| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mac1 [C]
Identifier: 108762378
GI number: 108762378
Start: 642090
End: 643769
Strand: Direct
Name: mac1 [C]
Synonym: MXAN_0559
Alternate gene names: 108762378
Gene position: 642090-643769 (Clockwise)
Preceding gene: 108763290
Following gene: 108760690
Centisome position: 7.03
GC content: 66.96
Gene sequence:
>1680_bases ATGGCCCAGAATTTCATCTTCACGATGCAGGACCTGCGCAAGGTCAAGAACGGCAAGGAGATCCTCAAGGGCATCTACCT CTCGTTCTTCCCCGGCGCGAAGATTGGCGTCATTGGCCCCAACGGCTCCGGTAAGTCGACGCTGCTGCGCATCATGGCGG GCGTGGACACGGAGTTCTTCGGTGTCGCCAAGCCGGACCCCAGCGCCAAGGTTGGCTACCTGGCGCAGGAGCCACAGCTC GATGCCTCGCTCGACGTGAAGGGCAACGTGGAGCTGGGCCTGAAGGAGATTCGCGCCACGCTGGACCGCTTCAACGAGGT CAGCGCGAAGTTCGCCGAGCCCATGAGCGACGCGGAGATGGAGAAGCTGCTGGCCGAGCAGGGCCGGCTGCAGGACGCCA TCGACGCGGTGAATGGTTGGGAGCTGGACCGCACCATCGAGATGGCCATGGACGCGCTGCGCCTGCCGCCGGGCGACGCG GACGTGACGAAGCTGTCCGGTGGTGAGAAGCGCCGCGTGGCGCTGTGCCGCATCCTGCTGGAGAAGCCGGACCTGCTCCT CCTGGACGAGCCCACCAACCACCTGGACGCGGAGAGCGTCGCGTGGCTGGAGCAGGCGCTCAAGGAGTACAAGGGCACCA TCGTGTGCATCACCCACGACCGGTACTTCCTGGACAACGCGGCCGAGTGGATTCTGGAGCTGGACCGCGGCGAGGGTGTG CCCTGGAAGGGCAACTACTCCAGCTGGCTGGAGCAGAAGCAGAAGCGCCTGGAGCTGGAGGAGAAGTCGGAGAGCCACCG CCAGAAGACGCTCAAGCGCGAGCTGGAGTGGGTGCGTGCCTCCCCGAAGGCCCGTCAGGCCAAGAGCAAGGCGCGCATCG CGGCCTACGAGGAGCTGCTCAACCAGACGCAGGACAAGCGCGACGCGACGGGCGAGGTCATCATCCCGCCCGGCCCGCAG CTCGGGGGGCTGGTGGTCGAGGCCAAGGGGCTGCGCAAGGCGTACGGCGACCGGCTGCTCATCGAGGACCTGAACTTCAA GCTCCCGCGCGGTGGCATCGTGGGCGTCATCGGTCCCAACGGCGCGGGCAAGACGACGCTGTTCCGGATGATGACGGGCG TGGAGAAGCCGGACGAGGGCGAGCTGAACATCGGCGAGACGGTGAAGCTGGCCTACGTGGACCAGAGCCGCGACGCGCTG GACGGCGACAACTCGGTGTTCCAGGAGGTGAGCGGCGGGCTGGACCACCTGGACCTGGGCAAGGCGGGGCAGGTGCCCAG CCGCGCGTACCTGGCGGGCTTCGCCTTCAAGGGGCAGGACCAGCAGAAGCGGGTGAAGGACCTGTCCGGTGGTGAGCGCA ACCGCGTGCACCTGGCGAAGATGCTCAAGAGCGGCGGCAACCTCTTGCTGCTCGACGAGCCCACCAACGACCTGGACGTG GAGACGCTGCGCAGCCTGGAGGACGCGCTGCTCGGCTTCGCGGGCTGCGCCGTGGTCATCAGCCACGACCGCTGGTTCCT CGACCGCATCGCCACGCACATCCTGGCGTTCGAGGGCGACAGCAAGGCGTTCTTCTTCGAGGGCAACTTCGAGGACTACG AGGCGGACAAGAAGAAGCGCCTGGGCCCCGAGGCCCTGGAGCCGCACCGCATCCGCTACCGCCCGATTACGAAGAGCTGA
Upstream 100 bases:
>100_bases TTCGAGCCCCACAGGGTTGGGGGACGCTCTCGCCTTGAGTGCGCTGTTGCACCCTGGTATCCGCAGAGCCCCTCACTCCA CCTTAAGCAGGAAGGCCCAG
Downstream 100 bases:
>100_bases GCCGCTGGAAGTCCGGAGCCACCGTACCTGCAAGGTGCGGTGGCTCGACGGCGCTTCACCTCAGCACCGCGAACGCCATG AGCAGCTTCTTCATGTCGCT
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MAQNFIFTMQDLRKVKNGKEILKGIYLSFFPGAKIGVIGPNGSGKSTLLRIMAGVDTEFFGVAKPDPSAKVGYLAQEPQL DASLDVKGNVELGLKEIRATLDRFNEVSAKFAEPMSDAEMEKLLAEQGRLQDAIDAVNGWELDRTIEMAMDALRLPPGDA DVTKLSGGEKRRVALCRILLEKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTIVCITHDRYFLDNAAEWILELDRGEGV PWKGNYSSWLEQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEELLNQTQDKRDATGEVIIPPGPQ LGGLVVEAKGLRKAYGDRLLIEDLNFKLPRGGIVGVIGPNGAGKTTLFRMMTGVEKPDEGELNIGETVKLAYVDQSRDAL DGDNSVFQEVSGGLDHLDLGKAGQVPSRAYLAGFAFKGQDQQKRVKDLSGGERNRVHLAKMLKSGGNLLLLDEPTNDLDV ETLRSLEDALLGFAGCAVVISHDRWFLDRIATHILAFEGDSKAFFFEGNFEDYEADKKKRLGPEALEPHRIRYRPITKS
Sequences:
>Translated_559_residues MAQNFIFTMQDLRKVKNGKEILKGIYLSFFPGAKIGVIGPNGSGKSTLLRIMAGVDTEFFGVAKPDPSAKVGYLAQEPQL DASLDVKGNVELGLKEIRATLDRFNEVSAKFAEPMSDAEMEKLLAEQGRLQDAIDAVNGWELDRTIEMAMDALRLPPGDA DVTKLSGGEKRRVALCRILLEKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTIVCITHDRYFLDNAAEWILELDRGEGV PWKGNYSSWLEQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEELLNQTQDKRDATGEVIIPPGPQ LGGLVVEAKGLRKAYGDRLLIEDLNFKLPRGGIVGVIGPNGAGKTTLFRMMTGVEKPDEGELNIGETVKLAYVDQSRDAL DGDNSVFQEVSGGLDHLDLGKAGQVPSRAYLAGFAFKGQDQQKRVKDLSGGERNRVHLAKMLKSGGNLLLLDEPTNDLDV ETLRSLEDALLGFAGCAVVISHDRWFLDRIATHILAFEGDSKAFFFEGNFEDYEADKKKRLGPEALEPHRIRYRPITKS >Mature_558_residues AQNFIFTMQDLRKVKNGKEILKGIYLSFFPGAKIGVIGPNGSGKSTLLRIMAGVDTEFFGVAKPDPSAKVGYLAQEPQLD ASLDVKGNVELGLKEIRATLDRFNEVSAKFAEPMSDAEMEKLLAEQGRLQDAIDAVNGWELDRTIEMAMDALRLPPGDAD VTKLSGGEKRRVALCRILLEKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTIVCITHDRYFLDNAAEWILELDRGEGVP WKGNYSSWLEQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEELLNQTQDKRDATGEVIIPPGPQL GGLVVEAKGLRKAYGDRLLIEDLNFKLPRGGIVGVIGPNGAGKTTLFRMMTGVEKPDEGELNIGETVKLAYVDQSRDALD GDNSVFQEVSGGLDHLDLGKAGQVPSRAYLAGFAFKGQDQQKRVKDLSGGERNRVHLAKMLKSGGNLLLLDEPTNDLDVE TLRSLEDALLGFAGCAVVISHDRWFLDRIATHILAFEGDSKAFFFEGNFEDYEADKKKRLGPEALEPHRIRYRPITKS
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI27881506, Length=522, Percent_Identity=28.3524904214559, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI10947137, Length=522, Percent_Identity=28.3524904214559, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI69354671, Length=569, Percent_Identity=27.2407732864675, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI10947135, Length=569, Percent_Identity=27.2407732864675, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI148612853, Length=542, Percent_Identity=26.1992619926199, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI42741659, Length=339, Percent_Identity=26.8436578171091, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI2367384, Length=559, Percent_Identity=61.8962432915921, Blast_Score=698, Evalue=0.0, Organism=Escherichia coli, GI1787182, Length=505, Percent_Identity=36.2376237623762, Blast_Score=284, Evalue=9e-78, Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=32.7651515151515, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=30.7984790874525, Blast_Score=218, Evalue=1e-57, Organism=Escherichia coli, GI48994943, Length=491, Percent_Identity=26.4765784114053, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI87081782, Length=550, Percent_Identity=24.7272727272727, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI87081709, Length=194, Percent_Identity=32.9896907216495, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788761, Length=242, Percent_Identity=30.9917355371901, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788897, Length=201, Percent_Identity=31.3432835820896, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=31.6326530612245, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1788165, Length=186, Percent_Identity=32.258064516129, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787164, Length=178, Percent_Identity=31.4606741573034, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787105, Length=240, Percent_Identity=30, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790467, Length=169, Percent_Identity=32.5443786982249, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787370, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786703, Length=227, Percent_Identity=29.9559471365639, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786345, Length=201, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786563, Length=184, Percent_Identity=29.8913043478261, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786398, Length=191, Percent_Identity=29.8429319371728, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1789891, Length=234, Percent_Identity=24.7863247863248, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559834, Length=552, Percent_Identity=28.4420289855072, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17555318, Length=538, Percent_Identity=26.9516728624535, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17553372, Length=559, Percent_Identity=28.6225402504472, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI115534520, Length=263, Percent_Identity=26.9961977186312, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17569143, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17558664, Length=255, Percent_Identity=27.843137254902, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115535101, Length