| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is relA [H]
Identifier: 108762300
GI number: 108762300
Start: 3752571
End: 3754832
Strand: Direct
Name: relA [H]
Synonym: MXAN_3204
Alternate gene names: 108762300
Gene position: 3752571-3754832 (Clockwise)
Preceding gene: 108760153
Following gene: 108763061
Centisome position: 41.06
GC content: 64.19
Gene sequence:
>2262_bases TTGCCCCTCCGTTGGTGCAAAGTTACGATTGCTCCTCATTCGATGATTCGCCTGAACGACATCCTCCAACGGGTTTCCCA GTACCACCCCGACCCCGACCTGGACATCATCAAGAAGGCCTACGTCTATTCGGCCAAGGTCCATCAGGGTCAACTCCGGA AGTCAGGCGAGCCCTACCTCGTCCATCCGCTCGAGGTCGCCGGCATCCTGGGCGAGCTCAAGCTGGACGAGGCGTCCATC GTCACCGGACTCCTTCACGACACCATTGAGGACACGCTGGCCACCGAGGAGGAGCTGACGGAGCTCTTCGGTTCGGAAGT AGCCCACCTGGTAGACGGCGTCACCAAGCTGTCCAAGTTCTCCGCATCCGCCAGCCTGTCGCAGGAGGAGAAGCAGGCGG AGAACTTCCGGAAGATGATCATCGCGATGGCGCAGGACATCCGCGTCATCCTGGTGAAGCTGGCGGACCGCACGCACAAC ATGCGGACGTTGGATCACATGTCGGAGGAGAAGCAGGCCCGCATCGCGCAGGAGACGCTGGACATCTACGCGCCGCTGGC CAACCGGCTGGGCATCTCGTGGATCAAGACGGAGCTGGAGGACCTGAGCTTCCGCTACGTCAAACCGCAGGAGTTCTTCG CGCTCCAGGCGAAGCTGAACAAGCGCAAGAAGGAGCGGGAGAAGTACATCGAGGACACGTGCGACCTCATCCGCTCCAAG CTGGCCGAGCGCGGGCTGAAGGGCGAGGTGAGCGGACGCTTCAAGCACGTCTACAGCATCTACAAGAAGATCAAGTCACA GGGCATCGACTTCGATCAGATCCACGACATCATCGCCTTTCGCATCATCGCGCCCACCGCGCCCTCCTGTTACGAGGCGC TGGGGCTCGTGCACGAGATGTGGAAGCCGGTGCCGGGGCGCTTCAAGGACTTCATCGCGATTCCGAAGCCCAACATGTAC CAGTCGCTGCACACGACCATCATCGGTCCGCTCAGCGAGCGCGTGGAGGTGCAGATCCGCACCTCGGAGATGCACAAGAT CGCCGAGGAAGGCATCGCCGCGCACTGGAAGTACAAGGAGGGCAAGGCCGTCATCTCCAAGGATGACGAGAAGTTCGCCT GGCTGCGGCAGCTGATGGAGTGGCAGCAGGACCTGAAGGACCCGAAGGAGTTCCTGGAGACGGTGAAGGTGGACCTCTTC ACCGACGAGGTCTTCGTCTTCACGCCCAAGGGCGACGTGCGCTCGCTGCCTCGCGGCGCCACGCCGGTGGACTTCGCCTA CGCCATCCATTCGGACGTGGGCAACCGGTGCGTGGGCGCCAAGGTGAACGGGAAGATCGTCCCGCTCCGCTACAAGATGA AGAACGGGGACACGGTGGAGGTGCTCACCAGCCCCCAGCAGCACCCGTCCAAGGATTGGCTCACCTTCGTCAAGACGAGC CGGGCGCAGCAGCGCATCCGCGGCTTCATCAAGCAGCAGCAGCGCGAGAAGAGCCTTCAGCTGGGACGCGAGCTGGCGGA CCGCGAGCTCAAGCGCTTCCAGCTCAACTTCAACCGGTTGCTCAAGTCCGGCGAGATGAAGAAGGCCGCCGTGGACCTGG GCTTCCGTGTGGAAGACGACATGCTGGTGGCCATTGGCTACGGCAAGGTGACGCCGCAGCAGCTGTCGCACCGGCTCGTC CCCCAGGAGAAGCTCAACGCCGCGGAGGCCGGGGGGCGCGCGGATGCCAACCCCGCCGCGACAACCTCCGGTGGAGCCGG CAACTCGGTGCTGCCGGGCCTGTCCCGGGTCACCGACCTGGCGAAGCGGCTGGTGGGCCGCAGCAACCGCAGCGGCGTAC AGATTGGCGGCGTGGACGATGTCCTCGTGCGCTTCGGGCGGTGTTGCAACCCCGTCCCCGGAGATCCCATCGCCGGCTTC ATCACCCGGGGGCGGGGCGTCACGGTTCACACGGTCGGCTGTGAAAAGGCACTGGCCACGGACCCCGAGCGGCGCGTGGA CGTGTCGTGGGACGTCCGGGGCGACTTCAAGCGCCCCGTCACCCTGCGCGTCCTCACTGCGGACCGGCCGGGCCTGCTGG CGGACATCACCAACACCTTCTCCAAGAAGGGCGTCAACATCTCCCAGGCCAACTGCCGGGCCACCGGAGATGACCGGGCG GTGAACACTTTCGAGGTCATCATCTCCGACCTCAAGCAGCTCACCGACCTGATGCGAACCATCGAGCGGCTCCAGGGCGT CTACTCGGTCGAGCGCATCTAA
Upstream 100 bases:
>100_bases CGGAGGCGAATCTACGGGGCCGTAAAACACCGGGTCAACGAAAGCGAACGCACCAACTGGGGTGTCCTAGAGGAAGGTGA CGTCCAGGTGTGGGGCAACG
Downstream 100 bases:
>100_bases CCGCCTTCGCCTTTCGTGGTAGAGCGCCCGGAAACCCCGGCGGCCCGATTCGGGCCGCTCTCACCCCGAGGTGCGCCGCA TGGCTCGCAAGGCAATCCAC
Product: GTP pyrophosphokinase
Products: NA
Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MPLRWCKVTIAPHSMIRLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASI VTGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSKFSASASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHN MRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSK LAERGLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMY QSLHTTIIGPLSERVEVQIRTSEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEWQQDLKDPKEFLETVKVDLF TDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIVPLRYKMKNGDTVEVLTSPQQHPSKDWLTFVKTS RAQQRIRGFIKQQQREKSLQLGRELADRELKRFQLNFNRLLKSGEMKKAAVDLGFRVEDDMLVAIGYGKVTPQQLSHRLV PQEKLNAAEAGGRADANPAATTSGGAGNSVLPGLSRVTDLAKRLVGRSNRSGVQIGGVDDVLVRFGRCCNPVPGDPIAGF ITRGRGVTVHTVGCEKALATDPERRVDVSWDVRGDFKRPVTLRVLTADRPGLLADITNTFSKKGVNISQANCRATGDDRA VNTFEVIISDLKQLTDLMRTIERLQGVYSVERI
Sequences:
>Translated_753_residues MPLRWCKVTIAPHSMIRLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASI VTGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSKFSASASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHN MRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSK LAERGLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMY QSLHTTIIGPLSERVEVQIRTSEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEWQQDLKDPKEFLETVKVDLF TDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIVPLRYKMKNGDTVEVLTSPQQHPSKDWLTFVKTS RAQQRIRGFIKQQQREKSLQLGRELADRELKRFQLNFNRLLKSGEMKKAAVDLGFRVEDDMLVAIGYGKVTPQQLSHRLV PQEKLNAAEAGGRADANPAATTSGGAGNSVLPGLSRVTDLAKRLVGRSNRSGVQIGGVDDVLVRFGRCCNPVPGDPIAGF ITRGRGVTVHTVGCEKALATDPERRVDVSWDVRGDFKRPVTLRVLTADRPGLLADITNTFSKKGVNISQANCRATGDDRA VNTFEVIISDLKQLTDLMRTIERLQGVYSVERI >Mature_752_residues PLRWCKVTIAPHSMIRLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIV TGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSKFSASASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNM RTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKL AERGLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQ SLHTTIIGPLSERVEVQIRTSEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEWQQDLKDPKEFLETVKVDLFT DEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIVPLRYKMKNGDTVEVLTSPQQHPSKDWLTFVKTSR AQQRIRGFIKQQQREKSLQLGRELADRELKRFQLNFNRLLKSGEMKKAAVDLGFRVEDDMLVAIGYGKVTPQQLSHRLVP QEKLNAAEAGGRADANPAATTSGGAGNSVLPGLSRVTDLAKRLVGRSNRSGVQIGGVDDVLVRFGRCCNPVPGDPIAGFI TRGRGVTVHTVGCEKALATDPERRVDVSWDVRGDFKRPVTLRVLTADRPGLLADITNTFSKKGVNISQANCRATGDDRAV NTFEVIISDLKQLTDLMRTIERLQGVYSVERI
Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Escherichia coli, GI1790082, Length=753, Percent_Identity=40.5046480743692, Blast_Score=540, Evalue=1e-154, Organism=Escherichia coli, GI1789147, Length=729, Percent_Identity=36.8998628257888, Blast_Score=486, Evalue=1e-138,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR012675 - InterPro: IPR003607 - InterPro: IPR007685 - InterPro: IPR004811 - InterPro: IPR004095 - InterPro: IPR012676 [H]
Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]
EC number: =2.7.6.5 [H]
Molecular weight: Translated: 84739; Mature: 84607
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRWCKVTIAPHSMIRLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYL CCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VHPLEVAGILGELKLDEASIVTGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSKF ECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SASASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSK HHHHHHHHHCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAERGLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIAPTAPSCYEALGLVHEM HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHH WKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSERVEVQIRTSEMHKIAEEGIAAHWKYKE HCCCCCCHHHEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECC GKAVISKDDEKFAWLRQLMEWQQDLKDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGA CCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCEEEECCCCCHHCCCCCC TPVDFAYAIHSDVGNRCVGAKVNGKIVPLRYKMKNGDTVEVLTSPQQHPSKDWLTFVKTS CCHHHHHHHHHCCCCCEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHH RAQQRIRGFIKQQQREKSLQLGRELADRELKRFQLNFNRLLKSGEMKKAAVDLGFRVEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECCC MLVAIGYGKVTPQQLSHRLVPQEKLNAAEAGGRADANPAATTSGGAGNSVLPGLSRVTDL EEEEEECCCCCHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AKRLVGRSNRSGVQIGGVDDVLVRFGRCCNPVPGDPIAGFITRGRGVTVHTVGCEKALAT HHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHCC DPERRVDVSWDVRGDFKRPVTLRVLTADRPGLLADITNTFSKKGVNISQANCRATGDDRA CCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCC VNTFEVIISDLKQLTDLMRTIERLQGVYSVERI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLRWCKVTIAPHSMIRLNDILQRVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYL CCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VHPLEVAGILGELKLDEASIVTGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSKF ECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SASASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSK HHHHHHHHHCCHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAERGLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFRIIAPTAPSCYEALGLVHEM HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHH WKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSERVEVQIRTSEMHKIAEEGIAAHWKYKE HCCCCCCHHHEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECC GKAVISKDDEKFAWLRQLMEWQQDLKDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGA CCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCEEEECCCCCHHCCCCCC TPVDFAYAIHSDVGNRCVGAKVNGKIVPLRYKMKNGDTVEVLTSPQQHPSKDWLTFVKTS CCHHHHHHHHHCCCCCEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHH RAQQRIRGFIKQQQREKSLQLGRELADRELKRFQLNFNRLLKSGEMKKAAVDLGFRVEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECCC MLVAIGYGKVTPQQLSHRLVPQEKLNAAEAGGRADANPAATTSGGAGNSVLPGLSRVTDL EEEEEECCCCCHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AKRLVGRSNRSGVQIGGVDDVLVRFGRCCNPVPGDPIAGFITRGRGVTVHTVGCEKALAT HHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHCC DPERRVDVSWDVRGDFKRPVTLRVLTADRPGLLADITNTFSKKGVNISQANCRATGDDRA CCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCC VNTFEVIISDLKQLTDLMRTIERLQGVYSVERI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA