| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762221
Identifier: 108762221
GI number: 108762221
Start: 6538038
End: 6538706
Strand: Direct
Name: 108762221
Synonym: MXAN_5241
Alternate gene names: NA
Gene position: 6538038-6538706 (Clockwise)
Preceding gene: 108758453
Following gene: 108759556
Centisome position: 71.53
GC content: 67.12
Gene sequence:
>669_bases ATGGGTGTAGGAGCTTCCATGTCCAACTACCGCATCCGTCCCAACGATACCCTCTCCGGCCTGGCGGCCCGTTTCGGCAC CACGGTGGAGAAGCTGGCCCGTGACAACAACATCACGAACCCCGACCTCATCTACGCGGGGAACACGCTGCGCATCGGGC ACTCCGGTCGTGACAGCTTCGACGCCGGAGGCGGCCGTCAGGGCGTTCGCGGTGGAGGCCCCTCTGGTGGCGTGAGCGGT GGAGCGGACGTCGGCGGCCCGACGGGCGCGGGGCCCAGCAACGCGTCTGACGCGATGCGTCGACTGGCGGATGCGGCCCG CTCGGCGGCCATGGGCATGGGCGGCTACAACAGCCAGGGCCTGTGCGCCACGGGCGTCAGCCGGGCCATCCGCAATTCCC TGGGCATTGGCGTGTCGGGCAACGGCAACCAGATTGACAACAACCTCCCGCGCGACAAGTTCAAGCAGGTCAACATGTCG CTGGAGGAGGCGCTGAAGATTCCGGGCCTCGTCCTCACCTGGGAGAGCACCTCCACGCGCCTGGGCAGCATCTACGGCCA CACGGCCGTCACCCTGGGTGATGGTCACTCGTCCGCGAGCGACTTCATCGAGCGCAACACGACCAACAGCGGGCGCACGG GCTTCAAGGTCTTCATGCCCATCGTGTAG
Upstream 100 bases:
>100_bases TGGAGAGGCACGAGCGTCGCTCTGGGTGAAATCTCGAGACTCCCCAAACAATCCAAGAATCTTGGAAGGGTGAAGCAACT CCACCGGGGAAGTCGCGAGA
Downstream 100 bases:
>100_bases TGCCTGCTGCGCAGAAGGCATCCCTGGAAGCCCCTGGCCCTGTAGAGGGTCGGGGGCTTCGTCGTTTCCAGCGGAGGGAA AACGCGGGACGTGCGCTGCG
Product: LysM domain-containing protein
Products: NA
Alternate protein names: Penicillin-Resistant Dd-Carboxypeptidase-Like Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MGVGASMSNYRIRPNDTLSGLAARFGTTVEKLARDNNITNPDLIYAGNTLRIGHSGRDSFDAGGGRQGVRGGGPSGGVSG GADVGGPTGAGPSNASDAMRRLADAARSAAMGMGGYNSQGLCATGVSRAIRNSLGIGVSGNGNQIDNNLPRDKFKQVNMS LEEALKIPGLVLTWESTSTRLGSIYGHTAVTLGDGHSSASDFIERNTTNSGRTGFKVFMPIV
Sequences:
>Translated_222_residues MGVGASMSNYRIRPNDTLSGLAARFGTTVEKLARDNNITNPDLIYAGNTLRIGHSGRDSFDAGGGRQGVRGGGPSGGVSG GADVGGPTGAGPSNASDAMRRLADAARSAAMGMGGYNSQGLCATGVSRAIRNSLGIGVSGNGNQIDNNLPRDKFKQVNMS LEEALKIPGLVLTWESTSTRLGSIYGHTAVTLGDGHSSASDFIERNTTNSGRTGFKVFMPIV >Mature_221_residues GVGASMSNYRIRPNDTLSGLAARFGTTVEKLARDNNITNPDLIYAGNTLRIGHSGRDSFDAGGGRQGVRGGGPSGGVSGG ADVGGPTGAGPSNASDAMRRLADAARSAAMGMGGYNSQGLCATGVSRAIRNSLGIGVSGNGNQIDNNLPRDKFKQVNMSL EEALKIPGLVLTWESTSTRLGSIYGHTAVTLGDGHSSASDFIERNTTNSGRTGFKVFMPIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22765; Mature: 22633
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGASMSNYRIRPNDTLSGLAARFGTTVEKLARDNNITNPDLIYAGNTLRIGHSGRDSF CCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCC DAGGGRQGVRGGGPSGGVSGGADVGGPTGAGPSNASDAMRRLADAARSAAMGMGGYNSQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LCATGVSRAIRNSLGIGVSGNGNQIDNNLPRDKFKQVNMSLEEALKIPGLVLTWESTSTR CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCEEEEECCCCCH LGSIYGHTAVTLGDGHSSASDFIERNTTNSGRTGFKVFMPIV HHHEECCEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCC >Mature Secondary Structure GVGASMSNYRIRPNDTLSGLAARFGTTVEKLARDNNITNPDLIYAGNTLRIGHSGRDSF CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCC DAGGGRQGVRGGGPSGGVSGGADVGGPTGAGPSNASDAMRRLADAARSAAMGMGGYNSQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LCATGVSRAIRNSLGIGVSGNGNQIDNNLPRDKFKQVNMSLEEALKIPGLVLTWESTSTR CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCEEEEECCCCCH LGSIYGHTAVTLGDGHSSASDFIERNTTNSGRTGFKVFMPIV HHHEECCEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA