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The map label for this gene is exbD [H]

Identifier: 108762409

GI number: 108762409

Start: 934643

End: 935077

Strand: Direct

Name: exbD [H]

Synonym: MXAN_0819

Alternate gene names: 108762409

Gene position: 934643-935077 (Clockwise)

Preceding gene: 108756839

Following gene: 108756868

Centisome position: 10.23

GC content: 65.29

Gene sequence:

>435_bases
ATGGCGGGCAGCGCGCAGGACAACGACGACGAAATCACCGGCATCAACGTCACCCCGCTGGTGGACGTGGTGCTGGTGCT
GCTCATCATCTTCATGGTGACGGCCAACTTCATCGTCCGTGAGACGGTGGAGGTGGACCTGCCCCGAGCCGCCAACGGCG
GTGAGACGGTGCAGGGCCTGGTCAACGTGGTGCTGGACAAGGAGGGCAAGTTCTTCTTCGACGGCACCGAGATGACCGAG
AAGGAGTTGGAGGCGAAGGTCGCCGAGGCGGTGGCCAAGGACAAGGACACGCGCGCCATCATCAGCGCCGACCAGTCGCT
GCCCTACGGCCGCGTCATGCGGCTCATCGATGTGGTGAAGGGTCAGGGCATCGCGAAGTTCGCGCTCAACATCGAGAAGG
ACGTGGCCCCCGCGGCTGCGCCCGCAGCGCCCTGA

Upstream 100 bases:

>100_bases
CTTCAACGTCTTCAGCCGTCAGCTCAAGACGCTCACCAGCCGCGCCAATGCCCTGGGCCACGCGCTGGTGGGCAGTCTTC
GCTCGGAGGCCCGTTAGGCC

Downstream 100 bases:

>100_bases
AGCGAGGCATCAGCGCATGAGTCAGGCGGTCCTCGAAAATAGTCCCACGACGCCCACGCACGACCGCTCGCTCGCCGTGG
TGGGCGCATTCCTGCTCGTG

Product: ExbD/TolR family transport energizing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAGSAQDNDDEITGINVTPLVDVVLVLLIIFMVTANFIVRETVEVDLPRAANGGETVQGLVNVVLDKEGKFFFDGTEMTE
KELEAKVAEAVAKDKDTRAIISADQSLPYGRVMRLIDVVKGQGIAKFALNIEKDVAPAAAPAAP

Sequences:

>Translated_144_residues
MAGSAQDNDDEITGINVTPLVDVVLVLLIIFMVTANFIVRETVEVDLPRAANGGETVQGLVNVVLDKEGKFFFDGTEMTE
KELEAKVAEAVAKDKDTRAIISADQSLPYGRVMRLIDVVKGQGIAKFALNIEKDVAPAAAPAAP
>Mature_143_residues
AGSAQDNDDEITGINVTPLVDVVLVLLIIFMVTANFIVRETVEVDLPRAANGGETVQGLVNVVLDKEGKFFFDGTEMTEK
ELEAKVAEAVAKDKDTRAIISADQSLPYGRVMRLIDVVKGQGIAKFALNIEKDVAPAAAPAAP

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400
- InterPro:   IPR014171 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15356; Mature: 15225

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSAQDNDDEITGINVTPLVDVVLVLLIIFMVTANFIVRETVEVDLPRAANGGETVQGL
CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VNVVLDKEGKFFFDGTEMTEKELEAKVAEAVAKDKDTRAIISADQSLPYGRVMRLIDVVK
HHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHC
GQGIAKFALNIEKDVAPAAAPAAP
CCCHHHHHCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
AGSAQDNDDEITGINVTPLVDVVLVLLIIFMVTANFIVRETVEVDLPRAANGGETVQGL
CCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VNVVLDKEGKFFFDGTEMTEKELEAKVAEAVAKDKDTRAIISADQSLPYGRVMRLIDVVK
HHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHC
GQGIAKFALNIEKDVAPAAAPAAP
CCCHHHHHCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA