| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762363
Identifier: 108762363
GI number: 108762363
Start: 6249903
End: 6251945
Strand: Reverse
Name: 108762363
Synonym: MXAN_5000
Alternate gene names: NA
Gene position: 6251945-6249903 (Counterclockwise)
Preceding gene: 108761520
Following gene: 108759425
Centisome position: 68.4
GC content: 70.48
Gene sequence:
>2043_bases GTGGATCAGTCCGGGCGCGCCGTCCTGGGACGAGGCGCCCCAGAATGGCGCACACCCTCCGGCCAACCGCTTGATTTCCC GGCAGGCCCCTCGCTGGCCGGCCGCCTGCACGGGTGGGGGCCACCACAGGGAGGCACGCACATGAGCGCGAAGCAGACGG CCCGCACGAAGGAGGCGCAGGAGACGGGGGAGGGCGGCGGGAGGACGCACCTGGTCCGGATGGACGGCGGGGGCGGAGGC AAGCTGGAACAGCCGCGCTATGTGGACGGGTGGCGTGCCGGCAAGCCCGCGGAGGACCCGGAGAAGATGAAGCGCTGGGG GCTCGTCACCGCGCGGCCCAGTGAGTTCCTGGTCCACATGCGGCGCGGCCGGGTGCGGGAGGTCAGCGGCCAGGGCGCCA GTTGTTTCAAGCTGCCGGGGGACTCGGTGGCCATTGTCCCCACCAGCATCCAGCGACTTCAGTTCACCGCGGACCAGGTG ACGCACGAGAAGGTGGGCGTGCAGGTGACGGGGCTGGCGGTGTACCGGATTTCAGACCCGCTGGTGGCCTTCCGCATGCT CAACTTCTCCTTCCCGGAGCGCGCGCAGGAGAAGCTGGCCGAGCTGCTGCGGGAGATGTTCGTCGGCGCCGCGCGGCGGC TGGTGGCGAACATGTCCGTGGAGGAGTGCCTCTCCAAGCGCAAGGAGGGCATCGCCGCGGAGCTGGTGCGCGAAATCGCG CCCGTGCTCTCCGGCCGAGGCCGCCTGGAGGACCAGACGGACGCGGGCTGGGGCGTCATCCTGGACACGATTGAAATCCA GGACGTGCGCGTCCTGTCCTCCACCGTCTTCGCCAACATGCAGGCGCGCTTCCGCCATGAACAGGAGCGGCAGGCGCGTG AGGCGGAGCTGGCCAAGGAGCGCTTCGTCCACCGCGAGGAGACGGAAGCCGAGCGTCAGCTGAGCCTCCAGCGGCTGGCG GCCGAGGAGGAGGTGCGCCAGAAGAAGCAGACAGCGGAGGAGCAGGCCCGGCTGGAGGCGCTGGCGGTGGAGGCGCGCGT GGCCGAGGCGAAGCTCGCCCAGGAGCGCACGCTGAAGCAGGAGCAGGCCACCGTGGAGCGCGAGGTGGCGCTGGCGAAGA TGGCCGCTGAGCAGGAGGTCCGCCAGAAGAAGCAGGTGGCCGACGAACAGGCGAAGTTGGATGCGCTGGCCGCGGAGTCC CGCCTGGCCGACGCGAAAATCGTCTCCGAGCGGGCGCTGGCCGTCAGCCGCGCTCAGGTGGAGATGGAGAAGCTCCAGCG CGAACAGGACGCGGAGGTCGCGCGCCAGCGCGTGGCCCTGGAGAAGCTCAAGCGCGAGCAGGACACGGAGGCCGGTCGCG CGAAACTGGAGCTGGAGAAGCTGAAGCTGGCGCAGGAGTCCGAGGCCGCGCAGGCGAAAATCGAGCTGGTGCGGCTCCAG CGCGCGCAGGAGGCGGAGAACGCCAAGGCGCAGATGGAGCTGGCGCGGCAGCAGCGTGAACAGGCGCTGGAGCTGTCACG CCAGCGGCACGAGCAGGAGGTGGAGCTGGCGAAGCTGCGCCGCGAGCAGGAGGAGGCCGGCGCCAAGGCGCAGCTGGAGC TGGAGCGCCTGCGCCGCGAGCACGAACAGGCCACCGTGTGGCACGAGGTGCAGATGGCCGCGCACCAGCAGGAGGCCGAA CGGCTCCACGCGGAGCTCCAGGTGGTGCAGGCCCGGCGGTCCATCGTGGAGACAGAGGTAGTCATCGCCGAGCTGAGTGT GCGCAAGGACCGGGCGCAGCAGGACCTGGAGCTGGGCAAGGCGCGCGCGCTGCGCGACATCGAGAACAGCGTTAGCCCGG AGGTCATCCAGATGGCCCTGGCGCAGCAGCTCCCGCAGGTGGCCGCGGCCTTCCAGCAGAAGATGGGCGAGGTGCACGTC ACCGCGGTGGATGGGGCCAATCCGTTTGGTTACATCGCCGCCGCGGTGGAGGGCGTCATGGGGCTGGCACGTTCCGCCGG ACTGAAGACGCCTGCTTCCCCGCTTGCCCCTCCAGCGCAGTAG
Upstream 100 bases:
>100_bases AATATAAAAAGGGGCGCCTTCGGGTCAAGCGAACATCAGGCGCGCCGCGGGTGTGGGTGCGTGCTCCCAATAGGACGTCT TAAGTGAACGCCGCGCCATC
Downstream 100 bases:
>100_bases CCCGTGGCCCCCGGCCTGCGTATACAAGGGGGGCCTGGGAGCACGGAGTCACGCGCGCATGGATGCGAAGAAACTCGGAG TGATGGCGGTGCTGGCCGGA
Product: SPFH domain-containing protein/band 7 family protein
Products: NA
Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; Membrane Protease Subunit Stomatin/Prohibitin-Like Protein
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MDQSGRAVLGRGAPEWRTPSGQPLDFPAGPSLAGRLHGWGPPQGGTHMSAKQTARTKEAQETGEGGGRTHLVRMDGGGGG KLEQPRYVDGWRAGKPAEDPEKMKRWGLVTARPSEFLVHMRRGRVREVSGQGASCFKLPGDSVAIVPTSIQRLQFTADQV THEKVGVQVTGLAVYRISDPLVAFRMLNFSFPERAQEKLAELLREMFVGAARRLVANMSVEECLSKRKEGIAAELVREIA PVLSGRGRLEDQTDAGWGVILDTIEIQDVRVLSSTVFANMQARFRHEQERQAREAELAKERFVHREETEAERQLSLQRLA AEEEVRQKKQTAEEQARLEALAVEARVAEAKLAQERTLKQEQATVEREVALAKMAAEQEVRQKKQVADEQAKLDALAAES RLADAKIVSERALAVSRAQVEMEKLQREQDAEVARQRVALEKLKREQDTEAGRAKLELEKLKLAQESEAAQAKIELVRLQ RAQEAENAKAQMELARQQREQALELSRQRHEQEVELAKLRREQEEAGAKAQLELERLRREHEQATVWHEVQMAAHQQEAE RLHAELQVVQARRSIVETEVVIAELSVRKDRAQQDLELGKARALRDIENSVSPEVIQMALAQQLPQVAAAFQQKMGEVHV TAVDGANPFGYIAAAVEGVMGLARSAGLKTPASPLAPPAQ
Sequences:
>Translated_680_residues MDQSGRAVLGRGAPEWRTPSGQPLDFPAGPSLAGRLHGWGPPQGGTHMSAKQTARTKEAQETGEGGGRTHLVRMDGGGGG KLEQPRYVDGWRAGKPAEDPEKMKRWGLVTARPSEFLVHMRRGRVREVSGQGASCFKLPGDSVAIVPTSIQRLQFTADQV THEKVGVQVTGLAVYRISDPLVAFRMLNFSFPERAQEKLAELLREMFVGAARRLVANMSVEECLSKRKEGIAAELVREIA PVLSGRGRLEDQTDAGWGVILDTIEIQDVRVLSSTVFANMQARFRHEQERQAREAELAKERFVHREETEAERQLSLQRLA AEEEVRQKKQTAEEQARLEALAVEARVAEAKLAQERTLKQEQATVEREVALAKMAAEQEVRQKKQVADEQAKLDALAAES RLADAKIVSERALAVSRAQVEMEKLQREQDAEVARQRVALEKLKREQDTEAGRAKLELEKLKLAQESEAAQAKIELVRLQ RAQEAENAKAQMELARQQREQALELSRQRHEQEVELAKLRREQEEAGAKAQLELERLRREHEQATVWHEVQMAAHQQEAE RLHAELQVVQARRSIVETEVVIAELSVRKDRAQQDLELGKARALRDIENSVSPEVIQMALAQQLPQVAAAFQQKMGEVHV TAVDGANPFGYIAAAVEGVMGLARSAGLKTPASPLAPPAQ >Mature_680_residues MDQSGRAVLGRGAPEWRTPSGQPLDFPAGPSLAGRLHGWGPPQGGTHMSAKQTARTKEAQETGEGGGRTHLVRMDGGGGG KLEQPRYVDGWRAGKPAEDPEKMKRWGLVTARPSEFLVHMRRGRVREVSGQGASCFKLPGDSVAIVPTSIQRLQFTADQV THEKVGVQVTGLAVYRISDPLVAFRMLNFSFPERAQEKLAELLREMFVGAARRLVANMSVEECLSKRKEGIAAELVREIA PVLSGRGRLEDQTDAGWGVILDTIEIQDVRVLSSTVFANMQARFRHEQERQAREAELAKERFVHREETEAERQLSLQRLA AEEEVRQKKQTAEEQARLEALAVEARVAEAKLAQERTLKQEQATVEREVALAKMAAEQEVRQKKQVADEQAKLDALAAES RLADAKIVSERALAVSRAQVEMEKLQREQDAEVARQRVALEKLKREQDTEAGRAKLELEKLKLAQESEAAQAKIELVRLQ RAQEAENAKAQMELARQQREQALELSRQRHEQEVELAKLRREQEEAGAKAQLELERLRREHEQATVWHEVQMAAHQQEAE RLHAELQVVQARRSIVETEVVIAELSVRKDRAQQDLELGKARALRDIENSVSPEVIQMALAQQLPQVAAAFQQKMGEVHV TAVDGANPFGYIAAAVEGVMGLARSAGLKTPASPLAPPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75635; Mature: 75635
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQSGRAVLGRGAPEWRTPSGQPLDFPAGPSLAGRLHGWGPPQGGTHMSAKQTARTKEAQ CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ETGEGGGRTHLVRMDGGGGGKLEQPRYVDGWRAGKPAEDPEKMKRWGLVTARPSEFLVHM HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH RRGRVREVSGQGASCFKLPGDSVAIVPTSIQRLQFTADQVTHEKVGVQVTGLAVYRISDP HHCCHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCH LVAFRMLNFSFPERAQEKLAELLREMFVGAARRLVANMSVEECLSKRKEGIAAELVREIA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH PVLSGRGRLEDQTDAGWGVILDTIEIQDVRVLSSTVFANMQARFRHEQERQAREAELAKE HHHCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFVHREETEAERQLSLQRLAAEEEVRQKKQTAEEQARLEALAVEARVAEAKLAQERTLKQ HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQATVEREVALAKMAAEQEVRQKKQVADEQAKLDALAAESRLADAKIVSERALAVSRAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMEKLQREQDAEVARQRVALEKLKREQDTEAGRAKLELEKLKLAQESEAAQAKIELVRLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQEAENAKAQMELARQQREQALELSRQRHEQEVELAKLRREQEEAGAKAQLELERLRRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HEQATVWHEVQMAAHQQEAERLHAELQVVQARRSIVETEVVIAELSVRKDRAQQDLELGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARALRDIENSVSPEVIQMALAQQLPQVAAAFQQKMGEVHVTAVDGANPFGYIAAAVEGVM HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHH GLARSAGLKTPASPLAPPAQ HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDQSGRAVLGRGAPEWRTPSGQPLDFPAGPSLAGRLHGWGPPQGGTHMSAKQTARTKEAQ CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ETGEGGGRTHLVRMDGGGGGKLEQPRYVDGWRAGKPAEDPEKMKRWGLVTARPSEFLVHM HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH RRGRVREVSGQGASCFKLPGDSVAIVPTSIQRLQFTADQVTHEKVGVQVTGLAVYRISDP HHCCHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCH LVAFRMLNFSFPERAQEKLAELLREMFVGAARRLVANMSVEECLSKRKEGIAAELVREIA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH PVLSGRGRLEDQTDAGWGVILDTIEIQDVRVLSSTVFANMQARFRHEQERQAREAELAKE HHHCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFVHREETEAERQLSLQRLAAEEEVRQKKQTAEEQARLEALAVEARVAEAKLAQERTLKQ HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQATVEREVALAKMAAEQEVRQKKQVADEQAKLDALAAESRLADAKIVSERALAVSRAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMEKLQREQDAEVARQRVALEKLKREQDTEAGRAKLELEKLKLAQESEAAQAKIELVRLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQEAENAKAQMELARQQREQALELSRQRHEQEVELAKLRREQEEAGAKAQLELERLRRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HEQATVWHEVQMAAHQQEAERLHAELQVVQARRSIVETEVVIAELSVRKDRAQQDLELGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARALRDIENSVSPEVIQMALAQQLPQVAAAFQQKMGEVHVTAVDGANPFGYIAAAVEGVM HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHH GLARSAGLKTPASPLAPPAQ HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA