| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762130
Identifier: 108762130
GI number: 108762130
Start: 2672961
End: 2674700
Strand: Reverse
Name: 108762130
Synonym: MXAN_2299
Alternate gene names: NA
Gene position: 2674700-2672961 (Counterclockwise)
Preceding gene: 108763256
Following gene: 108760856
Centisome position: 29.26
GC content: 68.56
Gene sequence:
>1740_bases GTGGGCGGGAAACGCTTTCCAAGGATGTTCCTGGCGGGAGTCGCGGGGCTGATGGTGGCGTGTGGTGGCGACTCCGGAAG CCGTGGCCTTCCGGACCCCGCCAGCGAGCCCCCTGACAACGGGACGCTTCCCGACGCAGGCCTGCCCACGAACGGCACGG ACGGAGGGACGACACCCGACGCGGGAACCGGCCCAGGTCCCCCTGACGGCGGCGAGCCCGACGGCGGCCCACCGCCGCAG TCCAACCTCTGTGAGCCCACCGCGGGCGAGCCACGCTGGGTGCTCGAAGGCGAGCCCGTCTCCGCCACCGTGACGTGCAC CACCGGCCATGCCGCGCCGGACACGCGCTTCGTCGTGGACAACCTGCCGCCCGGCGCCCGGTTCGATGCGGCCACGGGCA CCCTGAGCTGGACGCCCGGCAAGGACCAGGCCGCCGTGTGGCACCTCACGCTCCGGGAAGAGAGCACCGGCGAGACGGGC ACGCTCAAGGTCGGCGTGGCGGAGAACGAGTCCGCGCCCGGCAACGTCCCCATCGTCGACCCGGCGGCCTACACGGAGGA GTTCGGCCTGCCGGTGTTCCACCTCTCCTACGAGGGCGGTTTGACGGCGGGCGGCTACCTGCCGGTGCAGCTCGTCTACC GGGGCCAGCGCTTCGACCTGGAGGCGAAGTACCGGGGCGCCACCTCCAGTGTGTTTCCCAAGCGCAGCCTCACGCTGAAA TTCCCGGACGAGGACCTGTTCACCGAGCCTGTCTTCGGAAACGGCTTCGAGGACCGCAAGCGCGTGGTGCTCATCACCAC GTTCAATGACAACTCCTACATTCGCTCACGGCTCGCCTTCGACGTGTGGAGCCGGATGAGCCCGGGCCATATCCACCTGC GCACCTACAGCGCGGTGCTCTACGCCAACAACAAATACGTCGGCCTTTACACGGCTGCGGACCACGTCAACAAACGCCTG ATGGCCGCGCACGGCATCGACAAGGACGCGGACGCCTTCAAGGCCGTGGACCACCGCGCCAACTTCTCGCGCCTGCGCAA AGACGGCACGACCAAGAGCAGCCTCCACGAAGGCTTCGAAAAGTCGGAGGGCGATCCCGAGGAAGGCGAGCCTGGCGCCT TCGCGCCCATGGAGGCGCTCACCGCCTTCATCGCGGACTCGAACGCGGACGCCTTCCGCGCCGGCTTCCCGCAGCGGATG AATGCGCGGGACTACGAAGACTGGTGGATCTTCAACACGCTCATCCTGGGCGTGGACTCGCAGGCGAAGAATGCCTACCA CGCCTACGACCCGGCCACCGGCGGCCCCTGGCGCTTCATCCCCTGGGACTTGGACGCGAGCTTCGGGCAGACCTACGACA CCACCCGGACCTCACCCACGGCGCGGCCCAATTTCCGGGCGGACAACCTGCTCTTCCAGCGCATGCTGGCCGACCCCACC ATCGCCGGGCCCTTGCGCGAGCGCTACCGGGCGCTGCTGCACGGCAGCCTGAACGTGGAGGTCATGCAGGCCCTCATCGA CGGCTACGTCCAGGAGACGGCGCCTTCCGCGCGGCGTGACTGGGCGAAGTGGGGCGCCAAGCACCGCGCCTTCGGCGACC CGAATGACCCGTGGGGCGGCCATGGCAACTTCCCCCACTGGCACACGCGCAAGGACTTCAACTCCTACGAGAAGGAAATC GAGTACGTGCGCCAGTGGATTCGGACCCGCTGGGACGCGCTGGAGAGCCAGTTGCCCTGA
Upstream 100 bases:
>100_bases CGAACCGACAACGCCGGCACCGCGGGGGGTGCCAGGCGCGTCACGGAATGGTTAATCCTGCGAGCCGTGACGGGGCGTTG TTCGAGGGGGGAGGGCTCAG
Downstream 100 bases:
>100_bases ACGGGCGGGTGTCCCCTCCCTCGGTGGAGGGGACACTCGGACGGCGGTTTAGAACGCCGCGGAGCCCGGCACGCGCGGGT AGGGAATCGCGTCCCGGATG
Product: putative lipoprotein
Products: NA
Alternate protein names: Spore Coat Protein H; Spore Coat Assembly Protein-Like Protein; Spore Coat Protein CotH; Lipoprotein
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MGGKRFPRMFLAGVAGLMVACGGDSGSRGLPDPASEPPDNGTLPDAGLPTNGTDGGTTPDAGTGPGPPDGGEPDGGPPPQ SNLCEPTAGEPRWVLEGEPVSATVTCTTGHAAPDTRFVVDNLPPGARFDAATGTLSWTPGKDQAAVWHLTLREESTGETG TLKVGVAENESAPGNVPIVDPAAYTEEFGLPVFHLSYEGGLTAGGYLPVQLVYRGQRFDLEAKYRGATSSVFPKRSLTLK FPDEDLFTEPVFGNGFEDRKRVVLITTFNDNSYIRSRLAFDVWSRMSPGHIHLRTYSAVLYANNKYVGLYTAADHVNKRL MAAHGIDKDADAFKAVDHRANFSRLRKDGTTKSSLHEGFEKSEGDPEEGEPGAFAPMEALTAFIADSNADAFRAGFPQRM NARDYEDWWIFNTLILGVDSQAKNAYHAYDPATGGPWRFIPWDLDASFGQTYDTTRTSPTARPNFRADNLLFQRMLADPT IAGPLRERYRALLHGSLNVEVMQALIDGYVQETAPSARRDWAKWGAKHRAFGDPNDPWGGHGNFPHWHTRKDFNSYEKEI EYVRQWIRTRWDALESQLP
Sequences:
>Translated_579_residues MGGKRFPRMFLAGVAGLMVACGGDSGSRGLPDPASEPPDNGTLPDAGLPTNGTDGGTTPDAGTGPGPPDGGEPDGGPPPQ SNLCEPTAGEPRWVLEGEPVSATVTCTTGHAAPDTRFVVDNLPPGARFDAATGTLSWTPGKDQAAVWHLTLREESTGETG TLKVGVAENESAPGNVPIVDPAAYTEEFGLPVFHLSYEGGLTAGGYLPVQLVYRGQRFDLEAKYRGATSSVFPKRSLTLK FPDEDLFTEPVFGNGFEDRKRVVLITTFNDNSYIRSRLAFDVWSRMSPGHIHLRTYSAVLYANNKYVGLYTAADHVNKRL MAAHGIDKDADAFKAVDHRANFSRLRKDGTTKSSLHEGFEKSEGDPEEGEPGAFAPMEALTAFIADSNADAFRAGFPQRM NARDYEDWWIFNTLILGVDSQAKNAYHAYDPATGGPWRFIPWDLDASFGQTYDTTRTSPTARPNFRADNLLFQRMLADPT IAGPLRERYRALLHGSLNVEVMQALIDGYVQETAPSARRDWAKWGAKHRAFGDPNDPWGGHGNFPHWHTRKDFNSYEKEI EYVRQWIRTRWDALESQLP >Mature_578_residues GGKRFPRMFLAGVAGLMVACGGDSGSRGLPDPASEPPDNGTLPDAGLPTNGTDGGTTPDAGTGPGPPDGGEPDGGPPPQS NLCEPTAGEPRWVLEGEPVSATVTCTTGHAAPDTRFVVDNLPPGARFDAATGTLSWTPGKDQAAVWHLTLREESTGETGT LKVGVAENESAPGNVPIVDPAAYTEEFGLPVFHLSYEGGLTAGGYLPVQLVYRGQRFDLEAKYRGATSSVFPKRSLTLKF PDEDLFTEPVFGNGFEDRKRVVLITTFNDNSYIRSRLAFDVWSRMSPGHIHLRTYSAVLYANNKYVGLYTAADHVNKRLM AAHGIDKDADAFKAVDHRANFSRLRKDGTTKSSLHEGFEKSEGDPEEGEPGAFAPMEALTAFIADSNADAFRAGFPQRMN ARDYEDWWIFNTLILGVDSQAKNAYHAYDPATGGPWRFIPWDLDASFGQTYDTTRTSPTARPNFRADNLLFQRMLADPTI AGPLRERYRALLHGSLNVEVMQALIDGYVQETAPSARRDWAKWGAKHRAFGDPNDPWGGHGNFPHWHTRKDFNSYEKEIE YVRQWIRTRWDALESQLP
Specific function: Unknown
COG id: COG5337
COG function: function code M; Spore coat assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63441; Mature: 63310
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGKRFPRMFLAGVAGLMVACGGDSGSRGLPDPASEPPDNGTLPDAGLPTNGTDGGTTPD CCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGTGPGPPDGGEPDGGPPPQSNLCEPTAGEPRWVLEGEPVSATVTCTTGHAAPDTRFVVD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEE NLPPGARFDAATGTLSWTPGKDQAAVWHLTLREESTGETGTLKVGVAENESAPGNVPIVD CCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEC PAAYTEEFGLPVFHLSYEGGLTAGGYLPVQLVYRGQRFDLEAKYRGATSSVFPKRSLTLK CHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCEEEE FPDEDLFTEPVFGNGFEDRKRVVLITTFNDNSYIRSRLAFDVWSRMSPGHIHLRTYSAVL CCCHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEE YANNKYVGLYTAADHVNKRLMAAHGIDKDADAFKAVDHRANFSRLRKDGTTKSSLHEGFE EECCEEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KSEGDPEEGEPGAFAPMEALTAFIADSNADAFRAGFPQRMNARDYEDWWIFNTLILGVDS HCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHEEEEEEEEECCC QAKNAYHAYDPATGGPWRFIPWDLDASFGQTYDTTRTSPTARPNFRADNLLFQRMLADPT HHCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC IAGPLRERYRALLHGSLNVEVMQALIDGYVQETAPSARRDWAKWGAKHRAFGDPNDPWGG CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC HGNFPHWHTRKDFNSYEKEIEYVRQWIRTRWDALESQLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GGKRFPRMFLAGVAGLMVACGGDSGSRGLPDPASEPPDNGTLPDAGLPTNGTDGGTTPD CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGTGPGPPDGGEPDGGPPPQSNLCEPTAGEPRWVLEGEPVSATVTCTTGHAAPDTRFVVD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEE NLPPGARFDAATGTLSWTPGKDQAAVWHLTLREESTGETGTLKVGVAENESAPGNVPIVD CCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEC PAAYTEEFGLPVFHLSYEGGLTAGGYLPVQLVYRGQRFDLEAKYRGATSSVFPKRSLTLK CHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCEEEE FPDEDLFTEPVFGNGFEDRKRVVLITTFNDNSYIRSRLAFDVWSRMSPGHIHLRTYSAVL CCCHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEE YANNKYVGLYTAADHVNKRLMAAHGIDKDADAFKAVDHRANFSRLRKDGTTKSSLHEGFE EECCEEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KSEGDPEEGEPGAFAPMEALTAFIADSNADAFRAGFPQRMNARDYEDWWIFNTLILGVDS HCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHEEEEEEEEECCC QAKNAYHAYDPATGGPWRFIPWDLDASFGQTYDTTRTSPTARPNFRADNLLFQRMLADPT HHCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC IAGPLRERYRALLHGSLNVEVMQALIDGYVQETAPSARRDWAKWGAKHRAFGDPNDPWGG CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC HGNFPHWHTRKDFNSYEKEIEYVRQWIRTRWDALESQLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA