| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is nprT [H]
Identifier: 108762324
GI number: 108762324
Start: 3207432
End: 3209609
Strand: Reverse
Name: nprT [H]
Synonym: MXAN_2754
Alternate gene names: 108762324
Gene position: 3209609-3207432 (Counterclockwise)
Preceding gene: 108763395
Following gene: 108759266
Centisome position: 35.12
GC content: 66.71
Gene sequence:
>2178_bases ATGACGATTCGCCGCACCGAAGGTCCGAAGCCCACGATTCGCTCCACTGCTGCTTCCGAGGCTCAGTCGAAGACGGCCGC GAAGCCCGCGACCATCGCCCCGAACGTCATCAAGGACGGGTTCGGCCCCGCGGCCAAGACGTCGGACCTGGCGCGCGCGG AGAAGACGCTGAAGCCGCTGCCGCCTCCCGTGGGCCGGCTCTCCCTGGAAAGCCGCGAGGCGCAGACCGCCATCCAGACG TCGCTGGCGCACCTGGCCCCCTCCACCCAGACCTCCATCCGCAACCCCGGCATCATCGGCGGCGTGCAGTTCCCGGCGTA CACGCCGAAGAGCGTGGAGCGTGACTCGCTGGGCATGACGCACGTGCGTCTGGACCGCCAGCACGAGGGCGTGAAGGTCT TCGGCGAGCAGGTCGTCACGCACCTCGACGCCGAGGGCAAGGTCAAGAGCACCACCGGCGACCAGTCTGAGATCCCGGCC GGCCTGGGCAAGGAGAAGCCCAAGGTGTCGCACAGCCAGGCGCTGGACATCGCGATGAAGGCGTTCGACGGCAAGCCGGA CCGCCAGCCGAACTCCGAGCGCGTCATCTACAAGGACATCTCCGGTGAGTACCACTCCGCCTACCGGGTGGAAGTCACCA ACGTGGATGGCACCGACAATCCGCGCAAGATGAACTACCTGGTGGACGCCAACACCGGGAAGCTCTTCGAGCAGTTCAAC ACCATTGACGGCTTCGCCCGCCAGCACGGCGCCGCGCATGGCCACACCCACGCCGAAGGCGCGGACCACGCCGACCACGC CCACGGCGCTGCCGCGACGGCTTCCGAGATCAAGGCCTCGGCCACGCCGAAGGCGGAGATCGCCGACCTGGCCACCGTCA CGTCGAAGATCAACGTGACCCAGGACGGCACCGTGGACCAGCTGAAGCTGGACCTGGACATCGACCACACGTTCAAGGGC GACCTGTCGGTCACGCTCACCAGCCCCTCCGGCAAGTCGGAGACGGTGCACAACCGCAAGGGTGGCAGCGCGGACCACAT CAAGGGCAGCTTCGACCTGAGCGGCTTCGCGGGCGAGTCCGCGAAGGGCGAGTGGACGCTGTCGGTGAAGGACAACGCGC GCCGCGACACGGGCACGCTGAACAGCTGGGGCCTGACCATCACCCCGAAGGCCGTTGAGCCCAACGAGCCCGGTCCCGGC GAGAAGATCGCGGACGACACGTCCATGTACAGCGGCAAGGTCGCGCTGGAAACGAAGAAGCAGGCGGACGGCACGTACAC GCTCGAGGACGGCACGCGCGGCAAGGGCGTGGCGACCTACGACGCGATGAACCGCGAGCGCGCCAGCGGCCAGACGCAGA TCAAGGACAACAACGACGTCTGGGGCGAGGCCACGGACCCGGAGCGCAACAAGGCCGCGGTGGACGCGCACTACGGCGGC CAGATGATGTACGACTACATGAAGGACATCCTCGGCCGTGACTCCATCGACGGCGCGGGTGAGAAGCTGGTGTCCTACGT CCACGTCAGCAACAACTACGTGAACGCGTACTGGGACGGCGAGAAGATGAGCTACGGCGACGGCGACGGCCGCAACTCCG GTCCGCTCACCGCGCTGGACATCGCGGGCCATGAGATTGCCCACGGCCTCACCGAGCGCACCGCCGGCCTCATCTACCGC GGCGAGTCCGGTGGTCTGAACGAGGCGATGAGCGACATCATGGGCGCTGGCCTCGAGTGGTACGCGTCCCAGAAGAACCC CGACGTGAAGTTCAACTGGACGGTGGGCGAGACGGCCTGGACGCCGAAGAACGGCGACCCCACCGACGGCCTGCGCTACA TGGACGATCCGACGAAGGACAACTACTCGGTCGACAACTACAAGAACTACCCGAAGCAGACCGAGGTGCACGGCTCCAGC GGCATCGCGAACAACGCCTTCTACCTGCTGACCAACGGCGGAACCAACCGCACGTCCGGCATCGAAGTGAAGGACGCCAT CGGCATGGAGAAGGGCCTGAAGATCTACTACCGCGCCCTGGCTCACTACATGACGCCGAGCACCACGTTCGCCCAGGCCC GCACCGCGACCATCAACGCGGCGACGGACCTCTACGGCGCGGACTCCGCTGAAGTGGCGAAGGTCAAGGAGAGCTGGACC GCCGTCGGCGTGAACTAG
Upstream 100 bases:
>100_bases TTTCGAGAATGGCTTATTGCGTTGAAAATATCGCAAGAAACTCCGCGCCACACTGCGGCGATAACTCTTCAACCCCCTTG CACTGAGTTCGAGACCCCCA
Downstream 100 bases:
>100_bases TCCTCCCGCTTCACTGAAGACACCCGAGCCCGGCCCGGCCCGCGACACACCGCGGACTGGCGCCGGGCTTCGGCTTTCCA GCGGCCGCTCAGGCCGGCGA
Product: M4 family peptidase
Products: NA
Alternate protein names: Thermostable neutral proteinase [H]
Number of amino acids: Translated: 725; Mature: 724
Protein sequence:
>725_residues MTIRRTEGPKPTIRSTAASEAQSKTAAKPATIAPNVIKDGFGPAAKTSDLARAEKTLKPLPPPVGRLSLESREAQTAIQT SLAHLAPSTQTSIRNPGIIGGVQFPAYTPKSVERDSLGMTHVRLDRQHEGVKVFGEQVVTHLDAEGKVKSTTGDQSEIPA GLGKEKPKVSHSQALDIAMKAFDGKPDRQPNSERVIYKDISGEYHSAYRVEVTNVDGTDNPRKMNYLVDANTGKLFEQFN TIDGFARQHGAAHGHTHAEGADHADHAHGAAATASEIKASATPKAEIADLATVTSKINVTQDGTVDQLKLDLDIDHTFKG DLSVTLTSPSGKSETVHNRKGGSADHIKGSFDLSGFAGESAKGEWTLSVKDNARRDTGTLNSWGLTITPKAVEPNEPGPG EKIADDTSMYSGKVALETKKQADGTYTLEDGTRGKGVATYDAMNRERASGQTQIKDNNDVWGEATDPERNKAAVDAHYGG QMMYDYMKDILGRDSIDGAGEKLVSYVHVSNNYVNAYWDGEKMSYGDGDGRNSGPLTALDIAGHEIAHGLTERTAGLIYR GESGGLNEAMSDIMGAGLEWYASQKNPDVKFNWTVGETAWTPKNGDPTDGLRYMDDPTKDNYSVDNYKNYPKQTEVHGSS GIANNAFYLLTNGGTNRTSGIEVKDAIGMEKGLKIYYRALAHYMTPSTTFAQARTATINAATDLYGADSAEVAKVKESWT AVGVN
Sequences:
>Translated_725_residues MTIRRTEGPKPTIRSTAASEAQSKTAAKPATIAPNVIKDGFGPAAKTSDLARAEKTLKPLPPPVGRLSLESREAQTAIQT SLAHLAPSTQTSIRNPGIIGGVQFPAYTPKSVERDSLGMTHVRLDRQHEGVKVFGEQVVTHLDAEGKVKSTTGDQSEIPA GLGKEKPKVSHSQALDIAMKAFDGKPDRQPNSERVIYKDISGEYHSAYRVEVTNVDGTDNPRKMNYLVDANTGKLFEQFN TIDGFARQHGAAHGHTHAEGADHADHAHGAAATASEIKASATPKAEIADLATVTSKINVTQDGTVDQLKLDLDIDHTFKG DLSVTLTSPSGKSETVHNRKGGSADHIKGSFDLSGFAGESAKGEWTLSVKDNARRDTGTLNSWGLTITPKAVEPNEPGPG EKIADDTSMYSGKVALETKKQADGTYTLEDGTRGKGVATYDAMNRERASGQTQIKDNNDVWGEATDPERNKAAVDAHYGG QMMYDYMKDILGRDSIDGAGEKLVSYVHVSNNYVNAYWDGEKMSYGDGDGRNSGPLTALDIAGHEIAHGLTERTAGLIYR GESGGLNEAMSDIMGAGLEWYASQKNPDVKFNWTVGETAWTPKNGDPTDGLRYMDDPTKDNYSVDNYKNYPKQTEVHGSS GIANNAFYLLTNGGTNRTSGIEVKDAIGMEKGLKIYYRALAHYMTPSTTFAQARTATINAATDLYGADSAEVAKVKESWT AVGVN >Mature_724_residues TIRRTEGPKPTIRSTAASEAQSKTAAKPATIAPNVIKDGFGPAAKTSDLARAEKTLKPLPPPVGRLSLESREAQTAIQTS LAHLAPSTQTSIRNPGIIGGVQFPAYTPKSVERDSLGMTHVRLDRQHEGVKVFGEQVVTHLDAEGKVKSTTGDQSEIPAG LGKEKPKVSHSQALDIAMKAFDGKPDRQPNSERVIYKDISGEYHSAYRVEVTNVDGTDNPRKMNYLVDANTGKLFEQFNT IDGFARQHGAAHGHTHAEGADHADHAHGAAATASEIKASATPKAEIADLATVTSKINVTQDGTVDQLKLDLDIDHTFKGD LSVTLTSPSGKSETVHNRKGGSADHIKGSFDLSGFAGESAKGEWTLSVKDNARRDTGTLNSWGLTITPKAVEPNEPGPGE KIADDTSMYSGKVALETKKQADGTYTLEDGTRGKGVATYDAMNRERASGQTQIKDNNDVWGEATDPERNKAAVDAHYGGQ MMYDYMKDILGRDSIDGAGEKLVSYVHVSNNYVNAYWDGEKMSYGDGDGRNSGPLTALDIAGHEIAHGLTERTAGLIYRG ESGGLNEAMSDIMGAGLEWYASQKNPDVKFNWTVGETAWTPKNGDPTDGLRYMDDPTKDNYSVDNYKNYPKQTEVHGSSG IANNAFYLLTNGGTNRTSGIEVKDAIGMEKGLKIYYRALAHYMTPSTTFAQARTATINAATDLYGADSAEVAKVKESWTA VGVN
Specific function: Extracellular zinc metalloprotease [H]
COG id: COG3227
COG function: function code E; Zinc metalloprotease (elastase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M4 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005075 - InterPro: IPR013856 - InterPro: IPR001570 - InterPro: IPR011096 [H]
Pfam domain/function: PF07504 FTP; PF03413 PepSY; PF01447 Peptidase_M4; PF02868 Peptidase_M4_C [H]
EC number: =3.4.24.27 [H]
Molecular weight: Translated: 77862; Mature: 77730
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRRTEGPKPTIRSTAASEAQSKTAAKPATIAPNVIKDGFGPAAKTSDLARAEKTLKPL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCC PPPVGRLSLESREAQTAIQTSLAHLAPSTQTSIRNPGIIGGVQFPAYTPKSVERDSLGMT CCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECEECCCCCCCCCCCCCCCCE HVRLDRQHEGVKVFGEQVVTHLDAEGKVKSTTGDQSEIPAGLGKEKPKVSHSQALDIAMK EEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH AFDGKPDRQPNSERVIYKDISGEYHSAYRVEVTNVDGTDNPRKMNYLVDANTGKLFEQFN HHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHH TIDGFARQHGAAHGHTHAEGADHADHAHGAAATASEIKASATPKAEIADLATVTSKINVT HHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEEEC QDGTVDQLKLDLDIDHTFKGDLSVTLTSPSGKSETVHNRKGGSADHIKGSFDLSGFAGES CCCCCEEEEEEEEECCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKGEWTLSVKDNARRDTGTLNSWGLTITPKAVEPNEPGPGEKIADDTSMYSGKVALETKK CCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCEEEEEECC QADGTYTLEDGTRGKGVATYDAMNRERASGQTQIKDNNDVWGEATDPERNKAAVDAHYGG CCCCEEEECCCCCCCCEEEHHHHCHHHCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCC QMMYDYMKDILGRDSIDGAGEKLVSYVHVSNNYVNAYWDGEKMSYGDGDGRNSGPLTALD HHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCEEEEEECCCEECCCCCCCCCCCCEEEEE IAGHEIAHGLTERTAGLIYRGESGGLNEAMSDIMGAGLEWYASQKNPDVKFNWTVGETAW CCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCEE TPKNGDPTDGLRYMDDPTKDNYSVDNYKNYPKQTEVHGSSGIANNAFYLLTNGGTNRTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC IEVKDAIGMEKGLKIYYRALAHYMTPSTTFAQARTATINAATDLYGADSAEVAKVKESWT EEHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECHHHCCCCCCHHHHHHHHCCE AVGVN EECCC >Mature Secondary Structure TIRRTEGPKPTIRSTAASEAQSKTAAKPATIAPNVIKDGFGPAAKTSDLARAEKTLKPL CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCC PPPVGRLSLESREAQTAIQTSLAHLAPSTQTSIRNPGIIGGVQFPAYTPKSVERDSLGMT CCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECEECCCCCCCCCCCCCCCCE HVRLDRQHEGVKVFGEQVVTHLDAEGKVKSTTGDQSEIPAGLGKEKPKVSHSQALDIAMK EEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH AFDGKPDRQPNSERVIYKDISGEYHSAYRVEVTNVDGTDNPRKMNYLVDANTGKLFEQFN HHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHH TIDGFARQHGAAHGHTHAEGADHADHAHGAAATASEIKASATPKAEIADLATVTSKINVT HHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEEEC QDGTVDQLKLDLDIDHTFKGDLSVTLTSPSGKSETVHNRKGGSADHIKGSFDLSGFAGES CCCCCEEEEEEEEECCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKGEWTLSVKDNARRDTGTLNSWGLTITPKAVEPNEPGPGEKIADDTSMYSGKVALETKK CCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCEEEEEECC QADGTYTLEDGTRGKGVATYDAMNRERASGQTQIKDNNDVWGEATDPERNKAAVDAHYGG CCCCEEEECCCCCCCCEEEHHHHCHHHCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCC QMMYDYMKDILGRDSIDGAGEKLVSYVHVSNNYVNAYWDGEKMSYGDGDGRNSGPLTALD HHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCEEEEEECCCEECCCCCCCCCCCCEEEEE IAGHEIAHGLTERTAGLIYRGESGGLNEAMSDIMGAGLEWYASQKNPDVKFNWTVGETAW CCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCEE TPKNGDPTDGLRYMDDPTKDNYSVDNYKNYPKQTEVHGSSGIANNAFYLLTNGGTNRTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC IEVKDAIGMEKGLKIYYRALAHYMTPSTTFAQARTATINAATDLYGADSAEVAKVKESWT EEHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECHHHCCCCCCHHHHHHHHCCE AVGVN EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2993245 [H]