| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yyaM [H]
Identifier: 108762434
GI number: 108762434
Start: 3877486
End: 3878397
Strand: Reverse
Name: yyaM [H]
Synonym: MXAN_3334
Alternate gene names: 108762434
Gene position: 3878397-3877486 (Counterclockwise)
Preceding gene: 108761094
Following gene: 108761281
Centisome position: 42.43
GC content: 70.61
Gene sequence:
>912_bases GTGTCCACGCCCACCACCGCCGTTGTGCCCGCCCCCTCACGCGGCATCTCCGCGTCCGACCTGGCCATCGTCGGCGTCGT GATTGCCTGGGGCACCAACTACACAGTGGTGAAGGAGGCGATGGAGACGCTCCCTCCCCTGGCCTTCATGTCGCTGCGCT TCACCATCGCGGCGTTGGCCATGGGCGCGCTGCTCCTCGGCGTCGAAGGCTGGAAGCCGCTTCCGCGCCCGGTGTTCCTC AAGCTGCTGGGGCTCGGGCTGGTGGGCAACACCGTGTACCAGGTGTGCTTCATCGTCGGCTTGGCGAACACCTCGGTGGC GAACAGCGGGATGCTGACAGCGGTGACGCCGGTGCTGGTGGCCACGCTTGGCGCCGTGTTCGGCGTGGATCGGCTCACCC GCCCGCTCATCGCGGCACTGGCGCTGGGCGTGGTGGGGATGCTGCTGGTGCTGGGGGGACGCGGCGCGTCCGAACATGGA GCGTCCTTGATTGGCGACGGGCTCATCGTCGGCGCGAGCCTCTGCTGGGCCATCTACACGGTGGGCATCCGCACCGTGGG TCCGGAGGTGTCCGCGCTGCGCATCACCGCCATCAGCATGCTCACGGGCGCACCGGGCGTGGTGCTCGTGGGCGTGCCCG AGCTGCTGCGGCTGGAGACCGAGAACATCCGCGCCGGCGCCTGGGCGGGCGTCGTGTACTCGGCGCTGGTGCCGCTGGTG CTCGCGTACTTCACCTGGGGCCGCACCGTGCAGAAGGTGGGCAGCAGCCGCGCGGGGCTCTACAACACGGGCATCCCCGT GGTGGCCGCCCTCACGGCGTGGGCCGTGCGTGGAGAGCAGCCCACCTGGATGCAGGTGCTCGGAGCGGGGCTCGTCCTCT CCGGCGTGCTGCTCAGCCGGCGGAAGTCGTAG
Upstream 100 bases:
>100_bases CCTCTTCCGAAAAGCGTAGGTCCATGCCCTGGCGTTTAGCATGCCCGGCTCCAAACGTCGGCTTGCGCGCGCGACCCCTC GGGCCTATTCCCCTGCCGCC
Downstream 100 bases:
>100_bases GCGCCGGGGCCTGACTCACTCCCGGCGCCCCCGCTCCACCGCGAGCCCGTACTCCTCAATCTTCTTGTCCAGCGTGGGCC GGCTGATGCCGAGCAGCGCC
Product: drug/metabolite exporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSTPTTAVVPAPSRGISASDLAIVGVVIAWGTNYTVVKEAMETLPPLAFMSLRFTIAALAMGALLLGVEGWKPLPRPVFL KLLGLGLVGNTVYQVCFIVGLANTSVANSGMLTAVTPVLVATLGAVFGVDRLTRPLIAALALGVVGMLLVLGGRGASEHG ASLIGDGLIVGASLCWAIYTVGIRTVGPEVSALRITAISMLTGAPGVVLVGVPELLRLETENIRAGAWAGVVYSALVPLV LAYFTWGRTVQKVGSSRAGLYNTGIPVVAALTAWAVRGEQPTWMQVLGAGLVLSGVLLSRRKS
Sequences:
>Translated_303_residues MSTPTTAVVPAPSRGISASDLAIVGVVIAWGTNYTVVKEAMETLPPLAFMSLRFTIAALAMGALLLGVEGWKPLPRPVFL KLLGLGLVGNTVYQVCFIVGLANTSVANSGMLTAVTPVLVATLGAVFGVDRLTRPLIAALALGVVGMLLVLGGRGASEHG ASLIGDGLIVGASLCWAIYTVGIRTVGPEVSALRITAISMLTGAPGVVLVGVPELLRLETENIRAGAWAGVVYSALVPLV LAYFTWGRTVQKVGSSRAGLYNTGIPVVAALTAWAVRGEQPTWMQVLGAGLVLSGVLLSRRKS >Mature_302_residues STPTTAVVPAPSRGISASDLAIVGVVIAWGTNYTVVKEAMETLPPLAFMSLRFTIAALAMGALLLGVEGWKPLPRPVFLK LLGLGLVGNTVYQVCFIVGLANTSVANSGMLTAVTPVLVATLGAVFGVDRLTRPLIAALALGVVGMLLVLGGRGASEHGA SLIGDGLIVGASLCWAIYTVGIRTVGPEVSALRITAISMLTGAPGVVLVGVPELLRLETENIRAGAWAGVVYSALVPLVL AYFTWGRTVQKVGSSRAGLYNTGIPVVAALTAWAVRGEQPTWMQVLGAGLVLSGVLLSRRKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87082351, Length=305, Percent_Identity=29.5081967213115, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31180; Mature: 31048
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTTAVVPAPSRGISASDLAIVGVVIAWGTNYTVVKEAMETLPPLAFMSLRFTIAALA CCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH MGALLLGVEGWKPLPRPVFLKLLGLGLVGNTVYQVCFIVGLANTSVANSGMLTAVTPVLV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ATLGAVFGVDRLTRPLIAALALGVVGMLLVLGGRGASEHGASLIGDGLIVGASLCWAIYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHH VGIRTVGPEVSALRITAISMLTGAPGVVLVGVPELLRLETENIRAGAWAGVVYSALVPLV HHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHH LAYFTWGRTVQKVGSSRAGLYNTGIPVVAALTAWAVRGEQPTWMQVLGAGLVLSGVLLSR HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RKS CCC >Mature Secondary Structure STPTTAVVPAPSRGISASDLAIVGVVIAWGTNYTVVKEAMETLPPLAFMSLRFTIAALA CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH MGALLLGVEGWKPLPRPVFLKLLGLGLVGNTVYQVCFIVGLANTSVANSGMLTAVTPVLV HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ATLGAVFGVDRLTRPLIAALALGVVGMLLVLGGRGASEHGASLIGDGLIVGASLCWAIYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHH VGIRTVGPEVSALRITAISMLTGAPGVVLVGVPELLRLETENIRAGAWAGVVYSALVPLV HHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHH LAYFTWGRTVQKVGSSRAGLYNTGIPVVAALTAWAVRGEQPTWMQVLGAGLVLSGVLLSR HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RKS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]