| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is tonB
Identifier: 108762335
GI number: 108762335
Start: 329523
End: 330332
Strand: Reverse
Name: tonB
Synonym: MXAN_0276
Alternate gene names: NA
Gene position: 330332-329523 (Counterclockwise)
Preceding gene: 108758210
Following gene: 108763356
Centisome position: 3.61
GC content: 71.73
Gene sequence:
>810_bases ATGGCGTCGCTATATGCGCGTCCAGTCATGTTCGAGACCTTCGACAGCGGCCCGGACGTCCAATCGGCGCGGCGGTTCGC GCTCTCCACTACGGCATCCGTCGCCGTGTTCGCGCTGATGGGCATCGCCGCCGTCACCGCTGCCGGCAAGGTGACGGAAG TCATCAAAGAGAAGAAGGGCACGGACGTGGTGTTCCGTCCGCCGCCCCCTCCTCCGCCGCCCCCCGTGGTCGAGGCGAAG CCGCCTCCTCCGCCCCCGCCTCCTCCCAAGCCAAAGCTGGCGCCCAAGCCCGCGCCGCCCGCCGCCGCGAAGGCGCCGCC GCCGGCCGCGCCCACCGTGGCGCCCGCGCCCATCGTCGTTCCCAAGGAAGTGCCGCTGGAGAAGCCGCCCGAGGCCGCGA CGGAGACGGTGGCCGCCGCGCCCATCGCCGTGGGTGGCACCGGCGCGCTCGTTCCCGGCGGTGTGGTGGGCGGTGTCCCC GGCGGTGACACACTCGCCGGTGGTGGCGGTCGCGTCGCGCCCATCAATCTCCCGGAGTCCGGCACGCCGCCGGAGCCCCT GTCCTCCAACCTCACGCCGGAATACCCCTCCGAGGCCCGCTCCAAGGGCCTGGAAGGCATGGTCATCCTCAAGGGCGTGG TGGGCGTGGATGGCCGCGTCAGCCAGCTGAAGGTGATGCGCGGCGACGAGCCCTTCGCCAGCGCGGCCATGGCCGCCGCG AAGACGTGGCGCTTCAAGCCCGCAGTTGTCGGCGGTCAGCCCACCGCGGTGTTCCGCATCTTCAAGGTTCCGTTCCGTCT CAAGTCGTAA
Upstream 100 bases:
>100_bases TGTCACGCCTGCCACGTTGCTTTGGTGGCGGGCTCGCGCCGTGACGCTTCCGTCAAGTTGATGGAAGCAAAGTGTCACGG GCCCCGGACAGGCCCGACAC
Downstream 100 bases:
>100_bases GCCGAAAACGCCTCACCCGCACCTGCCCCCCAGGAGCAACCCGTCATGAATTTCAATCTCAGGGACATCTACAACCACAT GGGTGTGTTCGCGCTGGGCA
Product: ferric siderophore transporter, periplasmic energy transduction protein TonB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MASLYARPVMFETFDSGPDVQSARRFALSTTASVAVFALMGIAAVTAAGKVTEVIKEKKGTDVVFRPPPPPPPPPVVEAK PPPPPPPPPKPKLAPKPAPPAAAKAPPPAAPTVAPAPIVVPKEVPLEKPPEAATETVAAAPIAVGGTGALVPGGVVGGVP GGDTLAGGGGRVAPINLPESGTPPEPLSSNLTPEYPSEARSKGLEGMVILKGVVGVDGRVSQLKVMRGDEPFASAAMAAA KTWRFKPAVVGGQPTAVFRIFKVPFRLKS
Sequences:
>Translated_269_residues MASLYARPVMFETFDSGPDVQSARRFALSTTASVAVFALMGIAAVTAAGKVTEVIKEKKGTDVVFRPPPPPPPPPVVEAK PPPPPPPPPKPKLAPKPAPPAAAKAPPPAAPTVAPAPIVVPKEVPLEKPPEAATETVAAAPIAVGGTGALVPGGVVGGVP GGDTLAGGGGRVAPINLPESGTPPEPLSSNLTPEYPSEARSKGLEGMVILKGVVGVDGRVSQLKVMRGDEPFASAAMAAA KTWRFKPAVVGGQPTAVFRIFKVPFRLKS >Mature_268_residues ASLYARPVMFETFDSGPDVQSARRFALSTTASVAVFALMGIAAVTAAGKVTEVIKEKKGTDVVFRPPPPPPPPPVVEAKP PPPPPPPPKPKLAPKPAPPAAAKAPPPAAPTVAPAPIVVPKEVPLEKPPEAATETVAAAPIAVGGTGALVPGGVVGGVPG GDTLAGGGGRVAPINLPESGTPPEPLSSNLTPEYPSEARSKGLEGMVILKGVVGVDGRVSQLKVMRGDEPFASAAMAAAK TWRFKPAVVGGQPTAVFRIFKVPFRLKS
Specific function: Unknown
COG id: COG0810
COG function: function code M; Periplasmic protein TonB, links inner and outer membranes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27208; Mature: 27077
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLYARPVMFETFDSGPDVQSARRFALSTTASVAVFALMGIAAVTAAGKVTEVIKEKKG CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDVVFRPPPPPPPPPVVEAKPPPPPPPPPKPKLAPKPAPPAAAKAPPPAAPTVAPAPIVV CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC PKEVPLEKPPEAATETVAAAPIAVGGTGALVPGGVVGGVPGGDTLAGGGGRVAPINLPES CCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCEECCCCCCCCEECCCCEEEEEECCCC GTPPEPLSSNLTPEYPSEARSKGLEGMVILKGVVGVDGRVSQLKVMRGDEPFASAAMAAA CCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHH KTWRFKPAVVGGQPTAVFRIFKVPFRLKS HHCCCCCEEECCCCCEEEEEEECCEEECC >Mature Secondary Structure ASLYARPVMFETFDSGPDVQSARRFALSTTASVAVFALMGIAAVTAAGKVTEVIKEKKG CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDVVFRPPPPPPPPPVVEAKPPPPPPPPPKPKLAPKPAPPAAAKAPPPAAPTVAPAPIVV CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC PKEVPLEKPPEAATETVAAAPIAVGGTGALVPGGVVGGVPGGDTLAGGGGRVAPINLPES CCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCEECCCCCCCCEECCCCEEEEEECCCC GTPPEPLSSNLTPEYPSEARSKGLEGMVILKGVVGVDGRVSQLKVMRGDEPFASAAMAAA CCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHH KTWRFKPAVVGGQPTAVFRIFKVPFRLKS HHCCCCCEEECCCCCEEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA