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The map label for this gene is ybhP [H]

Identifier: 108762628

GI number: 108762628

Start: 3167578

End: 3168342

Strand: Direct

Name: ybhP [H]

Synonym: MXAN_2715

Alternate gene names: 108762628

Gene position: 3167578-3168342 (Clockwise)

Preceding gene: 108758189

Following gene: 108761621

Centisome position: 34.66

GC content: 68.5

Gene sequence:

>765_bases
GTGGAGCTGAGGCTCGTTTCGTACAACATCCATAGTGGTATCGGAACGGACGGCCGCTTCGACCTGGGCCGCGTGGGCGC
GGTGCTCCGCGAAGTGGACGCGGACATCGTCGCTCTTCAGGAGGTAGGCGACTTTCGCGCGGTGACGCCTCGGGAGGACC
AGCCCGAACACCTGGCGGACATGCTCGGGCTGCACATGGCCTTTGGTCCCAATGTCGTGCGCAACGGCCGGCGCTACGGC
AACGCCATCCTGTCGCGGCTGCCCATCGTCAAGTCGAGGAACTACGACTTGAGCGTGGGCCGCCGCGAGCCTCGCGGCGC
GCTACGCTGCGACTTGGACATCGGGGGAGGGCTGCAACTCCACGTCTTCTCCCTCCATCTGGGCCTGCGCCTGGGGGAGC
GGCGCAGGCAGGAGGCGCTGCTGTTGTCCTCGGACATCCTCCGCGATGCCGCGCGGAAGGACCCGTTGGTGGTGTGTGGA
GATTTCAACTACTGGGGCAATGGCCCGGTGCCCTCGCTGGTGCGCCAGGCCATCCACGACGCGGCGCTGGAGCTCGGCGC
GCCCGCTCGCACGTACCCCACGCGCCTGCCCCTGCTGCGGCTGGACCGCATCTTCGTGGACGCGGGCGTGCGCCCGCTGT
CCATCCATCCGCACCGCACGGAGTTGAGCCGGGTGGCGTCTGATCACCTGCCCCTCGTGCTGCGCTTCGAGGCCCCCATC
CCCGTGGAGCCTTCCGTCTCTCCTCCTGTGCAGCTCATCGGGTAG

Upstream 100 bases:

>100_bases
CCGTCAAGGCCGTGTCCCGGCTCATCCTGCTGCCCGTCACGCTCGTCCGCATGGCCGCGGGCCGCATCCTTCCTCTGTCC
TGATTGGGTGAGCGACGCGC

Downstream 100 bases:

>100_bases
ACTGGACGGATGGGCCGACGCGCGCGTTCACTGGCCGACGCTTGCGTGCGCCGGACAAAAACTCCGTGACGTGGTTGTCG
CGGAACAGGTGCATGCCTAG

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MELRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLADMLGLHMAFGPNVVRNGRRYG
NAILSRLPIVKSRNYDLSVGRREPRGALRCDLDIGGGLQLHVFSLHLGLRLGERRRQEALLLSSDILRDAARKDPLVVCG
DFNYWGNGPVPSLVRQAIHDAALELGAPARTYPTRLPLLRLDRIFVDAGVRPLSIHPHRTELSRVASDHLPLVLRFEAPI
PVEPSVSPPVQLIG

Sequences:

>Translated_254_residues
MELRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLADMLGLHMAFGPNVVRNGRRYG
NAILSRLPIVKSRNYDLSVGRREPRGALRCDLDIGGGLQLHVFSLHLGLRLGERRRQEALLLSSDILRDAARKDPLVVCG
DFNYWGNGPVPSLVRQAIHDAALELGAPARTYPTRLPLLRLDRIFVDAGVRPLSIHPHRTELSRVASDHLPLVLRFEAPI
PVEPSVSPPVQLIG
>Mature_254_residues
MELRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLADMLGLHMAFGPNVVRNGRRYG
NAILSRLPIVKSRNYDLSVGRREPRGALRCDLDIGGGLQLHVFSLHLGLRLGERRRQEALLLSSDILRDAARKDPLVVCG
DFNYWGNGPVPSLVRQAIHDAALELGAPARTYPTRLPLLRLDRIFVDAGVRPLSIHPHRTELSRVASDHLPLVLRFEAPI
PVEPSVSPPVQLIG

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=244, Percent_Identity=38.5245901639344, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28073; Mature: 28073

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLAD
CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCCHHHHHH
MLGLHMAFGPNVVRNGRRYGNAILSRLPIVKSRNYDLSVGRREPRGALRCDLDIGGGLQL
HHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCEE
HVFSLHLGLRLGERRRQEALLLSSDILRDAARKDPLVVCGDFNYWGNGPVPSLVRQAIHD
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH
AALELGAPARTYPTRLPLLRLDRIFVDAGVRPLSIHPHRTELSRVASDHLPLVLRFEAPI
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCC
PVEPSVSPPVQLIG
CCCCCCCCCCEECC
>Mature Secondary Structure
MELRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLAD
CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCCHHHHHH
MLGLHMAFGPNVVRNGRRYGNAILSRLPIVKSRNYDLSVGRREPRGALRCDLDIGGGLQL
HHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCEE
HVFSLHLGLRLGERRRQEALLLSSDILRDAARKDPLVVCGDFNYWGNGPVPSLVRQAIHD
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH
AALELGAPARTYPTRLPLLRLDRIFVDAGVRPLSIHPHRTELSRVASDHLPLVLRFEAPI
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCC
PVEPSVSPPVQLIG
CCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]