| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mutB [H]
Identifier: 108762175
GI number: 108762175
Start: 2623953
End: 2626145
Strand: Reverse
Name: mutB [H]
Synonym: MXAN_2263
Alternate gene names: 108762175
Gene position: 2626145-2623953 (Counterclockwise)
Preceding gene: 108758002
Following gene: 108761298
Centisome position: 28.73
GC content: 69.04
Gene sequence:
>2193_bases ATGCGCCCCCACGTACCGGACTTCTCGGGCATCGACTTCGACGCCCCCGAAACGCACTCCGCCGCGCCCATGCGCGACCA GCAACTGCGTCAGGCCGGCGAGGCCACGCGCAACGCCGAGCGCTGGGACACGCCCGAGGGCATCCCCGTCAAGCCGGTGT ACACGCGAGAGGACATGGAGGGCGTGGAGCACCTGGGCTCGCTGCCGGGCCTGCCGCCCTTCGTGCGCGGCCCCTACTCC ACCATGTACGTGCAGCAGCCGTGGACGGTGCGGCAGTACGCCGGCTTCTCCACGGCCGAGGCCTCCAACGCCTTCTACCG CCGAAACCTCGCGGCGGGACAGAAGGGCCTGTCCATCGCCTTCGACCTCGCGACGCACCGGGGCTACGACAGCGACCATC CCCGCGTGGCGGGTGACGTGGGCATGGCGGGCGTGGCCATCGACTCCATCAAGGACATGCGCATCCTGTTCGACCGGATT CCGCTCGACCAGATGAGCGTGTCCATGACGATGAACGGGGCCGTGCTCCCGGTGCTGGCGCTCTACGTGGTCGCCGCCGA GGAGCAAGGCGTGCGCCCCGAGCAGCTCAGCGGGACCATCCAGAACGACATCCTCAAGGAGTTCATGGTCCGCAACACGT ACATCTACCCGCCCGCTCCGTCGATGCGCATCATCGGCGACATCTTCCGCTTCACGGCGGAGAAGATGCCGCGCTTCAAC AGCATCAGCATCAGCGGCTACCACATGCAGGAAGCCGGGGCGACGCAGGACCTGGAGCTGGGCTACACGCTGGCGGATGG CGTGGAGTACGTGCGCGCCGGGCTCGCGGCGGGACTGAGCGTGGACGCCTTCGCGCCGCGCCTGTCCTTCTTCTGGGCCA TTGGCATGAACTTCTTCATGGAAGTGGCCAAGATGCGCGCCGCCCGCCTGCTCTGGGCGAAGCTCATCAAGGGCTTCTCC CCGAAGACGGACAAGAGCCTGGCGCTGCGCACCCACAGCCAGACGTCGGGATGGAGCCTCACCGCGCAGGACGTCTTCAA CAATGTCGTGCGCACCTGCGTGGAGGCCATGGCCGCCACCCAGGGCCACACGCAGAGCCTGCACACCAACTCGCTGGACG AGGCCATCGCGCTGCCCACCGACTTCAGCGCGCGCATCGCCCGCAACACCCAGCTCTATCTCCAGTTGGAGAGCGGCACC ACGCGCGTCATCGACCCGTGGGGTGGCAGCTACTACGTGGAGCGCCTCACGCACGAACTGGCGCACAAGGCGTGGGCCCA CATCCAGGAGGTCGAGGCGCTGGGCGGCATGACGAAGGCCATCGAGGCCGGCCTGCCCAAGCTGCGCATCGAGGAGGCGG CGGCGCGCACCCAGGCGCGCATCGACTCCGGCCGCCAGGCCATCATCGGCGTGAACAAGTACCCGCCCGAGCGCGAGGAC TCCATCGAGATTCTCAAAGTGGACAACTCGGCGGTGCGCGAGGCGCAGATTGCCCGGCTGCGCGAGCTGCGCGCCGAGCG CAACGCGGAGGACGTCCGCCGCAAGCTGGACGCGCTCACCGAGGCGGGACGGCGCGGCGAGGGCAACCTGCTGGCACTGG CCATCGACGCGGCCCGCGCCAAGGCGACGGTGGGCGAAATCAGCGACGCGCTCGAGAAGGTGTTCGGGCGCTACGAGGCC ACGGTGCGCAGCGTGACGGGTGTGTATTCCAGCGAAGCGGGCAAGGACGCTCAGGGAATCATCGACGCGCGCGAGAAGGC GGACGCGTTCCTCGCGCGCTTCGGCCGCCGGCCGCGCATCCTCATCGCGAAGATGGGGCAGGACGGACATGACCGCGGCC AGAAGGTCATCGCCACCGCGTTCGCGGACCTGGGCTTCGACGTGGACATCGGTCCCCTGTTCCAGACGCCCGAGGAGTCC GCGCGGCAGGCGGTGGAGAACGACGTGCACGTCGTGGGCGCCAGCTCGCTCGCCGCCGGCCACCTGACGCTGGTGCCGCA ACTCAAGCAGGCCCTCAAGGCGCTGGGCCGTGAGGACATCATGGTCGTCGTGGGCGGCGTCATCCCCGCGCAGGACTACG ACGCGCTTCGCGCCGCGGGCGCCGCGGCCATCTTCGGCCCTGGCACGGTCATCTCCAAGGCGGCCATCGAACTGCTCGAC AAGCTGGCCGCGTCGCTGGAGGAAGAGGCGTGA
Upstream 100 bases:
>100_bases AGGCCGCCTTCCGCGCGGCCGGCGTGGACGTCTTCTTCTACGCGGGAGCGGACCTGTTCGCGCTCCTGTCCTCACTGCAC CAGCAGCTCGGAGTGGCCTG
Downstream 100 bases:
>100_bases AGCTGCTGTCCGCGGACGCGTATGTAGACGGTGTGCGCGCGGGTGACCGCGCCATGCTCGCGCGCACCATCACCCTGGTG GAGAGCGAGCTGCCGCGCCA
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MRPHVPDFSGIDFDAPETHSAAPMRDQQLRQAGEATRNAERWDTPEGIPVKPVYTREDMEGVEHLGSLPGLPPFVRGPYS TMYVQQPWTVRQYAGFSTAEASNAFYRRNLAAGQKGLSIAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIKDMRILFDRI PLDQMSVSMTMNGAVLPVLALYVVAAEEQGVRPEQLSGTIQNDILKEFMVRNTYIYPPAPSMRIIGDIFRFTAEKMPRFN SISISGYHMQEAGATQDLELGYTLADGVEYVRAGLAAGLSVDAFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKLIKGFS PKTDKSLALRTHSQTSGWSLTAQDVFNNVVRTCVEAMAATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQLESGT TRVIDPWGGSYYVERLTHELAHKAWAHIQEVEALGGMTKAIEAGLPKLRIEEAAARTQARIDSGRQAIIGVNKYPPERED SIEILKVDNSAVREAQIARLRELRAERNAEDVRRKLDALTEAGRRGEGNLLALAIDAARAKATVGEISDALEKVFGRYEA TVRSVTGVYSSEAGKDAQGIIDAREKADAFLARFGRRPRILIAKMGQDGHDRGQKVIATAFADLGFDVDIGPLFQTPEES ARQAVENDVHVVGASSLAAGHLTLVPQLKQALKALGREDIMVVVGGVIPAQDYDALRAAGAAAIFGPGTVISKAAIELLD KLAASLEEEA
Sequences:
>Translated_730_residues MRPHVPDFSGIDFDAPETHSAAPMRDQQLRQAGEATRNAERWDTPEGIPVKPVYTREDMEGVEHLGSLPGLPPFVRGPYS TMYVQQPWTVRQYAGFSTAEASNAFYRRNLAAGQKGLSIAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIKDMRILFDRI PLDQMSVSMTMNGAVLPVLALYVVAAEEQGVRPEQLSGTIQNDILKEFMVRNTYIYPPAPSMRIIGDIFRFTAEKMPRFN SISISGYHMQEAGATQDLELGYTLADGVEYVRAGLAAGLSVDAFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKLIKGFS PKTDKSLALRTHSQTSGWSLTAQDVFNNVVRTCVEAMAATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQLESGT TRVIDPWGGSYYVERLTHELAHKAWAHIQEVEALGGMTKAIEAGLPKLRIEEAAARTQARIDSGRQAIIGVNKYPPERED SIEILKVDNSAVREAQIARLRELRAERNAEDVRRKLDALTEAGRRGEGNLLALAIDAARAKATVGEISDALEKVFGRYEA TVRSVTGVYSSEAGKDAQGIIDAREKADAFLARFGRRPRILIAKMGQDGHDRGQKVIATAFADLGFDVDIGPLFQTPEES ARQAVENDVHVVGASSLAAGHLTLVPQLKQALKALGREDIMVVVGGVIPAQDYDALRAAGAAAIFGPGTVISKAAIELLD KLAASLEEEA >Mature_730_residues MRPHVPDFSGIDFDAPETHSAAPMRDQQLRQAGEATRNAERWDTPEGIPVKPVYTREDMEGVEHLGSLPGLPPFVRGPYS TMYVQQPWTVRQYAGFSTAEASNAFYRRNLAAGQKGLSIAFDLATHRGYDSDHPRVAGDVGMAGVAIDSIKDMRILFDRI PLDQMSVSMTMNGAVLPVLALYVVAAEEQGVRPEQLSGTIQNDILKEFMVRNTYIYPPAPSMRIIGDIFRFTAEKMPRFN SISISGYHMQEAGATQDLELGYTLADGVEYVRAGLAAGLSVDAFAPRLSFFWAIGMNFFMEVAKMRAARLLWAKLIKGFS PKTDKSLALRTHSQTSGWSLTAQDVFNNVVRTCVEAMAATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQLESGT TRVIDPWGGSYYVERLTHELAHKAWAHIQEVEALGGMTKAIEAGLPKLRIEEAAARTQARIDSGRQAIIGVNKYPPERED SIEILKVDNSAVREAQIARLRELRAERNAEDVRRKLDALTEAGRRGEGNLLALAIDAARAKATVGEISDALEKVFGRYEA TVRSVTGVYSSEAGKDAQGIIDAREKADAFLARFGRRPRILIAKMGQDGHDRGQKVIATAFADLGFDVDIGPLFQTPEES ARQAVENDVHVVGASSLAAGHLTLVPQLKQALKALGREDIMVVVGGVIPAQDYDALRAAGAAAIFGPGTVISKAAIELLD KLAASLEEEA
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates. This conversion most likely represents an important source of building blocks for polyketide antibiotic biosynthes
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=689, Percent_Identity=64.0058055152395, Blast_Score=924, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=693, Percent_Identity=62.3376623376623, Blast_Score=872, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=689, Percent_Identity=66.1828737300435, Blast_Score=947, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 79617; Mature: 79617
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPHVPDFSGIDFDAPETHSAAPMRDQQLRQAGEATRNAERWDTPEGIPVKPVYTREDME CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH GVEHLGSLPGLPPFVRGPYSTMYVQQPWTVRQYAGFSTAEASNAFYRRNLAAGQKGLSIA HHHHHHCCCCCCCHHCCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEE FDLATHRGYDSDHPRVAGDVGMAGVAIDSIKDMRILFDRIPLDQMSVSMTMNGAVLPVLA EEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHH LYVVAAEEQGVRPEQLSGTIQNDILKEFMVRNTYIYPPAPSMRIIGDIFRFTAEKMPRFN HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCC SISISGYHMQEAGATQDLELGYTLADGVEYVRAGLAAGLSVDAFAPRLSFFWAIGMNFFM EEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EVAKMRAARLLWAKLIKGFSPKTDKSLALRTHSQTSGWSLTAQDVFNNVVRTCVEAMAAT HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHC QGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQLESGTTRVIDPWGGSYYVERLTHEL CCCCCCCCCCCCHHHHCCCCCCHHHHCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHH AHKAWAHIQEVEALGGMTKAIEAGLPKLRIEEAAARTQARIDSGRQAIIGVNKYPPERED HHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC SIEILKVDNSAVREAQIARLRELRAERNAEDVRRKLDALTEAGRRGEGNLLALAIDAARA CEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHH KATVGEISDALEKVFGRYEATVRSVTGVYSSEAGKDAQGIIDAREKADAFLARFGRRPRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE LIAKMGQDGHDRGQKVIATAFADLGFDVDIGPLFQTPEESARQAVENDVHVVGASSLAAG EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHCCC HLTLVPQLKQALKALGREDIMVVVGGVIPAQDYDALRAAGAAAIFGPGTVISKAAIELLD HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHH KLAASLEEEA HHHHHHHCCC >Mature Secondary Structure MRPHVPDFSGIDFDAPETHSAAPMRDQQLRQAGEATRNAERWDTPEGIPVKPVYTREDME CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH GVEHLGSLPGLPPFVRGPYSTMYVQQPWTVRQYAGFSTAEASNAFYRRNLAAGQKGLSIA HHHHHHCCCCCCCHHCCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEE FDLATHRGYDSDHPRVAGDVGMAGVAIDSIKDMRILFDRIPLDQMSVSMTMNGAVLPVLA EEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHH LYVVAAEEQGVRPEQLSGTIQNDILKEFMVRNTYIYPPAPSMRIIGDIFRFTAEKMPRFN HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCC SISISGYHMQEAGATQDLELGYTLADGVEYVRAGLAAGLSVDAFAPRLSFFWAIGMNFFM EEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EVAKMRAARLLWAKLIKGFSPKTDKSLALRTHSQTSGWSLTAQDVFNNVVRTCVEAMAAT HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHC QGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQLESGTTRVIDPWGGSYYVERLTHEL CCCCCCCCCCCCHHHHCCCCCCHHHHCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHH AHKAWAHIQEVEALGGMTKAIEAGLPKLRIEEAAARTQARIDSGRQAIIGVNKYPPERED HHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC SIEILKVDNSAVREAQIARLRELRAERNAEDVRRKLDALTEAGRRGEGNLLALAIDAARA CEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHH KATVGEISDALEKVFGRYEATVRSVTGVYSSEAGKDAQGIIDAREKADAFLARFGRRPRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE LIAKMGQDGHDRGQKVIATAFADLGFDVDIGPLFQTPEESARQAVENDVHVVGASSLAAG EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHCCC HLTLVPQLKQALKALGREDIMVVVGGVIPAQDYDALRAAGAAAIFGPGTVISKAAIELLD HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHH KLAASLEEEA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8099072 [H]