=259, Percent_Identity=27.4131274131274, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=538, Percent_Identity=30.1115241635688, Blast_Score=182, Evalue=9e-47, Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=27.6051188299817, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6323278, Length=373, Percent_Identity=27.8820375335121, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6324314, Length=382, Percent_Identity=26.1780104712042, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6325030, Length=376, Percent_Identity=26.5957446808511, Blast_Score=103, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6320266, Length=381, Percent_Identity=23.6220472440945, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24642252, Length=550, Percent_Identity=29.0909090909091, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI18859989, Length=550, Percent_Identity=29.0909090909091, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=29.8892988929889, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24666836, Length=548, Percent_Identity=28.2846715328467, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI21357907, Length=251, Percent_Identity=26.2948207171315, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022374 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 62087; Mature: 61955
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQNFIFTMQDLRKVKNGKEILKGIYLSFFPGAKIGVIGPNGSGKSTLLRIMAGVDTEFF CCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCE GVAKPDPSAKVGYLAQEPQLDASLDVKGNVELGLKEIRATLDRFNEVSAKFAEPMSDAEM ECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EKLLAEQGRLQDAIDAVNGWELDRTIEMAMDALRLPPGDADVTKLSGGEKRRVALCRILL HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHH EKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTIVCITHDRYFLDNAAEWILELDRGEGV CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCC PWKGNYSSWLEQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEELL CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NQTQDKRDATGEVIIPPGPQLGGLVVEAKGLRKAYGDRLLIEDLNFKLPRGGIVGVIGPN HHHHHHHCCCCCEEECCCCCCCCEEEECCHHHHHHCCEEEEECCCCCCCCCCEEEEECCC GAGKTTLFRMMTGVEKPDEGELNIGETVKLAYVDQSRDALDGDNSVFQEVSGGLDHLDLG CCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC KAGQVPSRAYLAGFAFKGQDQQKRVKDLSGGERNRVHLAKMLKSGGNLLLLDEPTNDLDV CCCCCCCHHHHEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCH ETLRSLEDALLGFAGCAVVISHDRWFLDRIATHILAFEGDSKAFFFEGNFEDYEADKKKR HHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHEEEECCCEEEEEECCCCHHCCHHHHC LGPEALEPHRIRYRPITKS CCCCCCCCCCEEECCCCCC >Mature Secondary Structure AQNFIFTMQDLRKVKNGKEILKGIYLSFFPGAKIGVIGPNGSGKSTLLRIMAGVDTEFF CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCE GVAKPDPSAKVGYLAQEPQLDASLDVKGNVELGLKEIRATLDRFNEVSAKFAEPMSDAEM ECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EKLLAEQGRLQDAIDAVNGWELDRTIEMAMDALRLPPGDADVTKLSGGEKRRVALCRILL HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHH EKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTIVCITHDRYFLDNAAEWILELDRGEGV CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCC PWKGNYSSWLEQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEELL CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NQTQDKRDATGEVIIPPGPQLGGLVVEAKGLRKAYGDRLLIEDLNFKLPRGGIVGVIGPN HHHHHHHCCCCCEEECCCCCCCCEEEECCHHHHHHCCEEEEECCCCCCCCCCEEEEECCC GAGKTTLFRMMTGVEKPDEGELNIGETVKLAYVDQSRDALDGDNSVFQEVSGGLDHLDLG CCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCC KAGQVPSRAYLAGFAFKGQDQQKRVKDLSGGERNRVHLAKMLKSGGNLLLLDEPTNDLDV CCCCCCCHHHHEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCH ETLRSLEDALLGFAGCAVVISHDRWFLDRIATHILAFEGDSKAFFFEGNFEDYEADKKKR HHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHEEEECCCEEEEEECCCCHHCCHHHHC LGPEALEPHRIRYRPITKS CCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]