| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762225
Identifier: 108762225
GI number: 108762225
Start: 5036526
End: 5037038
Strand: Reverse
Name: 108762225
Synonym: MXAN_4091
Alternate gene names: NA
Gene position: 5037038-5036526 (Counterclockwise)
Preceding gene: 108762867
Following gene: 108762956
Centisome position: 55.11
GC content: 71.15
Gene sequence:
>513_bases ATGTCTGAGCACGTGTCCCCCCAGGAGCTGCGTAGGAAGTGGAAGCTGGCGAACGCGGAGCCGCTGGAGGGCGGTCACCG GCTCGAGGCGTACCGCGCGCTGGCGCAGAGCTGTCCCGCGTTCGTTCCCAATCTCCTGTCGTTGAGCCGCACGTTGCTGG CCGGCCGGAACGAAGCGGCGGACCCGGAGGCCGCGGTGTCTGAGGCCGAGCAGGTGCTCCGCTCCGCGTCGGACGTCTCC GCGGGGGCCCCGGAGCCCCTGCTGGCGCTGGGACATTTCCTCGTCTCAGTGCGACAGGCGCCCGATGAGGCGGAGCGCGC CTTCTCCTCCGCGGCCAGCGCCGCGATGGCCTTGCTGGAGGAAGCGTGGGCGGGCTGGATTCACGCGCTGGGCGCGCAGG GACAACTGGAGGCGGCGCTGGAGGTGGAGGAACGGGCGCGGAGCCTCTTTCCCAGCTCCAAGGCGATTTCTCAGGCGGTG GCGTTCGCGCGAGCGCAGTCGGGTACGCGCTGA
Upstream 100 bases:
>100_bases CGGCGGAGACGTACTCCAGTCTGCACTGGGGCATCACCGCGTCCTACTGAGGCGCGTTGTCGGCTCCCACTCTGGCGCGG CGGAGGCGTAGGGTGCGGAC
Downstream 100 bases:
>100_bases CGCGGGGCCCGCCACGTCAGGGCAGGCGCTCCAGCGAACTCCGGCCGCCGGTCCGCACGGCCTGACGGTGCTGGGCAATC CGGTTGCGGGCCCACTCCGG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: ORFY
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSEHVSPQELRRKWKLANAEPLEGGHRLEAYRALAQSCPAFVPNLLSLSRTLLAGRNEAADPEAAVSEAEQVLRSASDVS AGAPEPLLALGHFLVSVRQAPDEAERAFSSAASAAMALLEEAWAGWIHALGAQGQLEAALEVEERARSLFPSSKAISQAV AFARAQSGTR
Sequences:
>Translated_170_residues MSEHVSPQELRRKWKLANAEPLEGGHRLEAYRALAQSCPAFVPNLLSLSRTLLAGRNEAADPEAAVSEAEQVLRSASDVS AGAPEPLLALGHFLVSVRQAPDEAERAFSSAASAAMALLEEAWAGWIHALGAQGQLEAALEVEERARSLFPSSKAISQAV AFARAQSGTR >Mature_169_residues SEHVSPQELRRKWKLANAEPLEGGHRLEAYRALAQSCPAFVPNLLSLSRTLLAGRNEAADPEAAVSEAEQVLRSASDVSA GAPEPLLALGHFLVSVRQAPDEAERAFSSAASAAMALLEEAWAGWIHALGAQGQLEAALEVEERARSLFPSSKAISQAVA FARAQSGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YCRS_MYXXA (Q06929)
Other databases:
- EMBL: X71062 - PIR: S39880 - GO: GO:0005488 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18052; Mature: 17921
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHVSPQELRRKWKLANAEPLEGGHRLEAYRALAQSCPAFVPNLLSLSRTLLAGRNEAA CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC DPEAAVSEAEQVLRSASDVSAGAPEPLLALGHFLVSVRQAPDEAERAFSSAASAAMALLE CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EAWAGWIHALGAQGQLEAALEVEERARSLFPSSKAISQAVAFARAQSGTR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEHVSPQELRRKWKLANAEPLEGGHRLEAYRALAQSCPAFVPNLLSLSRTLLAGRNEAA CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC DPEAAVSEAEQVLRSASDVSAGAPEPLLALGHFLVSVRQAPDEAERAFSSAASAAMALLE CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EAWAGWIHALGAQGQLEAALEVEERARSLFPSSKAISQAVAFARAQSGTR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934835