHAPEEVTAHWDAPLPKLGPATLLKDIYPPPP CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCC GPFPDPLGGPSPTDLVSFRGKLFFSAFDFEADRGALWRSAGTTASTVPVKHLDDSPGRLT CCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCEEECCCCCCCCCCHHCCCCCCCEEE VVGKQLFFTEGFLEHGADLWVSDGTTAGTRQVKDLAPEGGTASLADFIAVGNKLYFFRSV EEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHCCEEEEEECC RPTLVAAENLELWRSDGTSAGTVRVKDLGPRDTVNGPFDLASVGNRLFMGLGMPDTGVEL CCEEEEECCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCEE WVSDGSASGTRLVKDINPGAASSFPRSLTQAEGVLYFSADDAVHGRELWRSDGTAKGTEL EEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHCCCCCCCHHH VEDTVPGPQGSEAQIFALFKERLYFATFTPGFTVTEIRKLDPDPSCHPRSNLVASIPNPY HHHCCCCCCCCCHHHHEEEHHCEEEEEECCCCEEHHHEECCCCCCCCCCCCEEEECCCCC ADLPFDFFIFVATSTATERKLYFTLFYDIGSPAPFDVQLWRTDATAQGTKLLYQPLIVSP CCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCEEECC DLRPPTPVPTDDGRVVFYAFDEAHGHELWVSNGQPSGTKLLQDIVPGPASSYPQDLLRAG CCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHCC DFIYFTALDGQLGREIWVLPVPKPQVASH CEEEEEEECCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA