| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762316
Identifier: 108762316
GI number: 108762316
Start: 76505
End: 77938
Strand: Reverse
Name: 108762316
Synonym: MXAN_0069
Alternate gene names: NA
Gene position: 77938-76505 (Counterclockwise)
Preceding gene: 108757115
Following gene: 108763407
Centisome position: 0.85
GC content: 66.88
Gene sequence:
>1434_bases ATGTACACGTTGGCGGAGATGCGCGCTTTCAGGCTGCGTGACGCGGCGGAGTTGCTGGCACAGCGGGGGTTCGACAACGT CCGGGCCGCGGAACTGGCCCGGGCCACGCGGCTCTCGGTGGGCTCGCTGTATCGTTACTACGGCAGCAAGCAGGGCATCG CGAGGGCGATACGGACCCTCACCGAGCGCGAGCTGTCCTACACGGGTTTCGTCGCCTACCAGATGGCGGATGGCGACCCG CTGCGGCAGGGCTTTCGCGACGTCTTCATCGCCTTCTGGCGCGAGTTCGCGACCTGGGCGCTGTTGCAGCCCCACCTCGT GGGCTTCACCTTCCTTCACAACCATCCGGACACGGACTCACCGGGCGAGCATGACGGACGGACGCGCGCGCAGGTGCTGG AGGTCCTCGAGCATGGCGAGCGCGAGAAGGTGTTTCCCAAGGGCCGCACCTGGCTCCATGAGTGCATGGTGTGGGGCATG CTGTCGGAACTCGTGCGCCGGACGGGCCGGGGCGAGGTGGTGAGCGAAGAAGACGTCGAGACTGCCGCGGAGGTCCTCTG GAAGGCGCTCTCTTTAGATGAGCCCTCCAAGCCTCGAGGTGGTGGCAATCCGCCTCCGGGAGGTGACCACGCGCATCCAG CGCTCACGGCGGACACGTCAGCTCGGACAAGTGGGGCGATGGTCCCCACCGCATCCGCTGAACCCCCTCCAACTGCGACG CGCCTTCGTGCGGCGGCAGGTGACGCACCGCTCTCGCATGCACCTTGCCCCCGGCCGGTCCAGACGGCGCGAAGCCCTGG TCCAGCGGCGTCCACGCCCCTCATCCCTGCGCGGAGGAGCGCGGCTTCCATTCATGCCACATGGCGGCACCATGGCCACC GATGCCCTGCATCAATCGGTGACGACGATGCGGTAGCTGCTGCGCTTGTTCTCGGGCCCCACCCACACGAGCAGCGCTGT CTCACCGGCCTGCTTACCGATGATGCGCAGCACCCCTTTGCCGAGCGCCTTGATGTCCGCAATCTCCGGTTCGTCAATCG CGATGCGGACCATTCCCGGAATTTGAAGGTCGCGATGGCTGCCCTTCTTCACGACCACCGTTTCCTCGGTGGTGGCCGAG GCCCCAGAAGACGGGGCCGGCTTCGACTCCTCCGCCAGCGCAGGCGCTCCCATCAACGCCAGCGCAACCAGGGCAAGGCC CATTCTGTGATGCATGGTGTGTGTCCTCCAAGAGGGGGTTGTTCCACCTTCACCCGGATGACACCGGCCAGGTCGGAGCG TTGCACGCGGCCGCGAAAAAAGTCCGCGGACCCTCAGGAAGCCCCAGGGCTGCTCAGCAGGGACGGCAGGCTCAGGTCCA GCTCTCCCTGTACCACCCGCATCAGGCTGTGCAGTTCGCCGGAGGTGAGCCGAAGCCGCTCCGCCAGCCGCTGA
Upstream 100 bases:
>100_bases ACCCGACCTCCCACCTTGTGTCAGCCCCTCCCTGTAGACAGGTCGTCGTGGAGGGAACGTTCCTTCCACGCGACGGCCGC GAAGGCAGGGGGACGGGCGG
Downstream 100 bases:
>100_bases CGTGTGCCCTCCAGCGCCGCTTCCCGGGCACGGGCCACCCAGCGCGACACGGTGGACTTGTGCGTCTGGTACATGGTGCC GATGCGCTCCAGGCTCAGCC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MYTLAEMRAFRLRDAAELLAQRGFDNVRAAELARATRLSVGSLYRYYGSKQGIARAIRTLTERELSYTGFVAYQMADGDP LRQGFRDVFIAFWREFATWALLQPHLVGFTFLHNHPDTDSPGEHDGRTRAQVLEVLEHGEREKVFPKGRTWLHECMVWGM LSELVRRTGRGEVVSEEDVETAAEVLWKALSLDEPSKPRGGGNPPPGGDHAHPALTADTSARTSGAMVPTASAEPPPTAT RLRAAAGDAPLSHAPCPRPVQTARSPGPAASTPLIPARRSAASIHATWRHHGHRCPASIGDDDAVAAALVLGPHPHEQRC LTGLLTDDAQHPFAERLDVRNLRFVNRDADHSRNLKVAMAALLHDHRFLGGGRGPRRRGRLRLLRQRRRSHQRQRNQGKA HSVMHGVCPPRGGCSTFTRMTPARSERCTRPRKKSADPQEAPGLLSRDGRLRSSSPCTTRIRLCSSPEVSRSRSASR
Sequences:
>Translated_477_residues MYTLAEMRAFRLRDAAELLAQRGFDNVRAAELARATRLSVGSLYRYYGSKQGIARAIRTLTERELSYTGFVAYQMADGDP LRQGFRDVFIAFWREFATWALLQPHLVGFTFLHNHPDTDSPGEHDGRTRAQVLEVLEHGEREKVFPKGRTWLHECMVWGM LSELVRRTGRGEVVSEEDVETAAEVLWKALSLDEPSKPRGGGNPPPGGDHAHPALTADTSARTSGAMVPTASAEPPPTAT RLRAAAGDAPLSHAPCPRPVQTARSPGPAASTPLIPARRSAASIHATWRHHGHRCPASIGDDDAVAAALVLGPHPHEQRC LTGLLTDDAQHPFAERLDVRNLRFVNRDADHSRNLKVAMAALLHDHRFLGGGRGPRRRGRLRLLRQRRRSHQRQRNQGKA HSVMHGVCPPRGGCSTFTRMTPARSERCTRPRKKSADPQEAPGLLSRDGRLRSSSPCTTRIRLCSSPEVSRSRSASR >Mature_477_residues MYTLAEMRAFRLRDAAELLAQRGFDNVRAAELARATRLSVGSLYRYYGSKQGIARAIRTLTERELSYTGFVAYQMADGDP LRQGFRDVFIAFWREFATWALLQPHLVGFTFLHNHPDTDSPGEHDGRTRAQVLEVLEHGEREKVFPKGRTWLHECMVWGM LSELVRRTGRGEVVSEEDVETAAEVLWKALSLDEPSKPRGGGNPPPGGDHAHPALTADTSARTSGAMVPTASAEPPPTAT RLRAAAGDAPLSHAPCPRPVQTARSPGPAASTPLIPARRSAASIHATWRHHGHRCPASIGDDDAVAAALVLGPHPHEQRC LTGLLTDDAQHPFAERLDVRNLRFVNRDADHSRNLKVAMAALLHDHRFLGGGRGPRRRGRLRLLRQRRRSHQRQRNQGKA HSVMHGVCPPRGGCSTFTRMTPARSERCTRPRKKSADPQEAPGLLSRDGRLRSSSPCTTRIRLCSSPEVSRSRSASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52721; Mature: 52721
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTLAEMRAFRLRDAAELLAQRGFDNVRAAELARATRLSVGSLYRYYGSKQGIARAIRTL CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TERELSYTGFVAYQMADGDPLRQGFRDVFIAFWREFATWALLQPHLVGFTFLHNHPDTDS HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC PGEHDGRTRAQVLEVLEHGEREKVFPKGRTWLHECMVWGMLSELVRRTGRGEVVSEEDVE CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH TAAEVLWKALSLDEPSKPRGGGNPPPGGDHAHPALTADTSARTSGAMVPTASAEPPPTAT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHH RLRAAAGDAPLSHAPCPRPVQTARSPGPAASTPLIPARRSAASIHATWRHHGHRCPASIG HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC DDDAVAAALVLGPHPHEQRCLTGLLTDDAQHPFAERLDVRNLRFVNRDADHSRNLKVAMA CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCCCCCHHHHHH ALLHDHRFLGGGRGPRRRGRLRLLRQRRRSHQRQRNQGKAHSVMHGVCPPRGGCSTFTRM HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHC TPARSERCTRPRKKSADPQEAPGLLSRDGRLRSSSPCTTRIRLCSSPEVSRSRSASR CCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCC >Mature Secondary Structure MYTLAEMRAFRLRDAAELLAQRGFDNVRAAELARATRLSVGSLYRYYGSKQGIARAIRTL CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TERELSYTGFVAYQMADGDPLRQGFRDVFIAFWREFATWALLQPHLVGFTFLHNHPDTDS HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC PGEHDGRTRAQVLEVLEHGEREKVFPKGRTWLHECMVWGMLSELVRRTGRGEVVSEEDVE CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH TAAEVLWKALSLDEPSKPRGGGNPPPGGDHAHPALTADTSARTSGAMVPTASAEPPPTAT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHH RLRAAAGDAPLSHAPCPRPVQTARSPGPAASTPLIPARRSAASIHATWRHHGHRCPASIG HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC DDDAVAAALVLGPHPHEQRCLTGLLTDDAQHPFAERLDVRNLRFVNRDADHSRNLKVAMA CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHCCCCCCCCCHHHHHH ALLHDHRFLGGGRGPRRRGRLRLLRQRRRSHQRQRNQGKAHSVMHGVCPPRGGCSTFTRM HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHC TPARSERCTRPRKKSADPQEAPGLLSRDGRLRSSSPCTTRIRLCSSPEVSRSRSASR CCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA