Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108762455

Identifier: 108762455

GI number: 108762455

Start: 271678

End: 273312

Strand: Reverse

Name: 108762455

Synonym: MXAN_0224

Alternate gene names: NA

Gene position: 273312-271678 (Counterclockwise)

Preceding gene: 108759887

Following gene: 108763021

Centisome position: 2.99

GC content: 68.13

Gene sequence:

>1635_bases
ATGCGTCGCTCGCCATGGTCGGCGTCGATGAGGGCGGTACGCTCAGGGGCCAGCGCGGCACGCCGGGCCAGCCAGTCATG
GACGATGGGCATGGTATCCACGCTAGCTGAACCCGGCGGCATCGCGTCGGCTCAGGAAAGGGAAGCGGGCAAGCAACCCG
CCTCACCGTCACCTCCCCACCCGCTCGGAGGGCCACACGACATGCAGCCCCCATCCCCCCCATGGCTGCTCGTCGCAATG
CTCCTCCTGCTGTGTGCGGAAGCAGGAGCCGCATCCACGCGGCTCCCGCGCACTGAACGCACACGCCGCGCCAAAGCCTC
CGCCACGCTGGAGCAGTCACTCCTCGCGGCCGTGCGGGACGCAGGCTTTGACCAGGTGCTCGACTTCAAGCGCGACGGTG
CGCGCATCGCCCACGCACCCTACGTCGACGTCGCCGTCATCGAACTGGACGCCCGGAGCCGTCCCACGGCCGCCGCCAAC
GTGCTGCTGTCACGCGACTACCCAACTGGCGCCATCGTCCCCATCGACGTCGAAACGCTGGGCACCACGGCAGTGCGTTA
CACAGCGTGGAATCTGGACCGCTGGGACAGCGGCGCCCACGATGCCACACCCACGGAGCCCCTGGTCCCCGGACGAGACA
AAGCGCCGCTCCGCTTCATGGCGCCCTACCCCGCCTCGCTCTTCAAGCTGCTCATCGCCTTTCGCGTCCTCCGGTGGGTG
GACCAGGGTCACCTCACGTGGGACCAGCCCTGGCGCTTCCTCCGAGACACCGAGGACAAGGGCACGCGCCCGATACGTGA
CTGGCTGGAGCCGATGGTGACCGAATCGGACAACACCGCCACCGAGGCCCTGGTGAAGCTGCTCCACGAACAAGGCGCGA
TGGCGAGCCTCAACGCGGAGCTGGCGGCGCTGGGCCTGGACACGCTGCAAGTCCATGGCACGTCCCCGGTGACAGGCCGG
AGCTGGAACCCCGGCCAGATTCACATGACAGCGCTGGATACAGCGCGGCTGCTGCTGCTCATCGAAGGAGGCCCCGGTGT
CCTCTGGCGCACCGCATCGGGCCGCGATGTGACGGCGAAGGAACTCTCTGGCGCGTCCAGAACCCACCTCCAATCCCTAC
TCGCCGACCAGGCCCTGCACGAAGCGCTGTCATCCACGCTGCTGTGCGGAGATGCGCGCGCGGAACCAGGCATCCCCGCG
GCCGTCCCTACTCGATGGGTGAACTCCGAGGACGGCACCGTAACGGCGGCGGAGACCGCCTTCGGCCGGGACACGCGCCC
CTGCAACGCGACGGCGGAAGTCACATTCCTCCATAAGACAGGGCTGACGGAGAACTACGGCAGCGACGGCGGCATCGTCC
GCTCCCTGCCCGGCAAACCCTGGCGCCGATACATCGTCGTGTTCCTGTCCAACCTGGGCTACCGCTACTACGACGCGAAA
GTGGCCGACGCGGCGGACTTCGCGAAGGGCGAAGACGGCTTCCCTTACGTCAGCACGTCCATCAGCTACACGCAGCGAAT
CCCTGCGCTGGGCCGCCAAATCGACGCGATGATGCGGGAGCGTCAGCGCGCACGCCCCCAGAGTCCTCCTGCGAAGGACG
CCGCTCCCCAACAGGCGCCTCGGCCCGCTCGATAG

Upstream 100 bases:

>100_bases
GTAGGCGAGCACCGCGACACGGTCCCCTCGCCCCACACCCAGCGCATGGTGGAGGAAAGCGGCGGTACGCGAAGCCGAAT
CGTTCCATTCACGAAAGGAG

Downstream 100 bases:

>100_bases
AATGGGGCTTTCGGCCGTGCCGTCGCGTGCTTGAAAGTACGTGCCGGGACACACAGCACGGCCTGAATGTGCGTCACCCC
AGGCACACAGAAAGTCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPHPLGGPHDMQPPSPPWLLVAM
LLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRDAGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAAN
VLLSRDYPTGAIVPIDVETLGTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV
DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAELAALGLDTLQVHGTSPVTGR
SWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAKELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPA
AVPTRWVNSEDGTVTAAETAFGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK
VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAPRPAR

Sequences:

>Translated_544_residues
MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPHPLGGPHDMQPPSPPWLLVAM
LLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRDAGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAAN
VLLSRDYPTGAIVPIDVETLGTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV
DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAELAALGLDTLQVHGTSPVTGR
SWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAKELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPA
AVPTRWVNSEDGTVTAAETAFGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK
VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAPRPAR
>Mature_544_residues
MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPHPLGGPHDMQPPSPPWLLVAM
LLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRDAGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAAN
VLLSRDYPTGAIVPIDVETLGTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV
DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAELAALGLDTLQVHGTSPVTGR
SWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAKELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPA
AVPTRWVNSEDGTVTAAETAFGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK
VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAPRPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59016; Mature: 59016

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPH
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC
PLGGPHDMQPPSPPWLLVAMLLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAANVLLSRDYPTGAIVPIDVETL
CCHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCCHHHHEEEECCCCCCCEEEEEHHHC
GTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAE
HCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCH
LAALGLDTLQVHGTSPVTGRSWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAK
HHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEECCCCCCCCHH
ELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPAAVPTRWVNSEDGTVTAAETA
HHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
FGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCH
VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAP
HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RPAR
CCCC
>Mature Secondary Structure
MRRSPWSASMRAVRSGASAARRASQSWTMGMVSTLAEPGGIASAQEREAGKQPASPSPPH
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCC
PLGGPHDMQPPSPPWLLVAMLLLLCAEAGAASTRLPRTERTRRAKASATLEQSLLAAVRD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGFDQVLDFKRDGARIAHAPYVDVAVIELDARSRPTAAANVLLSRDYPTGAIVPIDVETL
CCHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCCHHHHEEEECCCCCCCEEEEEHHHC
GTTAVRYTAWNLDRWDSGAHDATPTEPLVPGRDKAPLRFMAPYPASLFKLLIAFRVLRWV
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
DQGHLTWDQPWRFLRDTEDKGTRPIRDWLEPMVTESDNTATEALVKLLHEQGAMASLNAE
HCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCH
LAALGLDTLQVHGTSPVTGRSWNPGQIHMTALDTARLLLLIEGGPGVLWRTASGRDVTAK
HHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEECCCCCCCCHH
ELSGASRTHLQSLLADQALHEALSSTLLCGDARAEPGIPAAVPTRWVNSEDGTVTAAETA
HHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
FGRDTRPCNATAEVTFLHKTGLTENYGSDGGIVRSLPGKPWRRYIVVFLSNLGYRYYDAK
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCH
VADAADFAKGEDGFPYVSTSISYTQRIPALGRQIDAMMRERQRARPQSPPAKDAAPQQAP
HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RPAR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA